Difference between revisions of "Os02g0102900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0102900| Description = Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (F...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0102900|
 
GeneName = Os02g0102900|

Revision as of 19:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0102900

Description

Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment)

Version

NM_001052136.1 GI:115443642 GeneID:4327993

Length

5067 bp

Definition

Oryza sativa Japonica Group Os02g0102900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:158662..163728

Sequence Coding Region

159595..159801,159892..160017,160201..160338,160431..160526,160958..161200
,161303..161537,161612..161781,161975..162052,162156..162227
,162345..162449,162555..162647,162737..162829,163109..163235
,163317..163330

Expression

GEO Profiles:Os02g0102900

Genome Context

<gbrowseImage1> name=NC_008395:158662..163728 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:158662..163728 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcagcattcgggagcacctcagcatgtggcatcaagatcactcctaccgcttttgccaccaagaaacatctttgcctggttccacccccagtcgtttcacttccccggaaaaataggcctcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgggttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctggtgctaatccagtacagattacccgtggtatagagaaaacggccaaagcacttgtgagtgaactccaaaaaatgtccaaggaggttgaagacagcgaacttgctgatgttgctgcggtaagtgctggaaataactacgaaattggcaacatgatagctgaagctatgaacaaggttggacgacagggggtggtcacacttgaagaaggaaagagtgctgaaaataatctctatgttgttgagggaatgcaatttgatcgcggctatatttctccctactttgtaactgacagtgaaaaaatgtcagtggagtatgagaattgcaagttgctccttgtggacaagaaaatcaacaatgccagagatcttataacaattctggaggatgctattaggggtgggtacccaatcctaatagttacggaggatattgagcaggaagctcttgcaactcttgtggtcaacaggcttaggggtgcattgaagattgctgctattaaagctcctggttttggagaacgcaagagtcaataccttgatgatattgctactcttactggaggtactgtcatcagggaagaagttggcttgtccctagacaaagctgatagagatgttctaggaacggccgccaaggttgtagttaccaaggattcaacaacaatagttggggatggtactacccaggacgaagtaaacaaaagggtgacacaaatcaagaaccagattgaggttgctgaacaggaatatgagaaagaaaaactgaatgagagaatagctaagctctctggtggtgttgctgtcatccaggtaggagcacagacagaaactgagcttaaggaaaagaaactgagggttgaagatgcactgaatgcaaccaaggcggctgttgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttgatgccattatagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaagtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgttactgagaaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaaatatgaggatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgcttggagcatgctgcgtcggtggcgaaaacattcatcacatcagatgctgttgtggtggacatcaaggagcctgagaaagcagctgctgctgggaacccaatgggtggatcaggttttggattttag</cdnaseq>

Protein Sequence

<aaseq>MASAFGSTSACGIKITPTAFATKKHLCLVPPPVVSLPRKNRPQR KCNFRVNAAKELYFNKDGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIV NDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVA AGANPVQITRGIEKTAKALVSELQKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMN KVGRQGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDK KINNARDLITILEDAIRGGYPILIVTEDIEQEALATLVVNRLRGALKIAAIKAPGFGE RKSQYLDDIATLTGGTVIREEVGLSLDKADRDVLGTAAKVVVTKDSTTIVGDGTTQDE VNKRVTQIKNQIEVAEQEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA LNATKAAVEEGIVVGGGCTLLRLASKVDAIIETLENDEQKVGAEIVRKSLSYPLKLIA KNAGVNGSVVTEKVLANDNFRYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAK TFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF</aaseq>

