Difference between revisions of "Os01g0923600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0923600| Description = CG-1 domain containing protein| Version = NM_001051775.1 GI:115441920 GeneID:4327253| Length = 5915 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0923600|
 
GeneName = Os01g0923600|

Revision as of 19:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0923600

Description

CG-1 domain containing protein

Version

NM_001051775.1 GI:115441920 GeneID:4327253

Length

5915 bp

Definition

Oryza sativa Japonica Group Os01g0923600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42192182..42198096

Sequence Coding Region

42192369..42192384,42192949..42193074,42193181..42193296,42193595..42193683,42194347..42194392
,42194736..42195204,42195313..42195440,42195670..42196373,42196493..42197033
,42197141..42197440,42197655..42197756

Expression

GEO Profiles:Os01g0923600

Genome Context

<gbrowseImage1> name=NC_008394:42192182..42198096 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42192182..42198096 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcaccagcaaggatttgatacacacaggctacaccaggaagtaaaatcgcggtggttaaagcctaaagaggttctgcagatattgcagaatcatgatcggttcatcatcacacataagactcctcataagccaccgagtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatgatgggtatgaatggcgaaaaaagaagaatgggaagactattgctgaagcccatgagcgccttaaggttgataatgttgatgcactgaattgctactatgcacacgcagacaaaaactctacatttcagaggcgtatatattggatgcttgatccggcttatgatcacatagtttttgtccactacagagatgttcaagagggcagcatttcagtatcagcactgaatgattcatcaacatccaatcagaatggcagtggtagcagagctgaggctcaaagttcacccggattgactagcgagctatttgccccatgtcttaattcatgcagtccaggatctgcggaagaagttagttcccagattatggccataaacaacgaaacaaatagcgttagtcaacctgattgggttcaacattgtaatcaggcagcgctgcgaaaacttaaggtgcagctgagtctggaagatagggaagatcatgatgtcgatgccaaagatattccatcaaacagtgaacctatcactgtgtatgggattcagaatgaagaaccaggcacttgtagaaatcttgcagatgtttttagtggactggagttcagcaaagaaaatcatcctgaagaaaccggactccctttttccagcactattgatgtgctgaaaaattcagacacttggttggaggaggatcagattgaagcaattctgcattcagcatctatgatagtgactgaaaaccaatggttcaatattcgtgaggtttccccagaatggtcctattgttctgaaagtacaaaggttatcattgcaggagacttccttcgtgatccctctcatggttcatgggcaatagtatttggcgatgttaaggtacatgcagaaattgttcagcaaggtgtcattcgttgccatactccatgccttgatgctagaaaagtgacaatgtacttgattgatgaaaatgagaaagcctgcagtgaagcacgacaattcgaattccataataagcctaccaaaagtgtggtttgtgagaacaggaaaccctgcagagaagtacatgaatctgaactccatcagaggcctactgaaagcaacaatgagctattgttgctttttaactatgctcagttgcttttcgatggtcatgtttctgagcaatttttaaagtttggcttgccattcccaaatcttgaatgcggactccaagttagcccatctgaaattatgaagggggcatctgagcggctgaaccgtgacaccgcagtaaattgtgtcatggaagtactgcttaacaacaagtttgaagagtggctgttttctaaatatgaacaaaatagtgaagggaatcattttctccctaggcaataccatggtgttatacatacaattgctgccttggggtacaactgggctttgaaacttctgcttaattcaggtgtacttgtaaactaccgtgatgcaaatggatggactgctttacattgggctgcacgatttggcagggaagagacggtagtgctccttcttgatgcaggtgccgcagctggtgcactgtcagacccaacagcacaagatcctgctgccaaaacacctgcttcagtagcttctgcatatggtttcaagggcctttctgcgtatctttcagaagcagaactaatagctcatcttcattctctcgaatcaaaagaaaacgggtcttctggagatcaaatatcaagagttgtgggcagaatatcagacacatctgcccatgcacaaagtggtagcgatgatcagcttgcactgaaggaatccctaggagctatgcgatatgctgttcaagctgccgggcgcatacaaactgccttccgtattttttccttcaggaagaaacaacaagcaggtcttcagaatagaggtaaccacattatatccattcgtgaggtaggtgctgcttcacacggtatgcttgagaaagccgcgttatctatccagaagaacttcaggtgctggaagaaacgcaaagaatttctgaaaatacgcaaaaatgtcatcaagatacaggcgcgtgtcagagctcatcaacaacataacaagtacaaggagttacttcgaagtgtgggcatccttgagaaggtcatgcttagatggtaccgaaagggtgttggtttacgaggattccaccctggggcaatagcaatgccaatcgatgaagaggacgaagatgacgtagccaaggttttccggaagcaaagagtggaaacagctctcaacaaagctgtttcaagggtatcatcgatcatcgacagtcctgtcgcgagacagcaataccgaaggatgctcaaaatgcacaaacaaaacaaggatgatgatgaaaaagtagaagtttctccagcatctcatgtttatggcagtggcagtcatcacatgtgttggctaagccacaacaacaaagcaatgcactag</cdnaseq>

