Difference between revisions of "Os01g0959000"

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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0959000|
 
GeneName = Os01g0959000|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0959000

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001051993.1 GI:115442356 GeneID:4325394

Length

5002 bp

Definition

Oryza sativa Japonica Group Os01g0959000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44070389..44075390

Sequence Coding Region

44070465..44070643,44071485..44071598,44072009..44072097,44072937..44072983,44073064..44073144
,44073225..44073387,44073565..44073808,44073888..44073956,44074179..44074310
,44074404..44074476,44074882..44074919,44075008..44075077

Expression

GEO Profiles:Os01g0959000

Genome Context

<gbrowseImage1> name=NC_008394:44070389..44075390 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44070389..44075390 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagccgcgccgcggccgctccgcctcgcgctcctcctcgggatcctcctctcgctcgccgtcccgctccgcctcctcgggctccggctcctcccggtcgcgctcccgctcccgctccttctcgtcgtcgtcgtccccttcacggagccgctccccacccgctgccaaggccagctcacctggggcacggagaggtcgatctccttcatcccctgctaagagaggatcgccatcaaagaaagggcgttcaccatcaccaccaccacctaaaaaggcttcacctcctaggaaagcatctcctgctcctgaatcagttgttctccacattgatcatttgtccaggaatgttaatgaagctcatttgaaagagatattcggaaactttggtgaagtggttaacgtggagctatccatggatcgaatggtcaaccttcctcgtgggtatggatatattgagttcaagaagagaactgatgctgagaaagctcttctttacatggacggcggtcaaattgatgggaatgttgtgaagttgagattcacacttgcaccacggcaaagggcttcttcaccaatgaaggcgcctccccctcccccaaaaagagatgttcctcataatgagaaaggcgctcctagtgctgaaaaggatgtgcagcagcgcagggaaccatccccacgaaggaagccagcttcacctccacgcaaaagaactcctccaaaccgaaggattgaatctcccaggcggcaacctgatccatctcctaggcgtcgtcctgattctccacctattcgtcgtcgagcagatgcttcgcctgtcaggcgtggtgacacacctcctcgtcggagaccaggatctccagtgagaaggcgttctccctctccaccacctagaaggcgtagatcaccaatgcgtccttcacctaggaggcttcgtggaagcccatcaccacgcagacgctcccctgggcccattagacggcggtcaccaccaccacccccaaggcggccaagaagccctcctggaagaaggctaccacctccacgtcgtcatagccgttctcccccgcctcgtcgtccccctcattcacgttccagatcaatttctcctcgaaccaggcgaggacctccattgaggcgtggaaggtctgattcatcgtattctcgatcacccagtcctccaagaaagggaccaagaagggtatcaaggagccgcacccccccaaggcatcgtagaggaagaagcatctctagcgacagccggagcagcagctcaccttccccgaggcgcaggtag</cdnaseq>

Protein Sequence

<aaseq>MAKPRRGRSASRSSSGSSSRSPSRSASSGSGSSRSRSRSRSFSS SSSPSRSRSPPAAKASSPGARRGRSPSSPAKRGSPSKKGRSPSPPPPKKASPPRKASP APESVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTD AEKALLYMDGGQIDGNVVKLRFTLAPRQRASSPMKAPPPPPKRDVPHNEKGAPSAEKD VQQRREPSPRRKPASPPRKRTPPNRRIESPRRQPDPSPRRRPDSPPIRRRADASPVRR GDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPP PRRPRSPPGRRLPPPRRHSRSPPPRRPPHSRSRSISPRTRRGPPLRRGRSDSSYSRSP SPPRKGPRRVSRSRTPPRHRRGRSISSDSRSSSSPSPRRR</aaseq>

