Difference between revisions of "Os01g0976900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0976900| Description = Protein kinase-like domain containing protein| Version = NM_001052106.2 GI:297598424 GeneID:4327811| Length = 3561 b...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0976900|
 
GeneName = Os01g0976900|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0976900

Description

Protein kinase-like domain containing protein

Version

NM_001052106.2 GI:297598424 GeneID:4327811

Length

3561 bp

Definition

Oryza sativa Japonica Group Os01g0976900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44970293..44973853

Sequence Coding Region

44970293..44971640,44971746..44971814,44971961..44972032,44972165..44972233,44972467..44972910
,44973364..44973649,44973727..44973853

Expression

GEO Profiles:Os01g0976900

Genome Context

<gbrowseImage1> name=NC_008394:44970293..44973853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44970293..44973853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctctctgctgctgcctcctgcgcgcgcggcggctcctcttcttcttcttcttcttcttcttcttcttcttcgccgtcgccgtcgtcttgttctcctccgtctccgtcgcccagatacctgggttccagagcatcgactgcgggggctccggcaactacaccgacgaggtcgggctggagtggacgggcgacgaggcgtacgtgggcgggggcgcaggcacgacggcgagcatctcgtccatctcggggcaggggcggcggccttacaggacggtgcggtatttcccagcggacgggcgcaagtactgctacagggtgagcgtgaaggccaggacgaggtacctggtgcgtgcgagcttcctgtacggcaacttcgacggcagcagggtgttcccggagttcgacctactggacctcaacggcttcccgggcagcgggtgggcctgctcgtatctggcggagatcgaggacgacgcggccgccacggcgcgaaggttcaagctctacatcccggggctggccgaggtgagcaagccgacggtggacatcggagagaacgcgccggggaagtaccgggtgtaccagccgggctacgacaacatctcgctgccgttcgtgctccccttcgccttccgcaagacggacgactccgccaggggccccatcctcaatgccatggagatctacagctatatccccatactccctgcctcgcccgacgccgtcgccatggacgccctggcggcgcgctaccagcagcagcagcacagctgggcgcgggagggcggcgacccgtgtgttcccgcaccctggtcctggctcacttgcacctcatccagagtcatcgccatccggcttgacaacaacatgctgacaggcccaattccggacctcagtgcttgtacaaacctgacagtcatacacttagagaacaatcaactggagggcggtgtgccgtcatacctaagcggtctgcccaagctcagcgagctgtacctagagaacaacaggctgtctggagtcattcccagggctctgctaagtagaaccattgttttcaagtactcagggaacaagcatgtccgagtggggaagcaagaggaggaggagcggaatgtgataattgggatatgtgcgctgatgggaataggcttgttgcttgcagctgccctgtgctatgcctataatgttagtgttagcgggaggaaacaattacaaggtgctagtgcgggtgggaacagcaagagcaagagcatagtcgtgtccgcggagcagaagaagaaggcaacaccagtagcaggaggaggaggaggagaaatagacaacatgatggcggctatggcagcgcggggtccgttggagttcgaggtgagggagctggaggaggcgaccagcaagttcgcgaggaagatcgggtcgggcgggttcggggtggtgtactacgggaggctgggagacgggagggagatcgcggtgaaggtggcgagcagcaacgagtcgatccaagggaagaagcagctggccaacgaggtggcgcttctgtccaggatacaccaccgcaacctggtggcgttcctgggctactgctgggagcgcgacagcagcagctacatgctggtgtacgagtacatgcacaacggcagcctcaaggagcagctgcagatgatgagcatcagctggctccggcggctgcaggtggcggaggacgcggccaaggggatcgagtacctgcactgcggctgcacgccggccatcatccaccgggacatcaagaccagcaacatcctcctggacgcccacatgagggccaaggtgtccgacctgggactctccaagtccaacaaggccaccaactccaccaccaataccatcaccacccacgtgcgcggcaccctcggctacctggacccgcactactacgtctcccagcagctcacccacaagagcgacctctacagcttcggcatcatcctgctcgagctcatctccggccgcccgcccatcctgctcacgcccggcgccggtgccatggccagcctcgggccctgggccaagtcgcactacgagagcggcgacatcgaggccatcgtggacccgtcgctgcgcggccgctaccgcgacgtgcactcggtgtggaaggtggccgagacggcggtgcggtgcatcgacgccgatccccgggggcgcccgtccatgcccgaggtggtcaaggacatccaggaggccatcgcgctggagatgccgtcctcggagtcggagaggcccgccgccagcttcttctctccgggggcgggggcagccggtgcgcgctcctcggcgacggtgcggtcgcacgacctcgtcatggacaacctcatgtacgactccagcttctgcgattccctcaacctgccccgcacgcccagatag</cdnaseq>

