Difference between revisions of "Os01g0968000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0968000| Description = Pentatricopeptide repeat containing protein| Version = NM_001052049.1 GI:115442468 GeneID:4324012| Length = 3037 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0968000|
 
GeneName = Os01g0968000|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0968000

Description

Pentatricopeptide repeat containing protein

Version

NM_001052049.1 GI:115442468 GeneID:4324012

Length

3037 bp

Definition

Oryza sativa Japonica Group Os01g0968000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44490772..44493808

Sequence Coding Region

44490772..44491005,44491075..44491143,44491369..44491489,44491684..44491859,44491961..44492062
,44492864..44493808

Expression

GEO Profiles:Os01g0968000

Genome Context

<gbrowseImage1> name=NC_008394:44490772..44493808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44490772..44493808 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgccgccggcgcctcctccccggcgcgccgccgcccgcgccgtggctccaagggccccaactccgacctctcccgcaccctcaccgactgcacccgccgtggcgacgccgccgccgccatggccgccttcgactccgccctctccggccccgacgccccgcgcctcctcgcccaccagtacaaccagctcttccacctcctcgccaccgccgacgccgactcgctccccaacgccgccgccgccgcccgccgcgtcttctcccacatgctcggctccggggcctccccctccgaggccaccatcacctcgctcgcccgcgtcaccgcctccgatgcctccaaccccgcggccgctgacgaggccttcgacctcgtggccaccatgagggacaagtacggcgtcgccccgcgcctccgctcgtacagccccgtgctcgccgcgttccgccgcgcgggggaggccgggaaggcctacgccgtcgatgcccacatggaggcctctgctgttgcccccgaggagcccgagatcgccgcgctccttgatgtcagcgccaaggcaggggacgcagacaaggtgtatgagtatatgcacaagctgagccgcaccgtggattgtgtcggcgaggagactgcggaggtgctggagggttggtttcggagcggtaaggcggcaatggcgggcaaggccgagtgggatgcttgtaaggtgaaggacgccattgtggccaatggtggcgggtgccatcggcttggatggcttgggaccggcccttggactgtgcagcgagtaagagttggaggagatggccagtgtgaggggtgtggttgccgtctagcatgtgttgacattgacgtcgaggagacgcagaggtttgccgattctgttgccagtctggcccttcagagggagaccaaaataaatttcagccagtttcaggagtggttggaagaacatggagcatatgaagctatagttgatggtgcaaatattgcactttatcaacaaaattttgcagagggtggctttagtttgactcagctggacgctgttgtaacagagctacgggatagatataatggtaaatggccacttgtcgtattacataataaacgcattgccaagcttatggaaaatgcatctaatagacacctgattgaaacctggagagcgaacggggcattgtacacttcaccaattgggtcaaatgatgactggtattggctgtatgcggcgattaggttgaattgtttgcttgtgactaatgatgaaatgagagatcacatatttgagctcttggggtcatcttttttccccaagtggaagcaacggcatcaggtcaagtacacctttagtaaaggaaaggcggtgcttatgatgccacctccatattcttcggagattcaggaatcggagatgggatcttggcatgtgcctatggaggagaaatctggtgatgacagagctaggatttggctttgtattgataggacagggcactgcaaacatccccatgaagctcctgcagcaaacggggttgtccaggatgtatctcccaccgaggcatctcatggatgtgagcagaggcgagcagaacataatggtggctccttaaccggtaaaagaaaggatagaaattga</cdnaseq>

Protein Sequence

<aaseq>MATAAGASSPARRRPRRGSKGPNSDLSRTLTDCTRRGDAAAAMA AFDSALSGPDAPRLLAHQYNQLFHLLATADADSLPNAAAAARRVFSHMLGSGASPSEA TITSLARVTASDASNPAAADEAFDLVATMRDKYGVAPRLRSYSPVLAAFRRAGEAGKA YAVDAHMEASAVAPEEPEIAALLDVSAKAGDADKVYEYMHKLSRTVDCVGEETAEVLE GWFRSGKAAMAGKAEWDACKVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGGDGQCEG CGCRLACVDIDVEETQRFADSVASLALQRETKINFSQFQEWLEEHGAYEAIVDGANIA LYQQNFAEGGFSLTQLDAVVTELRDRYNGKWPLVVLHNKRIAKLMENASNRHLIETWR ANGALYTSPIGSNDDWYWLYAAIRLNCLLVTNDEMRDHIFELLGSSFFPKWKQRHQVK YTFSKGKAVLMMPPPYSSEIQESEMGSWHVPMEEKSGDDRARIWLCIDRTGHCKHPHE APAANGVVQDVSPTEASHGCEQRRAEHNGGSLTGKRKDRN</aaseq>

