Difference between revisions of "Os02g0109400"
(Created page with "{{JaponicaGene|
GeneName = Os02g0109400|
Description = Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein|
Version = NM_001052179.1 GI:1154437...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os02g0109400| | GeneName = Os02g0109400| | ||
Revision as of 19:07, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os02g0109400 |
|---|---|
| Description |
Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein |
| Version |
NM_001052179.1 GI:115443728 GeneID:4328036 |
| Length |
7772 bp |
| Definition |
Oryza sativa Japonica Group Os02g0109400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:509377..517148 |
| Sequence Coding Region |
509377..509425,510200..510270,510420..510539,510684..510769,510843..510915 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:509377..517148 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:509377..517148 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgcccaagaggaagcgcggtggcgggaggccgcgcaaggccccggaggacgccgccgccaaggaaaacggtgagaagacaaacaaggaggaggaaacgcaggcttctcctgaggagaatggcgcagggcagactcaggcctcgagaaccgcaagaaagcgcaggaagggtcctgttgctgatccctcttcgactgaacttccacccaggaagctcagggacaggcggaacgttccagcggtagactacaaggagaataagcacacaaaaaagatggatggaacttcaaccatgtgccatcagtgccaaaggaaggacagtggaagagttgtgaggtgccggaatggtgctgaaaaaaacaggaggcacagatattgtgtcaagtgcatcaaacgctggtacccgcatctaacagaggacgattttgagaactgctgtccagtttgtcacaataactgcaattgtaagacttgtctgcggacaaatgtaataaataagggtgacaaggagtttgccgatggtaagaacaaaattaaatactctctgcgtattgcacgctttttgctcccttggttgaaacaacttcaccaagagcagatgctagagaaaagtgttgaggccacaattaaagggatcgatgtaactgacttggaggttcctcaagctcagtttaataatgatgagcggatttactgtgataactgcagaacatccattgttgacttccacagaagttgtaaaagtggtcactatgatctctgcctcagctgctgccaggagttgcgtcaaggtcttactactggtactgttgtcacttgtgacacagctgttgatgtacctgaaatagaaggcaaggaaggtttgcaagagggaagtagtcatagcagtgctgtaggtcaaggggcttctgatcaacagaatgacaggttgataggtagtgcagctccttcagaggattgcactcctagtttgatatggagggcaaaaagcaacggaagcataccatgcccacctaatgcaggtggttgcggggattgtcttctcgaacttaggtgtttgtttaaggagaactttatttctgatttactggataaagtcaattcagtggtcaataaggaaacagagcaggagttgggaggctctagatgttcctgcttcactgaatccggtgaagtgaacaatgaaacatcacggaaatcagcttgcagagaggactccaatgataactacatatattgtccaactgctagagaagttcaaagtggagctttagatcattttcagcagcattggttgaatggtcagccagtcattgttcgtgacgtgcttgagctaacttctggactgagctgggagccaatggttatgtggcgggccttacgggaaaagagagacaagaaagagcatgaacggctctcagttatagctcttgattgtctgacatggtttgagtttatgtaccaccaggatgtgttggtggtgccagtttcatatctggggttcaacagcaccattgaaactactttatatttcaaactggttgatataaatattcacatgttttttgaggggtattcccgtggagctgttggttcggaggatttgcctgtgctacttaagcttaaagattggccacaacatagttcctttgaggagcgcctgccgcggcatggtgctgagttcatgtctgcactaccatttcgtgagtatacagatccaaaatctggtccccttaatctggcagtgaagcttccaaaacatgttaaaaagccagatcttggtccaaagacatacattgcttatggtgtcgcccaagagttgggaataggtgattctgttacgaagatccattgcgacatgtctgatgcggttaatattctcatgcatactgatgaggtagaactcaaagctgaaaggattacagcaatagagaaaaagaaagagagcttacgtaaagatggcaagaatcttcatgttctgcgaccagaccatgacgatgatacatcaatagctctcagtgaatcaactgaagtgccaagatctcgaggacttgaaaatggctcaagcattaagcagccagcaccaaatgttgctgtaatggaccagggaggtgttcatacagatatggtagctgatgaagctgagggaaacttgagtctgtctaatgggcaatcacccaatcaaagtgatgcacataatatggatattactttctccaagggggaaacagaccattctatctgcacaattaatgggggagaggagatgggcaatggctttgggagggaagataaatgtaaatcttctcatggtgtaggatcatctgaatcttctgattgtcaaagacgcagtaggcgacgtgatgcttgctcttccagtgcaacaggggaaataaacgaaaccagcatggagactaacaaatttaccatatctattgagcccaaagatgatcacccatttgttgagggaaatcagacagagggtggtgcattgtgggatatcttccgacgtgaagatgtcagcaaattgcatgattatctgatgaagcatgcagaagagtttagacattataattatgaaacagtcaaacaggtttctcatcctattcacgatcaatgcttttatctaacaaatgagcacaagagaaagctcaaggaagaacatggaattgagccttggacatttgaacagaaacttggtgaggctgtgtttatcccagcaggatgtccccaccaagtcagaaatttgaagtcatgtataaaggttgcacttgactttgtttctccggaaaatgtgcaagagtgcatcaggctgacagaagaatttcgcttgcttccgaagggtcatagggtgaatgaagataaactagaggttaagaagatagctctatatgcacttgatcaagccattgacgatatcacaggcaaaagttgcaatgaaaggacaaaggatgaaggggaagaggaggcgtctgccccaagtgttagttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPPKRKRGGGRPRKAPEDAAAKENGEKTNKEEETQASPEENGAG QTQASRTARKRRKGPVADPSSTELPPRKLRDRRNVPAVDYKENKHTKKMDGTSTMCHQ CQRKDSGRVVRCRNGAEKNRRHRYCVKCIKRWYPHLTEDDFENCCPVCHNNCNCKTCL RTNVINKGDKEFADGKNKIKYSLRIARFLLPWLKQLHQEQMLEKSVEATIKGIDVTDL EVPQAQFNNDERIYCDNCRTSIVDFHRSCKSGHYDLCLSCCQELRQGLTTGTVVTCDT AVDVPEIEGKEGLQEGSSHSSAVGQGASDQQNDRLIGSAAPSEDCTPSLIWRAKSNGS IPCPPNAGGCGDCLLELRCLFKENFISDLLDKVNSVVNKETEQELGGSRCSCFTESGE VNNETSRKSACREDSNDNYIYCPTAREVQSGALDHFQQHWLNGQPVIVRDVLELTSGL SWEPMVMWRALREKRDKKEHERLSVIALDCLTWFEFMYHQDVLVVPVSYLGFNSTIET TLYFKLVDINIHMFFEGYSRGAVGSEDLPVLLKLKDWPQHSSFEERLPRHGAEFMSAL PFREYTDPKSGPLNLAVKLPKHVKKPDLGPKTYIAYGVAQELGIGDSVTKIHCDMSDA VNILMHTDEVELKAERITAIEKKKESLRKDGKNLHVLRPDHDDDTSIALSESTEVPRS RGLENGSSIKQPAPNVAVMDQGGVHTDMVADEAEGNLSLSNGQSPNQSDAHNMDITFS KGETDHSICTINGGEEMGNGFGREDKCKSSHGVGSSESSDCQRRSRRRDACSSSATGE INETSMETNKFTISIEPKDDHPFVEGNQTEGGALWDIFRREDVSKLHDYLMKHAEEFR HYNYETVKQVSHPIHDQCFYLTNEHKRKLKEEHGIEPWTFEQKLGEAVFIPAGCPHQV RNLKSCIKVALDFVSPENVQECIRLTEEFRLLPKGHRVNEDKLEVKKIALYALDQAID DITGKSCNERTKDEGEEEASAPSVS</aaseq> |
| Gene Sequence |