Protein Sequence

<aaseq>MAPLCCCLLRARRLLFFFFFFFFFFFAVAVVLFSSVSVAQIPGF QSIDCGGSGNYTDEVGLEWTGDEAYVGGGAGTTASISSISGQGRRPYRTVRYFPADGR KYCYRVSVKARTRYLVRASFLYGNFDGSRVFPEFDLLDLNGFPGSGWACSYLAEIEDD AAATARRFKLYIPGLAEVSKPTVDIGENAPGKYRVYQPGYDNISLPFVLPFAFRKTDD SARGPILNAMEIYSYIPILPASPDAVAMDALAARYQQQQHSWAREGGDPCVPAPWSWL TCTSSRVIAIRLDNNMLTGPIPDLSACTNLTVIHLENNQLEGGVPSYLSGLPKLSELY LENNRLSGVIPRALLSRTIVFKYSGNKHVRVGKQEEEERNVIIGICALMGIGLLLAAA LCYAYNVSVSGRKQLQGASAGGNSKSKSIVVSAEQKKKATPVAGGGGGEIDNMMAAMA ARGPLEFEVRELEEATSKFARKIGSGGFGVVYYGRLGDGREIAVKVASSNESIQGKKQ LANEVALLSRIHHRNLVAFLGYCWERDSSSYMLVYEYMHNGSLKEQLQMMSISWLRRL QVAEDAAKGIEYLHCGCTPAIIHRDIKTSNILLDAHMRAKVSDLGLSKSNKATNSTTN TITTHVRGTLGYLDPHYYVSQQLTHKSDLYSFGIILLELISGRPPILLTPGAGAMASL GPWAKSHYESGDIEAIVDPSLRGRYRDVHSVWKVAETAVRCIDADPRGRPSMPEVVKD IQEAIALEMPSSESERPAASFFSPGAGAAGARSSATVRSHDLVMDNLMYDSSFCDSLN LPRTPR</aaseq>