Protein Sequence

<aaseq>MQHQQGFDTHRLHQEVKSRWLKPKEVLQILQNHDRFIITHKTPH KPPSGAWFLFNRRVLRYFRNDGYEWRKKKNGKTIAEAHERLKVDNVDALNCYYAHADK NSTFQRRIYWMLDPAYDHIVFVHYRDVQEGSISVSALNDSSTSNQNGSGSRAEAQSSP GLTSELFAPCLNSCSPGSAEEVSSQIMAINNETNSVSQPDWVQHCNQAALRKLKVQLS LEDREDHDVDAKDIPSNSEPITVYGIQNEEPGTCRNLADVFSGLEFSKENHPEETGLP FSSTIDVLKNSDTWLEEDQIEAILHSASMIVTENQWFNIREVSPEWSYCSESTKVIIA GDFLRDPSHGSWAIVFGDVKVHAEIVQQGVIRCHTPCLDARKVTMYLIDENEKACSEA RQFEFHNKPTKSVVCENRKPCREVHESELHQRPTESNNELLLLFNYAQLLFDGHVSEQ FLKFGLPFPNLECGLQVSPSEIMKGASERLNRDTAVNCVMEVLLNNKFEEWLFSKYEQ NSEGNHFLPRQYHGVIHTIAALGYNWALKLLLNSGVLVNYRDANGWTALHWAARFGRE ETVVLLLDAGAAAGALSDPTAQDPAAKTPASVASAYGFKGLSAYLSEAELIAHLHSLE SKENGSSGDQISRVVGRISDTSAHAQSGSDDQLALKESLGAMRYAVQAAGRIQTAFRI FSFRKKQQAGLQNRGNHIISIREVGAASHGMLEKAALSIQKNFRCWKKRKEFLKIRKN VIKIQARVRAHQQHNKYKELLRSVGILEKVMLRWYRKGVGLRGFHPGAIAMPIDEEDE DDVAKVFRKQRVETALNKAVSRVSSIIDSPVARQQYRRMLKMHKQNKDDDEKVEVSPA SHVYGSGSHHMCWLSHNNKAMH</aaseq>

Gene Sequence

<dnaseqindica>188..203#768..893#1000..1115#1414..1502#2166..2211#2555..3023#3132..3259#3489..4192#4312..4852#4960..5259#5474..5575#gacgaaaatgccactcactttccccacacgcgttcgtcactccaagctcgatgtctctcccccgccgctttggatcaatcgtcagcgactcaccattcggcgactcggccattgacagcgatagtcgcacgggttcttgcttatttggatccgttcttccggggagcgagctaaccgggcgagcgagatgcagcaccagcaaggtaagggctggttcttgggtgcctcgatccatacttgcaatctttcgttgcttatatgtgattcttgcagctaagtttggttctgagtaaccgggctggtgggttagggtttgggggaaatcaagaaggcgcaagtggtccatattttcttggtaaattgttaggactattagtttggaatgtactgctgctttcgtagttcatgttcttacaagttagtgcgattactgttgaatgaacgatttgattcaaggggagacttggaaagggggaggacagggggtttaaggtcgatgaaattcgtcaaattgcttgatttctattgcgggagatgaccgtgaatttcttgttaggtactcagtcgctgtagagtagttgtaggtgcatcaatttattggtgctgcataggcaatcagttcatatttaatgtttgtttttttttgggtatggtcgatgattcagtgaatgctttatattatgatccttgagtcattgtcatatgctgtgaatgccttcgatatctccgagtagtaaagattgttgctctttgttttaccttctcaggatttgatacacacaggctacaccaggaagtaaaatcgcggtggttaaagcctaaagaggttctgcagatattgcagaatcatgatcggttcatcatcacacataagactcctcataagccaccgagtaataaagttctttgggtttagcttctgagatacttgtttcaagcttgcacttacttcgttttagccctgaatacccctttaccgagtcgattctggaactgcaggtggtgcttggtttcttttcaaccgtagagttcttcggtacttcagaaatgatgggtatgaatggcgaaaaaagaagaatgggaagactattgctgaagcccatgagcgccttaaggtttgctttgcacactcatgttttgttgaacagtcagtcatgttatgatgtaggtaaaagatttttctgaagtaatcaaattggtatttaagccaacaagtagtcaaaagaaaaaaaaatgtttctaattcatagtatgctcaaagtcaaagggatcgtctctgtggcaagacaataggtcaatgtctattatgactgttgctgttaggactgaaccagataaagtggatagcaaccggcaatcagcattatggcatataattaatatgtttttctcatttaacactggaaatttcaggttgataatgttgatgcactgaattgctactatgcacacgcagacaaaaactctacatttcagaggcgtatatattggatgcttgatccgtaagaactatttttacttgcgcaagaaagtattttatacatactatgccatccttttacaattttcaaaggttttacatggaattctgtcatgttccatactttttgtaaaatatagctgtttttttcttagagcacaaccaataacaaaaatttgttggccatgcgcatgttactcatggaggaacttatatcacgctacgcatagcgcttttttttttttggagcaagtcttgtttacaagctatctatgttgagatctccatgtatttgtgttacttgaatcacattcttgagagactgcaccctttcctatggattctctaaaaaaacattttcttctagatatattataatttgtactattcagtattctgcaaggattgtagacattttctgatgttgcaaaatgctgtaagaaatcatctttgcgttccattcctggcgctgcatttcctaaactaatgaatttgatacactgttggtcttgttccttgtcctaaacgatgagttctaacaaaaatgaaaaaatatttctgctgttcgttatgttctatgacatttttgttttattaaatactgttggataatacttaaaccaacttacaccataatttttcgccaggctgaacttacaccataatgagcaatttgtctttgcagggcttatgatcacatagtttttgtccactacagagatgttcaagaggtcagcctccttgttttgcattccttttattaatgtgcatctgcaattcatggtggatcaccaattacttcgctttactaggcacagatatgtatccacttcagctgtcagcaatttgacaggccaaaactggacttggatatatctttgaacatatcagattatttaatcaccagcaccaagcacctatgatttgaatttgacagtgtgtactctctcaccaattaactcaattagtcgcataccaggctagcacatgtaatgttgttgttgtgattggaggcaccccaattaaattttggcatctcatgggccacacctttatttgttgattgcttatcagggcagcatttcagtatcagcactgaatgattcatcaacatccaatcagaatggcagtggtagcagagctgaggctcaaagttcacccggattgactagcgagctatttgccccatgtcttaattcatgcagtccaggatctgcggaagaagttagttcccagattatggccataaacaacgaaacaaatagcgttagtcaacctgattgggttcaacattgtaatcaggcagcgctgcgaaaacttaaggtgcagctgagtctggaagatagggaagatcatgatgtcgatgccaaagatattccatcaaacagtgaacctatcactgtgtatgggattcagaatgaagaaccaggcacttgtagaaatcttgcagatgtttttagtggactggagttcagcaaagaaaatcatcctgaagaaaccggactccctttttccagcactattgatgtgctgaaaaattcaggtgcaataatgccgctcattccaattcttccattgacaattactattttagatacagtggtcatctatctaaatatgtaattttttgcatgaatgtcttcttgcttagacacttggttggaggaggatcagattgaagcaattctgcattcagcatctatgatagtgactgaaaaccaatggttcaatattcgtgaggtttccccagaatggtcctattgttctgaaagtacaaaggtaccatatgatggtagacattaacattctagattaagctatgcatcttaccttcttcatgtggcatttaagactatatatacattatgagcattcatgaaattcgagttcatatattgccacaatgacagaagtcttgtccatttggttaatcttgttttgagacaatctgccagtggtattgcaggctacagaaattaattggagatctataaaaaatgtaatgcaggttatcattgcaggagacttccttcgtgatccctctcatggttcatgggcaatagtatttggcgatgttaaggtacatgcagaaattgttcagcaaggtgtcattcgttgccatactccatgccttgatgctagaaaagtgacaatgtacttgattgatgaaaatgagaaagcctgcagtgaagcacgacaattcgaattccataataagcctaccaaaagtgtggtttgtgagaacaggaaaccctgcagagaagtacatgaatctgaactccatcagaggcctactgaaagcaacaatgagctattgttgctttttaactatgctcagttgcttttcgatggtcatgtttctgagcaatttttaaagtttggcttgccattcccaaatcttgaatgcggactccaagttagcccatctgaaattatgaagggggcatctgagcggctgaaccgtgacaccgcagtaaattgtgtcatggaagtactgcttaacaacaagtttgaagagtggctgttttctaaatatgaacaaaatagtgaagggaatcattttctccctaggcaataccatggtgttatacatacaattgctgccttggggtacaactgggctttgaaacttctgcttaattcaggtgtacttgtaaactaccgtgatgcaaatggatggactgctttacattgggctgcacgatttggcaggtatttgaagctttgtatgctaaatgtaaaccctagcataatttggagaagttgactccttgtgccaacttctgctaatctgattttctcctgtcttgttcatgataaaaaaccaacagggaagagacggtagtgctccttcttgatgcaggtgccgcagctggtgcactgtcagacccaacagcacaagatcctgctgccaaaacacctgcttcagtagcttctgcatatggtttcaagggcctttctgcgtatctttcagaagcagaactaatagctcatcttcattctctcgaatcaaaagaaaacgggtcttctggagatcaaatatcaagagttgtgggcagaatatcagacacatctgcccatgcacaaagtggtagcgatgatcagcttgcactgaaggaatccctaggagctatgcgatatgctgttcaagctgccgggcgcatacaaactgccttccgtattttttccttcaggaagaaacaacaagcaggtcttcagaatagaggtaaccacattatatccattcgtgaggtaggtgctgcttcacacggtatgcttgagaaagccgcgttatctatccagaagaacttcaggtgctggaagaaacgcaaagaatttctgaaaatacgcaaaaatgtcatcaagatacaggtgagtaacatttgcagaaatagctagaatgtattctgttgcattatttgtttgaagtcttttgaaggttttgtacagctgatatagtactccctcttttatgataggcgcgtgtcagagctcatcaacaacataacaagtacaaggagttacttcgaagtgtgggcatccttgagaaggtcatgcttagatggtaccgaaagggtgttggtttacgaggattccaccctggggcaatagcaatgccaatcgatgaagaggacgaagatgacgtagccaaggttttccggaagcaaagagtggaaacagctctcaacaaagctgtttcaagggtatcatcgatcatcgacagtcctgtcgcgagacagcaataccgaaggatgctcaaaatgcacaaacaaaacaaggtgagattacaaaccttgcaaaccattcaatatgattcaattaaagtttgaattaacatacttggttctatagcaaaacctcgctctacggaaaacatttcgtgcaagtaaaatgtacacaaaatttcaacgttggctcactgaaatgttccttattccaatcacaggatgatgatgaaaagtaggactgaaatgttcctttttccaatcacaggatgatgatgaaaaagtagaagtttctccagcatctcatgtttatggcagtggcagtcatcacatgtgttggctaagccacaacaacaaagcaatgcactagctggccagtattgccatgtccgaccttgttaaatgatctgacgagcagttggccttatgaagaacagtaaatccttggcgattcactgtgcagcgaatcctgaaaaaccagaggaatttatcgatgatccagtaccatcactggttcttcttgcccttgctctgaaaaaatgtgttttaccttttgtacataagaaaaatcatgtgcaaagctgactcttggccaatattcagaaaaggtgtaccctctttgcatttgttacccttgtgtatatggtaatgaatgtgtggtgaatctttaaagtgaagcttattgcgaatgagagtacccgatcttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0923600, RefSeq:Os01g0923600