Gene Sequence

<dnaseqindica>934..1140#1231..1356#1540..1677#1770..1865#2297..2539#2642..2876#2951..3120#3314..3391#3495..3566#3684..3788#3894..3986#4076..4168#4448..4574#4656..4669#attgattgagcagccggcggcggcgatctttgcttaaaccctaatctcagacgctgcctttgagagaggagaggggggagatcttcttcttcgcttacggcgggtgcaggtatcccatccaatccatcttcccctcacctctctccctctctctcttatacaggttagattggacgacattccatcaagaatgttagttaaaacaatgtcaatgatggatggatcgaataagaggaatatagattagctgcgattgaccgcgatggatcaatcaaattcaatccatcgattttttcccctcgagtattttggtggtcatcttcattcgatctggcgttcaaggccaagttttgcacttttcatcttgtctcacagatttgatcgctcaacttctcttctaaaacatcctcctttacctacctacttcctcatctccctgattttccctgcttcctctttttgccgctattcccctcccctctcctctcctctccttgcagaacttgttttttttttttaaaaaaaatcatctcccttttattttcttgtagacaagcagtgtagagccctggtgctactctgttagagccaatcttacagatcatggatggatgcgaatgctattgaccagtctcggtcaaactcaaattaatcactacatatatatatgccacaacacttgaaacaaattacttcaacttttcaaccatctatttttccctatatatgcctgtactagtatgactgcttttccttgcaaagtaattgtaacctgttctagcaactagaaacttcttttctgtctgcttagtttgccaaaggtctctttcaagcatttttttttttaaatcagagtttcttcttcctctgttttctcccttcttgtgttcactcatgctgatgtagtctggcaacttctctgcaacagacaatatggcctcagcattcgggagcacctcagcatgtggcatcaagatcactcctaccgcttttgccaccaagaaacatctttgcctggttccacccccagtcgtttcacttccccggaaaaataggcctcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgggttggctatcaagaagctgcaagtgagttgtacattctaataatttctactagcatgatgctatcatctataacatcaacttctgagttgtgacttctattttctatgacagaatggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaaaggaggtatgccacgtatagtaaactgttcgtgttcttatgatgcaatcctatcattgcttaaattcagagttttctgaaaaatgactgaacatttggcataaactgtttgttttcttatgatgcaatcctatcatagcttaaattcagagttttctgaaaaatgagtgaacatttggcatgcaccaggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaagggatgatcacagagggtgttaaggtacaccaatataaaagccttgtatcttaattttacagcataaatattttacttggttctgggaacaatcgtggatctgtttactttcccaggttgtggctgctggtgctaatccagtacagattacccgtggtatagagaaaacggccaaagcacttgtgagtgaactccaaaaaatgtccaaggaggtaagttatggacttctgtttaagatcttattcttttctgcaacaaatcactatactccgctagtcatgtaatgcagccaaaatagggtgtgccatacatgagatacttctatagtcctatatacaatatacaactctatgaaaaagttaacgtggttctcacttgcccatttgtaaatttgtaaatcaactggatttgtatatacgtagctaagtctaatgattttgatatgagtggtgtatagtgtgccatgtttcacgtttctttttcagtaatactaaacatgagtgctgggaatcttctgtgctgatatttaagtaacacccatttgaattcaggagcattggctgccagtttgaatcgtactcatccgctacagcactatttttgcttgaaatttgaatctatcatattgcatgcaactttgcaggttgaagacagcgaacttgctgatgttgctgcggtaagtgctggaaataactacgaaattggcaacatgatagctgaagctatgaacaaggttggacgacagggggtggtcacacttgaagaaggaaagagtgctgaaaataatctctatgttgttgagggaatgcaatttgatcgcggctatatttctccctactttgtaactgacagtgaaaaaatgtcagtggagtatgagaattgcaaggtttgatgcattctagaattcggtgtacttaaactgtgcattaaccagatactcatttgtgggctctatgcatttgatgctaatgttgattctatcacccagttgctccttgtggacaagaaaatcaacaatgccagagatcttataacaattctggaggatgctattaggggtgggtacccaatcctaatagttacggaggatattgagcaggaagctcttgcaactcttgtggtcaacaggcttaggggtgcattgaagattgctgctattaaagctcctggttttggagaacgcaagagtcaataccttgatgatattgctactcttactggaggtgatattcagcttttgacataagttgtctacactctaagccacacgtgcgcttatatatcgttcttctttcaggtactgtcatcagggaagaagttggcttgtccctagacaaagctgatagagatgttctaggaacggccgccaaggttgtagttaccaaggattcaacaacaatagttggggatggtactacccaggacgaagtaaacaaaagggtgacacaaatcaagaaccagattgaggtctgtattatttaaaattaaaaattctatgtgttcctgtacttctcgtcaaaccactcctgtattcattttctcctgaccctgctcttttttgggggtttctttgcttacatgaatttacagggcagatcttttggattcacatgtctcagtatttttttgtggatttttatacaagttattttttcttcaggttgctgaacaggaatatgagaaagaaaaactgaatgagagaatagctaagctctctggtggtgttgctgtcatccaggtgatctcgatgttctgcaattgaaccaatgcacttgttaatgtactactaggctgcatttgcagaagataattgttgtgaaatgacgctacttgttatgtaggtaggagcacagacagaaactgagcttaaggaaaagaaactgagggttgaagatgcactgaatgcaaccaaggtgaatacttctctttgttaatataatttaattttgggattgcattcagagagccttctgatgcacatagagtatatgggtttgttgtttgttacttaatagtttgctctgtggcaggcggctgttgaggaaggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttgatgccattatagaaacacttgagaatgatgaacagaaggtaggaaaacaaatgaaataatctttggttattgtttcatttcatcctaggttcaaggcatttgttttctattgtcaataattaaaatttctttttggcttcaaggttggggctgaaatcgtaaggaagtccttgagttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgttactgagaaggtttgtactctgacatttgttcttaagtacgatgaatatgcaattctgcagctcgtgtgtaacgaatttttgaacatgtatgatttcaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaaatatgaggatttgatggctgctggtattattgatcccaccaaggtaattttctgccgaatcaatgcgctttcttattcgtagtcacatcagaagtaattctttcattattagaatatatattgaaatgcacgtgtgcctttgtgttgtgctgtaaaattaatataaccgatttaccatgttgaaccgatagaagtgatcagctgcatgaagatgaacctctgggatatggattttctttccttgcaatcaaacaaggatgttttccaccctattttttatattagtattttgagtccataaagctaacgttgtgtgaaacaggtggtgagatgttgcttggagcatgctgcgtcggtggcgaaaacattcatcacatcagatgctgttgtggtggacatcaaggagcctgagaaagcagctgctgctgggaacccaatgggtggatcaggtacacggacctgctcatcatgatcaaacagtagtatatattgtatgcttgaacagagtttgctaattgttttttgttcaggttttggattttagtttagaagaagaggagtaccctttttggcagttggcaaccatttttacactggaggcaggcagaatttcacagttgcatctgagacgttttttcttttcctgtgtgtaattgttgcgtacgtcaatgtggcagatgagaggagtagtaggttatgaatggccagcattatgacagtttattgttgctcgaccttacagaagagctgaaacagtgcaacataatgtttttaaggttgagaattatgcaagctgaagtagttggtaataaccgggagaggattgtgttgtcgttggagtagatgatgattttactagctagttagatcgagttacaaacatataattaattaattaagggggcattggcagattacaataataaataaattatttacatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0102900, RefSeq:Os02g0102900