Difference between revisions of "Os02g0169400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0169400| Description = Similar to Argonaute 4 protein| Version = NM_001052556.1 GI:115444482 GeneID:4328436| Length = 6982 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0169400|
 
GeneName = Os02g0169400|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0169400

Description

Similar to Argonaute 4 protein

Version

NM_001052556.1 GI:115444482 GeneID:4328436

Length

6982 bp

Definition

Oryza sativa Japonica Group Os02g0169400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3748508..3755489

Sequence Coding Region

3748703..3748887,3749010..3749041,3749126..3749220,3749312..3749385,3749474..3749606
,3749702..3749765,3749948..3750010,3750101..3750243,3750358..3750495
,3750570..3750691,3750798..3750963,3751058..3751180,3751325..3751396
,3751484..3751591,3752730..3752846,3752953..3753040,3753162..3753253
,3753378..3753490,3753994..3754127,3754209..3754564,3754649..3754861

Expression

GEO Profiles:Os02g0169400

Genome Context

<gbrowseImage1> name=NC_008395:3748508..3755489 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3748508..3755489 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagtcagagaatgacctggctctacgatcgtcaccactccttgaaacataataaagctgaaagacaagccattctatcaacttatagattagcaaaacgtccaaatctctcttcagaaggtatgattggcgaaagttgcattgtgaggacaaattgtttcagtgttcatctggagtctttggatgatcagactatctatgaatatgatgtatgtgtcactcctgaggttggaatcaatcgtgctgttattagagagttggtaaaacagcagaaagattctggtttgggtggccgtcttcctgcctatgatggaaggaagaggctatacacatctggtccattgccatttgattcacatagatttcttgttctgctggatagtattgaagacagtcctgaagagtcaaggcacttgagagtgagagattttgtggtcactttaaaatttgctgcaaaaatttccttatggactttacgcaagttccgtggtgggaagccaaaccgagaaagtcgagcggccctgcgagcacttgacgttgttctaaaggaattacccactgcaaggtatacccaatttgctggttcattttactcacctaacttaggagaatgccgacaattgtgtaaggtcttggaaagctggcgtggttttcaccaaagaatacaagctactcagatgggacttcaactgaatatcgacgtgtcatcatcagtgttcatcaagcctgtacctgtggttgactatgttgcacagcttcttaacgaggacatcttattagacagaccattatgtagcactgagttcttgaagattaaggaggctctagaaggtctgaaggttcagattaatggcattttgttcaacacatatcatgtacaagaccttgtccatcaagcagcaagttttccagttaactttagtattcagtacccatctttgccttgcttgaaagtggctcattttggggagacaatatttctgccattggaggtctgtaaaattgctgagggacaatgtcaccagaaacagctcaatgcaaaacatatggctgctcttcttcaggtagctcgacagccccctaatgagcgtgactacaacattctgcagactgtgcatcagaacaaataccaggaggacccacatgctaaagagtttggcattaaaattgaggaaaaacttgtatcaattaaatctcgcatcctacctgctccttggcttaaattccatgacagtggcgagacgacagaattcttgccacaacttggcatatggaatatgatgcataagaaaatgatcaatggtgggagagtgaaaagctgggcatgtgttaacttttgctggagtgtacgggagtatgctgctaggaatttctgttatgaccttggctttatgtgccgagaatctgggatggtcttttcagttaaacctgtgcttcctctagtgattgctaaacctggatgtgtagaatctgcactcaggacacttcatgacgatgtcatggacatacttagaccacagggcagaaaacttgacctgctgattgtaatattgcctaacaacaatggatctctttatggtgatgtcaaaagaatatgtgagacagatattggactgatctctcaatgttgtcttgcaaaacatgttcttaagatgaacaagtggtatcttgcaagcgttgcccttaaaatcaatgctaagatgggcggaagaaatactgtactggttgatgctttagaaatgagactcccccatgttagggatacaccaactattgtatttggtgctcatgtcacccatccacatccaggaaaagctaatagttcttccattgctgctgttgttgcttctcaagactggcccgaggttaccaagtatgctggtttaatcagtgtgcaagcgtgccaccaggagtcaatacaaggtctttttaaagtccaggatgatccggaaagaggaaccacaactagcggaatgatcaaagagcatctcatgtctttctatcgagccactaaacggaagcccggaaggattatattttacagggatggtgtgagcaaaggacagctccctcaggctttgatgcacgaacttggtgccatcaaaatggcgtgtgcatctatgggacccgattataatccattagttacatacgtggtgctccagaagtgtcgccatacacgtctgtttgctgactactataatgcgaatactcatgattcaactgcaaacatacgggctggtactgtggttgattcaaatatttgccaaccaaatcagtttgatttctacttgtgtagccaccgcagcacgcagggaactaagcggcccaggtattatcatgttctgtgggacgagaacgacttcttggctggttctttccaagagctcacaaactacctctgctacacctccgcaacttgcacccaatccatatcagttgtggcccctgtgcactacgctcgtcttctgtcatcacgagctcgatgttacattaaaccacgctcgattggcgattcaacgagccacacctccttgccttctgaagaagatagcagcgcagcctcagagactggcagtcttcttcctataaaggataatttgaaaggggccatgtttttctgctag</cdnaseq>

