Difference between revisions of "Os02g0120000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0120000| Description = Protein prenyltransferase domain containing protein| Version = NM_001052240.1 GI:115443850 GeneID:4328108| Length = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0120000|
 
GeneName = Os02g0120000|

Revision as of 19:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0120000

Description

Protein prenyltransferase domain containing protein

Version

NM_001052240.1 GI:115443850 GeneID:4328108

Length

2452 bp

Definition

Oryza sativa Japonica Group Os02g0120000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1047669..1050120

Sequence Coding Region

1048480..1049682,1049783..1050070

Expression

GEO Profiles:Os02g0120000

Genome Context

<gbrowseImage1> name=NC_008395:1047669..1050120 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1047669..1050120 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcggtggcggcgtcgctctcgaccccggcgccatcgccggcggccggggggaggggccggaggagggtgaacgtggcggtggcgtccctgcggcgggcggcggcgggaggtggctcgagctggcggagcgagcggcggctcatgtcggagctggagcgcacggtgacgcccggcgcggcggagcgcgtcatccgcagctacgtcgcctccaagtcggagcgcgccgccctcgccgcgctctcccgcctgctcatggactccgaccccttcgccatcccgttctacgaggtggtcacccaggcgcggtggttcaagtggagctccatccacgccgccgccgtcgccgcgctgctcgagagcaatggcagcgcggaggaatcaagatccctcatctccgactccatctcgcgcctccactccacctcctcctcctccgaggaggtgtccctcttctactgcgacctcatggcggccttctcctcccgcgggatgcgagaccgggcgatggatttctactcccagctgcgagcctcgccgccgctgtccgggaagaagacctacacggcgatgataaaatctctgtgcctgatgggcctcgccggcgaggcggaggcggcgctgagggagatggcgtctcgggggcaccagccggaggcgttccagttcggattggtggcgaagtgctacggcaaggcgggatccatggccgagatggagagggtgatctcgtccatgtccgacgccggcatccgcctcggcaccggcgcggcgaacatcgtgctctcgtgctacacctcctgccgtgaccattccaggatgctggcatggctgaggaggatgaggaagctgcggattgcgccgacgacgaaggccttcaactttgtgctcaactcatgcccaacagtagcttcgatggctcaagaattgggggaatcactgccattgtcaacggctgagttggtcaagaagctcaggtctgcatctcaatggccagcagaagctgagctggtgcaggagctcctgacatcctcttcggtgctcgacaaggcgatggattggtcggagtcggaggtgaagctgaacctccatggattcagcacaattgcagcctatgttttgattttgcagtgggtggatgcgatgaaggcgcgccgcgcattgccattggaggtgtcagtggtgtgtggcattggcaagcacagcgatgtcagaggtgagcccaaggtgagggagctggctcaggaggttctgagcaggatggggagccccctgaggctgtccatgaggaacaaaggccggcttgtcgccaagcgcgacagggtgaagcaatggctggccactgactggagctctccggtggatgaggagagcacagatcaatcacctaatggggacaaccagcaaccatttttacttacactcatgagaaaactaggacaggttctgtcaccatttctgcagttctcaaagggtaaagcataa</cdnaseq>

Protein Sequence

<aaseq>MAVAVAASLSTPAPSPAAGGRGRRRVNVAVASLRRAAAGGGSSW RSERRLMSELERTVTPGAAERVIRSYVASKSERAALAALSRLLMDSDPFAIPFYEVVT QARWFKWSSIHAAAVAALLESNGSAEESRSLISDSISRLHSTSSSSEEVSLFYCDLMA AFSSRGMRDRAMDFYSQLRASPPLSGKKTYTAMIKSLCLMGLAGEAEAALREMASRGH QPEAFQFGLVAKCYGKAGSMAEMERVISSMSDAGIRLGTGAANIVLSCYTSCRDHSRM LAWLRRMRKLRIAPTTKAFNFVLNSCPTVASMAQELGESLPLSTAELVKKLRSASQWP AEAELVQELLTSSSVLDKAMDWSESEVKLNLHGFSTIAAYVLILQWVDAMKARRALPL EVSVVCGIGKHSDVRGEPKVRELAQEVLSRMGSPLRLSMRNKGRLVAKRDRVKQWLAT DWSSPVDEESTDQSPNGDNQQPFLLTLMRKLGQVLSPFLQFSKGKA</aaseq>