Gene Sequence

<dnaseqindica>77..255#1097..1210#1621..1709#2549..2595#2676..2756#2837..2999#3177..3420#3500..3568#3791..3922#4016..4088#4494..4531#4620..4689#cccctccctcagacgacccccgaccaaaaccctagcccccaaacccgcccatcggtcgcctccgccgccggagacgatggcgaagccgcgccgcggccgctccgcctcgcgctcctcctcgggatcctcctctcgctcgccgtcccgctccgcctcctcgggctccggctcctcccggtcgcgctcccgctcccgctccttctcgtcgtcgtcgtccccttcacggagccgctccccacccgctgccaaggccaggtgagaccccccgcctctcccccgcgatgccatctgcttacgtctttagatttgtattcttggcgtgctttgttcagagctgcgaatgcacgctgccgctctcggtctgggggtgttttaggtttggatttttgttctgcgcaatcgatggtgccgtcaagtacgatagtgtttttttttagtttttagcattgtgttagatttagtaatttctgcatatcttttgtaaaaacaacaggagctcaatagtagctttggtagttagttattccttagacctatttaggaagttgaagatggtattggacattgtttagacccaatttttctaggtacatattgcaatatgtgtatgtacatagaggattagaggtatttattctgttgcgtatgcgtcaaacagtataggcgtagtttaaccatttaagattggcttagtcttgatttccatcatgtccaaacatcacgaaaccgtgtctccgaagactacgagcaaccactatgtaactgagggaatattttattacaatgaatgacagtacagtcttgtaccccctgcagtagacttgctctataatacataggttacataggaaacttatctttctgaaacttatctccttgtatgtgaattcatttcgcctcatgttttttgttcttgtttctgctttcatttcctttcattgttgttactttgattccattagagtgtgcactaagatacttgagtacccttcatgctttctgctttcattaacctggatcattggtggttttcaatttaatttgcttgtcatctttgttctccctcacttacatatgggtgatattatatgtgcagctcacctggggcacggagaggtcgatctccttcatcccctgctaagagaggatcgccatcaaagaaagggcgttcaccatcaccaccaccacctaaaaaggcttcacctcctaggttcagttatacactgctttaatgcttatatgtttatagacatgctgtttgaagtttgagcttgctaatgttttatctgacttgaagtatttattcagaaacaactataatagtatgcatataatattaattgttgggcatcaatattttttcgtcgtaatatctatcgtgtttcgagctttgaactccttggttaacaaattacaaatagctgtagcttctgatactttttgttatttggcttctatgttgctatttgctcgtcatgtttcaattgtgatttatggtccctcttttttattttgctaaaaaaattatgccttattctgaaaccaacaacgttacaacatgcgctgttctcttgtcctctccatcctacaatattgaatagtggttatttattttttcaggaaagcatctcctgctcctgaatcagttgttctccacattgatcatttgtccaggaatgttaatgaagctcatttgaaagagatattcggtgagtttgtccttagattttcatgtgaataattcctactggaagtttagtgtcaatgtgatttcttgttgggagctggatactattactctgcatttgagggcaaatttaattttatctttgcattgaaaatattttccttttctgatagttaactgagataagctagctcatgtccttacaaactctgttagaactgttggcattgtgcattttgtgtgtgtttaaatatctaatgtatgctctgtggtttatgttttttacctgaaccctgtattgagagagtatccagttgtaaggttggtcaagtgctaatcacactggcctttttgctggtagattcgtattggtgtttttcttgcaatcttactatatattgagtctactcttgattccatgtcctggtaaaacatgcaaatagttaatctaaactataaatttcagttattactcctagcccctaggcacaccacactttctcctggatgttgtcctctctgtgcttattgctatgcactggttgtgctggatgccttgttagctttgcatcagatccgcctcatttcggtagtttgtgctgcttggttcattgtgcatagcattatgcccctcctggaccagcaaatcatccttgggctgcaggttgacaaccacagttgaactcctagtaaccccatgataattagagatctattttcactataaccattacaagtactgctgcatgatgtcatggttggctgtttgcagaaacaaagcatgatagcatcgcttcgtttttcagttattctgtatgaacaccaccagaaatatttggctgactagcctttgtctttcaggaaactttggtgaagtggttaacgtggagctatccatggatcgaatggtaagttaatgggttgcatttcattcacattatcagaggaacctcctgttggcatcaatactcatcgtgttcttatttaggtcaaccttcctcgtgggtatggatatattgagttcaagaagagaactgatgctgagaaagctcttctttacatggacggcgtatgttttctgccctgtgtttttgtttggtttgtttgataaacaagtgatcactgacttcaaagctgaaacatgtgcagggtcaaattgatgggaatgttgtgaagttgagattcacacttgcaccacggcaaagggcttcttcaccaatgaaggcgcctccccctcccccaaaaagagatgttcctcataatgagaaaggcgctcctagtgctgaaaaggatgtgcagcagcgcagggaacgtaagcttctaaagcacagtgtgattttgtcagatggatggtattagtagcttggtattctggttctttcgtaggcacttctatcttctgattgttgcttttgctcaatctagatttaagtttgcgggtccatgttattagtttcgatgatttaataacataccaccttgtcaacagcatccccacgaaggaagccagcttcacctccacgcaaaagaactcctccaaaccgaaggattgaatctcccaggcggcaacctgatccatctcctaggcgtcgtcctgattctccacctattcgtcgtcgagcagatgcttcgcctgtcaggcgtggtgacacacctcctcgtcggagaccaggatctccagtgagaaggcgttctccctctccaccacctagaaggcgtagatcaccaatgcggtgagcaatgtctcgatttctttcatatatatcttgggtattgtgactggaattcctgacactattctcacaacaacagtccttcacctaggaggcttcgtggaagcccatcaccacgcagacgctcccctgggcccattagacggcggtgagtcactttaatcttggctattgtgaatatgctttatgtaatcggcctgtctcatccagtaatataatacactatataaattaaaacttacatgtgcatgttccttcacttgtttcacccatattatgtgttggatctgttatttctgttttgtctgaaaagtgtgtgcccttctcatttccaactgtaaccattgttatatttttttcttttctccaggtcaccaccaccacccccaaggcggccaagaagccctcctggaagaaggctaccacctccacgtcgtcatagccgttctcccccgcctcgtcgtccccctcattcacgttccagatcaatttctcctcgaacgtaataaaattcactcgcatacatgtgtgcatactgcctctaaaatcttcaatagacgtctctttgatactgtattctaattctctccggcagcaggcgaggacctccattgaggcgtggaaggtctgattcatcgtattctcgatcacccagtcctccaagaaaggtaaatgctgaacctgctgtgttattcgtagacttgtatagagaatgtctgctccctctgtctcaaactataaggcgtataagttttttacagtcttcagcgtagagctttgaccattaattttgtttatagtatattataaactactacaaaattaaaatcacataaaagtactatcaaatacgaatctaatgatatcacatgcgtgacgcgaagcatatattttggtagcttaactattattcaaaagttacaaagattgactttcattcaaataatgataaccttatttgggacggagggagtatcctctgatgtttgcttctgctcttggttgtgcaattatttaatatattctgatcatagaatgtggttatatgctaatatgttttttcctttgaatagggaccaagaagggtatcaaggagccgcacccccccaaggtaacatgtcacctaatgttttgcatttattctcatgcaatttgcgttgtctagatattctagtgtaaaatacgcaaatgtttttcaggcatcgtagaggaagaagcatctctagcgacagccggagcagcagctcaccttccccgaggcgcaggtagaactcctgacattgcgttcctggcaggtaaaacttcttttgtttcttgactatcactatcgtttgcctgtgcttgtgtctttctgagagctcaagcggttggtttgaggggatacagagaactctgcttaaaagctttccagttaatctagattaccagtggagtctagtctgtgatctgtagttgtctactcagactcttgttggcattggttatgtagctcttcagtattatctgttctaacttcgtgactcttgcattccgaacctgaatattctgtggtgacacttgttcttaatactgttatcgttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0959000, RefSeq:Os01g0959000