Difference between revisions of "Os01g0949400"

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(Created page with "{{JaponicaGene| GeneName = Os01g0949400| Description = Similar to Phytochromobilin synthase precursor| Version = NM_001051934.1 GI:115442238 GeneID:4325761| Length = 2690 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0949400|
 
GeneName = Os01g0949400|

Revision as of 19:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0949400

Description

Similar to Phytochromobilin synthase precursor

Version

NM_001051934.1 GI:115442238 GeneID:4325761

Length

2690 bp

Definition

Oryza sativa Japonica Group Os01g0949400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43617245..43619934

Sequence Coding Region

43617374..43617562,43617660..43617710,43617853..43617956,43618122..43618254,43618340..43618433
,43618544..43618638,43619069..43619188,43619760..43619879

Expression

GEO Profiles:Os01g0949400

Genome Context

<gbrowseImage1> name=NC_008394:43617245..43619934 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43617245..43619934 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagcggcggcgtcggcggcgggagcttgggcgccggcttgctgtaccacaagttcgtcagcttcgcgctggaggagacccgactccggaccaccctcacccctcacccctcccaggaaaagttcaagtctataaaacccaatgatgataatacagttttcaatgctctctcattcagtgcaccgaaaattagattgcttcgcagcttgacaatcgagaagaaaaactcatatcaggttcttgactttgccgctttctctgaacctgaatacgatcttcctatattttgcgccaacgtttttacaactcatgcacaaagtattgttgtattggacctcaatcctctatatgatactacagtgcacaaggattacaaagataagtactataggagtataatgcctcttgtacacaagtataacgagcttcttccttggggtggcaagattacgagtgagtcattgaagttcttctctccaattgtgatctggacaatatttgagtcaactgaacacaaccaccatgttctacattcagctttcgtggattattataaggtctggcttgaattaatggaccaagcaattaaagaaaataacaaagcaacaattgctcgtaaccaagaagaacaacataaatatctcacatggagggctgagaaggatcctggctatccccttttgaagaagttaattggtgaaagtcgtgccgaggatctggtgatggagtttctgtttgaaggagtaaatactcttggaacaaaatcatttctggattatttccctgaatacgcccgtgatgatgggtcagtgaacaagaaaaggagtatgatcggcaagtcttttgaaactaggccttgggacgccaatggagaattcattggcgatgccgaagcacagtaa</cdnaseq>

Protein Sequence

<aaseq>MSSGGVGGGSLGAGLLYHKFVSFALEETRLRTTLTPHPSQEKFK SIKPNDDNTVFNALSFSAPKIRLLRSLTIEKKNSYQVLDFAAFSEPEYDLPIFCANVF TTHAQSIVVLDLNPLYDTTVHKDYKDKYYRSIMPLVHKYNELLPWGGKITSESLKFFS PIVIWTIFESTEHNHHVLHSAFVDYYKVWLELMDQAIKENNKATIARNQEEQHKYLTW RAEKDPGYPLLKKLIGESRAEDLVMEFLFEGVNTLGTKSFLDYFPEYARDDGSVNKKR SMIGKSFETRPWDANGEFIGDAEAQ</aaseq>

Gene Sequence

<dnaseqindica>2373..2561#2225..2275#1979..2082#1681..1813#1502..1595#1297..1391#747..866#56..175#acttgccactgaagagtggctgcttgcaggcttggcttgcagctggggagagagcatgagcagcggcggcgtcggcggcgggagcttgggcgccggcttgctgtaccacaagttcgtcagcttcgcgctggaggagacccgactccggaccaccctcacccctcacccctcccaggttcttcttcttgttgttcttcctaccttagcatgctccttgcagcaaaacaaaatctagctcatgttcttgcaacctagtagagtctactgttagctacttggttcaaatactggtgaactactaggtgcccttggtttgatgatttttttttctgtctgaaaaacaaaattgtaatagttgtgagctagagctaccactacgaccatactgttgcgattggtcgttacctgatgattttttttttttgctattgtagaccagcactgggaaacctagctttcatatgtgaacaaattaatcccttgtaaacaatgacataacctaatcgttgtttctttagtcgcaaccaagtgattgtgattacttgtttaatcttgtgaagaagcaggctaccaagcatagacatttgattgtgcaatttatttatttatagtagtatctatcagagctatgtcgcccaatagtggcagctagcttcaaccatgtttctaagccctgtctcaggctgtcaatatttctgtctcatgtaaatgtaagtagttgaccttgtattgttttatgcttccaggaaaagttcaagtctataaaacccaatgatgataatacagttttcaatgctctctcattcagtgcaccgaaaattagattgcttcgcagcttgacaatcgagaagaaaaactcatatcaggtatttaatctatgttggggatttctgttcaagtttacttgatcaaaactctcttaacaataccacaagtccacaatgttgctttccctgacttatctcctattcccctgtgctttaaacattgtcctggttctgcttcattgtgatttggaacgtttatatccagtcatagttctacaacacgatccacgttaaatctttcgttgatctttcactgaaaaaaaaaatgtattgctttgatttgatcaatttatgactattctttttctacaatgcaacaaattaaaagtgttgacccgccagcttacgtcatgttttaccattctccatataacatgtgaagagttttgcttgctagttacaattgaatgccccatatctctatctaggaaaatgctccactatacttacaatgcatattcctatgcaggttcttgactttgccgctttctctgaacctgaatacgatcttcctatattttgcgccaacgtttttacaactcatgcacaaagtattgttgtattgtaagtgtcagagaatagttgctgttgcaaggaaaagtattgttggctttcttccttgcctaaaacctaatggatatgagccctgaacgaacaattcaaactatctgcagggacctcaatcctctatatgatactacagtgcacaaggattacaaagataagtactataggagtataatgcctcttgtacacaagtataacgaggtacatggatctttcctggctccacccaacctattgcctcataaattgttatttagctcgatatctttatttagaggatatgcagcttcttccttggggtggcaagattacgagtgagtcattgaagttcttctctccaattgtgatctggacaatatttgagtcaactgaacacaaccaccatgttctacattcagctttcgtggattattataaggcaagaccagactatttctttaaattttctcaaaaagtttaagagaaacacgaaatttgaacaagtttcctgcccttgttttgtcaatgtgaattttggactgaatttcttgaaggattattctcttgtgtgcagccatcaaatctgaatattctcactatgtaggtctggcttgaattaatggaccaagcaattaaagaaaataacaaagcaacaattgctcgtaaccaagaagaacaacataaatatctcacatggagggctgagaaggttgtttttttattccatcagaatcagatatcactttagaaaattatactcggagacttgagtattacttgcctcattctgctactcatccattggtgttatgaaagatactatgttgatcttgtgcatcctctatgtgcaggatcctggctatccccttttgaagaagttaattggtgaaagtcgtgccgaggttttgtctgggccatcactacatttatacttacttttgacttatattctgtgtggtgttatttgaattttgaggtatgtatcatcttgacaatcaggatctggtgatggagtttctgtttgaaggagtaaatactcttggaacaaaatcatttctggattatttccctgaatacgcccgtgatgatgggtcagtgaacaagaaaaggagtatgatcggcaagtcttttgaaactaggccttgggacgccaatggagaattcattggcgatgccgaagcacagtaaaatgttcgctacgcctttcggcctgatcaatctctcttatgcttgtagtactgttttctttttttttagaaaacttacatttttcatgctcatatccctgaacttggattgaataagaagagattggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0949400, RefSeq:Os01g0949400