Gene Sequence

<dnaseqindica>2804..3037#2666..2734#2320..2440#1950..2125#1747..1848#1..945#atggccaccgccgccggcgcctcctccccggcgcgccgccgcccgcgccgtggctccaagggccccaactccgacctctcccgcaccctcaccgactgcacccgccgtggcgacgccgccgccgccatggccgccttcgactccgccctctccggccccgacgccccgcgcctcctcgcccaccagtacaaccagctcttccacctcctcgccaccgccgacgccgactcgctccccaacgccgccgccgccgcccgccgcgtcttctcccacatgctcggctccggggcctccccctccgaggccaccatcacctcgctcgcccgcgtcaccgcctccgatgcctccaaccccgcggccgctgacgaggccttcgacctcgtggccaccatgagggacaagtacggcgtcgccccgcgcctccgctcgtacagccccgtgctcgccgcgttccgccgcgcgggggaggccgggaaggcctacgccgtcgatgcccacatggaggcctctgctgttgcccccgaggagcccgagatcgccgcgctccttgatgtcagcgccaaggcaggggacgcagacaaggtgtatgagtatatgcacaagctgagccgcaccgtggattgtgtcggcgaggagactgcggaggtgctggagggttggtttcggagcggtaaggcggcaatggcgggcaaggccgagtgggatgcttgtaaggtgaaggacgccattgtggccaatggtggcgggtgccatcggcttggatggcttgggaccggcccttggactgtgcagcgagtaagagttggaggagatggccagtgtgaggggtgtggttgccgtctagcatgtgttgacattgacgtcgaggagacgcagaggtttgccgattctgttgccagtctggcccttcagagggagaccaaaataaatttcagccagtttcaggtgcatatcctctgcccttctgtagtgttaacctgtatccatatctaacttggtatatgtaaccagttgattttactgactgcaattgatttactattaagtgtgataggaagatcactcgttttgcttggtctattcaatctaacatggccttgtgggctcagtgatcataacaacatagaaaaattgtagtcagagatgtaagcccatcggtctgtctccctgctttgttcaaaaaaccatttgatgcttcattgtggcctaacctaatagtgctcagctgatttatctatattgggtttcaccccttttagagatttaaatgctgctgtgtatttgagcaatgtctgctcagtagttccttgcccaggtaacttgttctatgtttagataaatcattatttggaacttcccttatgagttaagcattgaatttaccttcctaagaacgtaagatacctcatgcatgtgtttctcgatgcaagtcagaatatgattcagatacttattttttcttcgcgtgcctctagcgcctaggcagttcgcatacaagaaatccaagaaattagctggcatattgcatacaaattatactatgtaaccctaaaatagcaataaagcaccacccaagttagttcagccgcctaatgcagcatctaatgcctaattgtggctgctacccagtgcctaggcggcgcctagagccgacttttagaacactgcctctaggtgataatccatttataaatttggaacacatgttttttcttccttacaagtttgagtgctatgactttataggagtggttggaagaacatggagcatatgaagctatagttgatggtgcaaatattgcactttatcaacaaaattttgcagagggtggctttagtttgactcaggtctgaactccatctttcaatgtactttgacctatcaatgttatcagtgaagtaatgtggtactaatgcttttcctatctgtcatccttaatatagagcagctggacgctgttgtaacagagctacgggatagatataatggtaaatggccacttgtcgtattacataataaacgcattgccaagcttatggaaaatgcatctaatagacacctgattgaaacctggagagcgaacggggcattgtacacttcaccaattgggtcaaatgatgactggtaatgctcttcagtctctagtcttgggtgcacttgcatttttttttggggtaccttatattgtatttgtgcattcattgattaatatgtgcaattaggtaataggttggatatttcacccatcagtctccggtttgatgcacttgtgtttcatttcatcgatgttactaacagtacgatatgcactttttcaggtattggctgtatgcggcgattaggttgaattgtttgcttgtgactaatgatgaaatgagagatcacatatttgagctcttggggtcatcttttttccccaagtggaagcaacggcatcaggtgtgctctgcacttctttttatttaacatactggccattctttctgcataatttattaccacagaaccctgatttagaaaaggttgagtgccaggttaaacttaaaaccatgtaaacagatgctgggtcctttatcctgttgtaacatagtgatactgcttcacgtattggatattaccattcctgcttaattgttgattttgtttctcattccaattgtttaggtcaagtacacctttagtaaaggaaaggcggtgcttatgatgccacctccatattcttcggagattcaggtaagtaactgggctacaggcatctttagagcttgctatctgttgtttctgatgtaatcttcatcgtaggaatcggagatgggatcttggcatgtgcctatggaggagaaatctggtgatgacagagctaggatttggctttgtattgataggacagggcactgcaaacatccccatgaagctcctgcagcaaacggggttgtccaggatgtatctcccaccgaggcatctcatggatgtgagcagaggcgagcagaacataatggtggctccttaaccggtaaaagaaaggatagaaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0968000, RefSeq:Os01g0968000