<dnaseqindica>7724..7772#6879..6949#6610..6729#6380..6465#6234..6306#5431..6153#3068..3397#2939..3025#1899..2655#1750..1813#1540..1672#1348..1447#1061..1197#808..954#671..721#1..66#atgccgcccaagaggaagcgcggtggcgggaggccgcgcaaggccccggaggacgccgccgccaaggtaaccgaagcgaagctgcttcgattaggtctcgtttttttttattttctctctcgttccttcgggcaacgcctcggaaaacccggggagttgctatgatgtgctgcgtcttcttcgcgccgttgtcgtcgaggggatgttgggacgtttaaaccctagcggatggattcgtgctagtatctccgagcaacactggctgcttcatgtttgctttcggtgtgttagttttgccgctttgagttgttcccctttctttctgtatttgttattctggtcggggatgtgaagtgggcaatatccttggattccttttcgcgcttgcaatggataatggattttgctcccttttcttcaatcatagtgtactgttatttggataatcgaccatttccctgattttgcttgtctaagctacagagttgtcaaatttcattggatatctaccaatctattggatttctaagcctgggttgctcacggaatgtgcagcactgaagagttcctctgcaattgcgctgaattttccctccacttctttttaagaagagcttaatatgtagttttgcatacgaaatgcttgaccagttattgggtgcggttgcaggaaaacggtgagaagacaaacaaggaggaggaaacgcaggcttctcctgaggttagtgttttcttttcctgccggggactggaaatgcaaacatttaccatgttccgaatgtgtgatggatctctttttggttccaggagaatggcgcagggcagactcaggcctcgagaaccgcaagaaagcgcaggaagggtcctgttgctgatccctcttcgactgaacttccacccaggaagctcagggacaggcggaacgttccagcggtagactacaaggagaataaggtggaaattgcaatcttttatacagcatattctctatggtgtatttgcagttgtatgtcagtaattcattgctaagtccttatatcatgatttccttgatttgcagcacacaaaaaagatggatggaacttcaaccatgtgccatcagtgccaaaggaaggacagtggaagagttgtgaggtgccggaatggtgctgaaaaaaacaggaggcacagatattgtgtcaagtgcatcaaacgctggtttgtgcccttctaaaagcactcaatgttgatcaccttagttgtgtcaccctttcagttcttattatgttagttcatgcacaaatttacatttatatcttagctactaatatggatctgttgcttgtttctgtggcatgatctaagcaggtacccgcatctaacagaggacgattttgagaactgctgtccagtttgtcacaataactgcaattgtaagacttgtctgcggacaaatgtaataaataaggtacacctcttttttttgttgtcccgtttctattttattacctggcctcattgcttcattttgtttgatattttctgttatgcgtttgtcagggtgacaaggagtttgccgatggtaagaacaaaattaaatactctctgcgtattgcacgctttttgctcccttggttgaaacaacttcaccaagagcagatgctagagaaaagtgttgaggccacaattaaaggtattatcatagcttaacacggttcccttttagcactaagtttcttttgttggttcctaatcctaattctgcaacagggatcgatgtaactgacttggaggttcctcaagctcagtttaataatgatgagcggatttactggttggtattgctttatttgtaaagcatgtggactatatgttctttcaagtgtgaactatctaattttttggtttatttgaaacagtgataactgcagaacatccattgttgacttccacagaagttgtaaaagtggtcactatgatctctgcctcagctgctgccaggagttgcgtcaaggtcttactactggtactgttgtcacttgtgacacagctgttgatgtacctgaaatagaaggcaaggaaggtttgcaagagggaagtagtcatagcagtgctgtaggtcaaggggcttctgatcaacagaatgacaggttgataggtagtgcagctccttcagaggattgcactcctagtttgatatggagggcaaaaagcaacggaagcataccatgcccacctaatgcaggtggttgcggggattgtcttctcgaacttaggtgtttgtttaaggagaactttatttctgatttactggataaagtcaattcagtggtcaataaggaaacagagcaggagttgggaggctctagatgttcctgcttcactgaatccggtgaagtgaacaatgaaacatcacggaaatcagcttgcagagaggactccaatgataactacatatattgtccaactgctagagaagttcaaagtggagctttagatcattttcagcagcattggttgaatggtcagccagtcattgttcgtgacgtgcttgagctaacttctggactgagctgggagccaatggttatgtggcgggccttacgggaaaagagagacaagaaagagcatgaacggctctcagttatagctcttgattgtctgacatggtttgaggtaagtaacattatgttaataaaattgcaataagctgcctcttgtagagctgatgctagggattgtcagtcacataatctacacgagtacaattataaacgtgtggagttgaaacattgatcatcgtgatttcttgaggtgtgtagatgtgccagtggaatccctgataccatgaaaatgtacacacaacaaaagaaaaagaactgtatatctacctaatgtcagctcagcttatgtgcctggtagtggtagaacttatgaacttcacatatcaatatattagtttatgtaccaccaggatgtgttggtggtgccagtttcatatctggggttcaacagcaccattgaaactactttatatttcaaactggtaacttcctaataccattgctttcatttaaccataatgcaggttgatataaatattcacatgttttttgaggggtattcccgtggagctgttggttcggaggatttgcctgtgctacttaagcttaaagattggccacaacatagttcctttgaggagcgcctgccgcggcatggtgctgagttcatgtctgcactaccatttcgtgagtatacagatccaaaatctggtccccttaatctggcagtgaagcttccaaaacatgttaaaaagccagatcttggtccaaagacatacattgcttatggtgtcgcccaagagttgggaataggtgattctgttacgaagatccattgcgacatgtctgatgcggtaaataagtgaatttcttgtgatttctggcatttgtatatgtagatttatggattaaaatcttgtttccttttaattcatattgattgtacatattgctatccttggatgctattatatgttatggatagaaagtatcggagacgtaaacatggaaaggaaggggctgctgggaactcaaaattagcagggcctcctgcagtagtctgggaggatatacattcctagtctttatatatcaaatatagtagctatttcctagtattcaggtcaagtttgtatgttgtactaccatatgtccatatctcgcttcttcgtagtttaagagttatccctgttatatgaagggaccaattttgtactagcagcaatcagtcaataaagctgaaggtcttcacccaactctaaatccttgccaaccgagcatctagctgagcaggacaaccctgcttgacctgagagtgctggttcatacctgcctgtgtttctattcctgaccttcttcctcctctttactacattatttcgtatcatagcaatctcctcctccagcagccctagccctctgaccaacccatccctgccatccaccatataaaactccaaagccctggaagagctcttcaaacagctggggtacagacctgggcaagaagatttatatcctcatttctaggcaggatgccatgaacacaagtgatgcaagggctgtagcatgataccctggccctcatggcctcattccaaccagcactagccgcagcagcaatgtcttggcatcagtgctagggcaggatgaagatgcgtgtggtgcgctattctaccacaaattgaccttctcagcatttgatggcaaagaagacccactcccatggtttaatcgttgcgagcaatttttcaaggaccgtgatctcttgaagagggaaggaatggcttgtgtcagaccacatgatgggcgaggcacagaagtgctatatgcagttttaaatgatatgaaggcgttttcttgtggaaaaaaaactgcgactttgtcaacatgcactatggctctccaatgcacagcaatgccttgaaccaattatctctattacaccatactaggatagtggcagagtaccaaaaaaattctttgctctcttgtaccaggtttcaccatctcttctgaaagaacagcaagtcaacttgttcactgctggcctcggccaatcattgcctactgatgtggagttgtaaaatcttacagaccttcagcaccccatgagcctagctcgtgccgttgaacagtggctggaagacaactacagtgacagtacgagcatcgaatatatagaagccatttcctagtttaactttagattgtagtcatgtcaagtctgcaagttattctactatatttagctccttcctagtttaagagtgagccctgttataaagggacaatttttgtactagtaccgaaccaagcaggacaaagcttgctcaacctcagggcactgggttctacctgcatgtttttggcttcaaatattcttctgttggcatgttggaagttgcttatttagatttttgatttttcagttctctttatagttgattaccaatgctaacatctagtctagttattaaacacagcataaatttatagaatcatctataaaaagaattatgtgatatttgcttgtgttgtcttgttacttgctgctgaaagctgcactccttagtttaattcttgctacggtggctgacaatgctggatagttggttgaccatgtcatgaattatatgggaaaaaaccaatggaacgttaattttaattatgaaaatgtatctgatgcatacagtatccagctgtatcattgtgtttttttaataaaaagctgtatcatcgtgtgattttcctttttttttaataaaaagctgtatcatcgtgttattttcctgatttcaggcctttccatttgttatacacctgtttactttgttcagttttgactaataaagtaataatcacatgtttcctattgcgtaaacaggttaatattctcatgcatactgatgaggtagaactcaaagctgaaaggattacagcaatagagaaaaagaaagagagcttacgtaaagatggcaagaatcttcatgttctgcgaccagaccatgacgatgatacatcaatagctctcagtgaatcaactgaagtgccaagatctcgaggacttgaaaatggctcaagcattaagcagccagcaccaaatgttgctgtaatggaccagggaggtgttcatacagatatggtagctgatgaagctgagggaaacttgagtctgtctaatgggcaatcacccaatcaaagtgatgcacataatatggatattactttctccaagggggaaacagaccattctatctgcacaattaatgggggagaggagatgggcaatggctttgggagggaagataaatgtaaatcttctcatggtgtaggatcatctgaatcttctgattgtcaaagacgcagtaggcgacgtgatgcttgctcttccagtgcaacaggggaaataaacgaaaccagcatggagactaacaaatttaccatatctattgagcccaaagatgatcacccatttgttgagggaaatcagacagagggtggtgcattgtgggatatcttccgacgtgaagatgtcagcaaattgcatgattatctgatgaagcatgcagaagagtttagacattataattatgaaacagtcaaacaggtaattagttattctaccacttgtccatggaatgccatctgtcatgtttctcatctcacacaactgccctatgttgtcaggtttctcatcctattcacgatcaatgcttttatctaacaaatgagcacaagagaaagctcaaggaagaacatggtcagtaaaaaatactgatgtcttttgtaatttgttctcacttactgatatatattgttcatttcatatgcaggaattgagccttggacatttgaacagaaacttggtgaggctgtgtttatcccagcaggatgtccccaccaagtcagaaatttgaaggtatgctatgacagacatggaagcagtttccaactgtccattaccattgctgttaataccatgtgttgaattaaaatggaccaatcttatctgtggtattattctttttaccaacctgctttttttttcccttttattggacagtcatgtataaaggttgcacttgactttgtttctccggaaaatgtgcaagagtgcatcaggctgacagaagaatttcgcttgcttccgaagggtcatagggtgaatgaagataaactagaggttagctaatccttttatccgcagttccatactcttctgcacacatatttgaataatttgacaactgtgatagctctagcactatgttttatagtttctccccttttgacattcatatctaattgaaccctgtgaatatgcatcaccaggttaagaagatagctctatatgcacttgatcaagccattgacgatatcacaggcaaaagttgcaatgaaaggttagtggggacagctctgcatattgtatcaacttaggtcttgttacagaatatatttctatcaccccccacaaaccacacgcacacacagagagagaaccaaaaagacatatttctgttgattgtaacaattttccatgggtactgattcagtttgattatgctgagtgaagtattcaagtatcatacttttttctgtcatctcttagtttactcggtttatgtgtgctgcttaagcttccaaagcttgccaacttttacatgcccacttgcacaccttccttaagggcataaagtaacgctgcaagctgcactggtgtttttctattctgctttcctactgcaatgctacccaagatttttgttgcaaggctgcttttgtctgaatatagttagtactgtgttagtatttctgtgtactgcggttccatgtatcaaaactgtttcaagggaaattcaatgcaacgtcccattctgcaggccaaaactgtttgcccacaaaacatttctggtaaaataagattgctcttctgaaagaacaagttctgtacctctaggtgctgttgaaaagcaggatctgcttaaatattagacaagtttgctctccaaaattcaccattttttacgtaaacgaaacactatttcctggttctgacaccctctttccatgattaatcaggctaggattattcaaacctttggttgggtaaaatgatatatatttatcttgatgtgattggatgttgcaatgacaataatcttgcattctaccaggacaaaggatgaaggggaagaggaggcgtctgccccaagtgttagttaa</dnaseqindica> |
| External Link(s) |