Gene Sequence

<dnaseqindica>439..1641#51..338#atcttgtgacgcgccaaccgcgtcgctcgcgagcagcgcagcagccagccatggcggtggcggtggcggcgtcgctctcgaccccggcgccatcgccggcggccggggggaggggccggaggagggtgaacgtggcggtggcgtccctgcggcgggcggcggcgggaggtggctcgagctggcggagcgagcggcggctcatgtcggagctggagcgcacggtgacgcccggcgcggcggagcgcgtcatccgcagctacgtcgcctccaagtcggagcgcgccgccctcgccgcgctctcccgcctgctcatggactccgaccccttcgccatcccggtgcgcgtgcggcgtgcgtgagcgcgtcccaaattattcttgtgatttcttgccgatttcgcgtcacgaatttggggtgggatttgatttctcgctgcagttctacgaggtggtcacccaggcgcggtggttcaagtggagctccatccacgccgccgccgtcgccgcgctgctcgagagcaatggcagcgcggaggaatcaagatccctcatctccgactccatctcgcgcctccactccacctcctcctcctccgaggaggtgtccctcttctactgcgacctcatggcggccttctcctcccgcgggatgcgagaccgggcgatggatttctactcccagctgcgagcctcgccgccgctgtccgggaagaagacctacacggcgatgataaaatctctgtgcctgatgggcctcgccggcgaggcggaggcggcgctgagggagatggcgtctcgggggcaccagccggaggcgttccagttcggattggtggcgaagtgctacggcaaggcgggatccatggccgagatggagagggtgatctcgtccatgtccgacgccggcatccgcctcggcaccggcgcggcgaacatcgtgctctcgtgctacacctcctgccgtgaccattccaggatgctggcatggctgaggaggatgaggaagctgcggattgcgccgacgacgaaggccttcaactttgtgctcaactcatgcccaacagtagcttcgatggctcaagaattgggggaatcactgccattgtcaacggctgagttggtcaagaagctcaggtctgcatctcaatggccagcagaagctgagctggtgcaggagctcctgacatcctcttcggtgctcgacaaggcgatggattggtcggagtcggaggtgaagctgaacctccatggattcagcacaattgcagcctatgttttgattttgcagtgggtggatgcgatgaaggcgcgccgcgcattgccattggaggtgtcagtggtgtgtggcattggcaagcacagcgatgtcagaggtgagcccaaggtgagggagctggctcaggaggttctgagcaggatggggagccccctgaggctgtccatgaggaacaaaggccggcttgtcgccaagcgcgacagggtgaagcaatggctggccactgactggagctctccggtggatgaggagagcacagatcaatcacctaatggggacaaccagcaaccatttttacttacactcatgagaaaactaggacaggttctgtcaccatttctgcagttctcaaagggtaaagcataagagaagcacctctcttatgtaggtttttcagatagtttggtctttggatagttcagcatctttgccatgctgtagattgatacaagcattgtcttggtctagtgaatcctaagttctagttctgatgccgaaatgctatgcgtcggccagctgcttgaaggttatgggactgacaaaccgtgctgccccgtcatagaaggcaaggcctacaatcttggaggtggcctgggtagggtggaggagatcccagaagagatatctgctacggtcagcgcagcagctggagctgggggtacaggcttcctcggcgttgaacttgccaccaccaccacagcatgcactcttcacctctacaaaccctgaaatcaatcagcaagtctgtgagatctcagatatagctgaaaagtagacggttacaattcaattcatgctaagtagaactgtgacaatgtttgaggtgtgagttccaggtcatattactctttgcttaaactgaggtaacttaccagcagcttgtggattttcaattaggctggagataagttcataggagctggcaatggagtacttcattccctgcatttcggagctgaggtcacggaacaggtcccggatttcgccgttcagtctcttggccaactggtttagcggttcgaagcactctccggtcgggttctgacttctcaaatatgggcagcacccgagtaatggcacattgatcactgcaaacttccttgctcctaaattgtataatgtctacaagaatacttcaacagttactaacttaataaaacataatttgtttgccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0120000, RefSeq:Os02g0120000