Gene Sequence

<dnaseqindica>2214..3561#2040..2108#1822..1893#1621..1689#944..1387#205..490#1..127#atggctcctctctgctgctgcctcctgcgcgcgcggcggctcctcttcttcttcttcttcttcttcttcttcttcttcgccgtcgccgtcgtcttgttctcctccgtctccgtcgcccagatacctggtgagtctaataatctctatattttattttatggagttgtgggtcagtgagtgagatggtacgtaatgcgtgggcagggttccagagcatcgactgcgggggctccggcaactacaccgacgaggtcgggctggagtggacgggcgacgaggcgtacgtgggcgggggcgcaggcacgacggcgagcatctcgtccatctcggggcaggggcggcggccttacaggacggtgcggtatttcccagcggacgggcgcaagtactgctacagggtgagcgtgaaggccaggacgaggtacctggtgcgtgcgagcttcctgtacggcaacttcgacggcagcagggtgttcccggagttcgacctgtacgtgggcgcctcgcggtggtccaccatcgtcatctacgacgagtccaaggtggtgacgagggagatggtggcgctggctcagtccggaccctccctctccgtctgcctcgccaacgccaccaccggccaccccttcatctccaccctcgagctccgccctctcaacgcctccctctaccacaccgccttcgaggccgccttcttcctctccctcgccgcccgcatcaacttcggcgcccccaccgccgatcccgtccgctaccccgacgacccctacgaccgcgtctgggagtccgacatggcgcgcaggccaaacttcctcgtcgacgccgcgcccggcaccatccgcgtcgccaccgacaaccccgtcttcgtggcctccggcgagcgcccgccgcagaaggtgatgcagaccgcggtggtgggcacgctgggcgcgctcacctacagactggacctcaacggcttcccgggcagcgggtgggcctgctcgtatctggcggagatcgaggacgacgcggccgccacggcgcgaaggttcaagctctacatcccggggctggccgaggtgagcaagccgacggtggacatcggagagaacgcgccggggaagtaccgggtgtaccagccgggctacgacaacatctcgctgccgttcgtgctccccttcgccttccgcaagacggacgactccgccaggggccccatcctcaatgccatggagatctacagctatatccccatactccctgcctcgcccgacgccgtcgccatggacgccctggcggcgcgctaccagcagcagcagcacagctgggcgcgggagggcggcgacccgtgtgttcccgcaccctggtcctggctcacttgcacctcatccagagtcatcgccatgtacgtacgtcgtcactctttcaattattcccgggcgtttccttccttggagtagtaacgtagtacggaacgggtgcagaaatctttcaggaaacaacttgacaggcgccattccaccggagctagcggcgctcccatgcttacaggagatgtacgtaacacaagcgactgactcgctcttaattccattaattaagctgatcgatgagctctcttctctgacgaatttgcagccggcttgacaacaacatgctgacaggcccaattccggacctcagtgcttgtacaaacctgacagtcatgtgagtaactcaattcaccacttgcacgcacttgcaccaggcttatttctgttttcctttttctatagtatatactccttatgtccatattataaactaacaatattgtcgaattgaaattttcttttgcagacacttagagaacaatcaactggagggcggtgtgccgtcatacctaagcggtctgcccaagctcagcgagctgtgagtcttttatatactgtatgtactactatatatcctagtctaggaacatatataatagtaccatataagtgagagatttgttaagaaaatgcatgctgataattaaattataagagaatcggcatggtatgtataaaatgcaggtacctagagaacaacaggctgtctggagtcattcccagggctctgctaagtagaaccattgttttcaagtgagtgatatatatgatgtatgcctataataataatgaaataaaatgaatggtgaaattaattactccagtatatgcgcgcggcatatgtacgtatgtttgcaggtactcagggaacaagcatgtccgagtggggaagcaagaggaggaggagcggaatgtgataattgggatatgtgcgctgatgggaataggcttgttgcttgcagctgccctgtgctatgcctataatgttagtgttagcgggaggaaacaattacaaggtgctagtgcgggtgggaacagcaagagcaagagcatagtcgtgtccgcggagcagaagaagaaggcaacaccagtagcaggaggaggaggaggagaaatagacaacatgatggcggctatggcagcgcggggtccgttggagttcgaggtgagggagctggaggaggcgaccagcaagttcgcgaggaagatcgggtcgggcgggttcggggtggtgtactacgggaggctgggagacgggagggagatcgcggtgaaggtggcgagcagcaacgagtcgatccaagggaagaagcagctggccaacgaggtggcgcttctgtccaggatacaccaccgcaacctggtggcgttcctgggctactgctgggagcgcgacagcagcagctacatgctggtgtacgagtacatgcacaacggcagcctcaaggagcagctgcagatgatgagcatcagctggctccggcggctgcaggtggcggaggacgcggccaaggggatcgagtacctgcactgcggctgcacgccggccatcatccaccgggacatcaagaccagcaacatcctcctggacgcccacatgagggccaaggtgtccgacctgggactctccaagtccaacaaggccaccaactccaccaccaataccatcaccacccacgtgcgcggcaccctcggctacctggacccgcactactacgtctcccagcagctcacccacaagagcgacctctacagcttcggcatcatcctgctcgagctcatctccggccgcccgcccatcctgctcacgcccggcgccggtgccatggccagcctcgggccctgggccaagtcgcactacgagagcggcgacatcgaggccatcgtggacccgtcgctgcgcggccgctaccgcgacgtgcactcggtgtggaaggtggccgagacggcggtgcggtgcatcgacgccgatccccgggggcgcccgtccatgcccgaggtggtcaaggacatccaggaggccatcgcgctggagatgccgtcctcggagtcggagaggcccgccgccagcttcttctctccgggggcgggggcagccggtgcgcgctcctcggcgacggtgcggtcgcacgacctcgtcatggacaacctcatgtacgactccagcttctgcgattccctcaacctgccccgcacgcccagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0976900, RefSeq:Os01g0976900