Protein Sequence

<aaseq>MESQRMTWLYDRHHSLKHNKAERQAILSTYRLAKRPNLSSEGMI GESCIVRTNCFSVHLESLDDQTIYEYDVCVTPEVGINRAVIRELVKQQKDSGLGGRLP AYDGRKRLYTSGPLPFDSHRFLVLLDSIEDSPEESRHLRVRDFVVTLKFAAKISLWTL RKFRGGKPNRESRAALRALDVVLKELPTARYTQFAGSFYSPNLGECRQLCKVLESWRG FHQRIQATQMGLQLNIDVSSSVFIKPVPVVDYVAQLLNEDILLDRPLCSTEFLKIKEA LEGLKVQINGILFNTYHVQDLVHQAASFPVNFSIQYPSLPCLKVAHFGETIFLPLEVC KIAEGQCHQKQLNAKHMAALLQVARQPPNERDYNILQTVHQNKYQEDPHAKEFGIKIE EKLVSIKSRILPAPWLKFHDSGETTEFLPQLGIWNMMHKKMINGGRVKSWACVNFCWS VREYAARNFCYDLGFMCRESGMVFSVKPVLPLVIAKPGCVESALRTLHDDVMDILRPQ GRKLDLLIVILPNNNGSLYGDVKRICETDIGLISQCCLAKHVLKMNKWYLASVALKIN AKMGGRNTVLVDALEMRLPHVRDTPTIVFGAHVTHPHPGKANSSSIAAVVASQDWPEV TKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGMIKEHLMSFYRATKRKPGRIIFY RDGVSKGQLPQALMHELGAIKMACASMGPDYNPLVTYVVLQKCRHTRLFADYYNANTH DSTANIRAGTVVDSNICQPNQFDFYLCSHRSTQGTKRPRYYHVLWDENDFLAGSFQEL TNYLCYTSATCTQSISVVAPVHYARLLSSRARCYIKPRSIGDSTSHTSLPSEEDSSAA SETGSLLPIKDNLKGAMFFC</aaseq>

Gene Sequence

<dnaseqindica>6603..6787#6449..6480#6270..6364#6105..6178#5884..6016#5725..5788#5480..5542#5247..5389#4995..5132#4799..4920#4527..4692#4310..4432#4094..4165#3899..4006#2644..2760#2450..2537#2237..2328#2000..2112#1363..1496#926..1281#629..841#atcgttgctcgaatatttccccgtccgctgtgcgtcgactccgactgctcgtgtgttcgcccgccgccgccgattcctatccatctcgcgagcgagcaggggcgccgtcgttcgtcctgctgcttccgccgcatccatcctggtgagcacccatccgttatacacgctctttccgatctctctctctacccacgcacttctactcgaatttgcgttaaaccctagcctctgttctgtaaatttgccctaaccttaatactaataacaatttgcctttactgtttttcttccttcatcttagctctggggggatcgatttcgtgtttgcctctctttagatagaatttttcccccaatgttcgagtgcatatattggtctggtcgggcaatcccttttatcttccttcattcatttacctgaaaacaacggcgtatcgtaccttttgcttttccctgtgctgttgtgaatacaagtgtggaggtcactgcaatgctgtgctgttcgtgaaaattgatgatgccactctagttttcaactgtcgatgtgtcttgatgcttcagtctctgatcattgctattcttaccgcttacagtgctaaagtttgtaccttgccttggaacattagtcatggagagtcagagaatgacctggctctacgatcgtcaccactccttgaaacataataaagctgaaagacaagccattctatcaacttatagattagcaaaacgtccaaatctctcttcagaaggtatgattggcgaaagttgcattgtgaggacaaattgtttcagtgttcatctggagtctttggatgatcagactatctatgaatatgatgtaagtttctgattcacataacttgtctataacatgaaatttatttgcgccattagtattcgtatctgatgttatttttatcaggtatgtgtcactcctgaggttggaatcaatcgtgctgttattagagagttggtaaaacagcagaaagattctggtttgggtggccgtcttcctgcctatgatggaaggaagaggctatacacatctggtccattgccatttgattcacatagatttcttgttctgctggatagtattgaagacagtcctgaagagtcaaggcacttgagagtgagagattttgtggtcactttaaaatttgctgcaaaaatttccttatggactttacgcaagttccgtggtgggaagccaaaccgagaaagtcgagcggccctgcgagcacttgacgttgttctaaaggaattacccactgcaaggttagctttcgttctcactgtgttccgttttccgtctttctgtattattattattcccattcaataattttgcatattcaggtatacccaatttgctggttcattttactcacctaacttaggagaatgccgacaattgtgtaaggtcttggaaagctggcgtggttttcaccaaagaatacaagctactcagatgggacttcaactgaatatcggtcagatcccaactattcatcgtggttttgtatttcagacctgagaatgagaatttctatgtcgccccttctgaaattgatcttgctttgattgagttgaacttcttataagtaataaggtacaagtggtaatgaagaaaaccgtaagattgttcatattgaaaccgtttcatatgttgtgtattaggaacacatgtcctcaataattaccgttcagtataaaatatggttacatgtttgtaccatttccgtaaatgcttgaagctgcaatatgaagtatgatacattgcagaaatcttaaggtttcctaatttatttctacttttttttgggaataatattttatttctactttaataagctcactagcattttatgcatgctaagggccaagaatgcatgttcactgtattcctatatacatcatatagtgggataagtacgtcttgaacttgcctctggtctttttccatgtcttgaggaagtttagtactctattgcagacgtgtcatcatcagtgttcatcaagcctgtacctgtggttgactatgttgcacagcttcttaacgaggacatcttattagacagaccattatgtagcactgagttcttgaaggtcaggtcgttttgtcatcctatttaatcacaaactgatcattgctattctgttacttagtacttgatttaaattcctgtgttcactccattacaagattcactttttttcccctctttgttagattaaggaggctctagaaggtctgaaggttcagattaatggcattttgttcaacacatatcatgtacaagaccttgtccatcaagcagcaaggtatttactgtatgcacttgctttcacacataaaaatattctcttgtgtctatagttctgctctaaataggccatctatgatgataataggttaatgctattttggtttttcctgcaacagttttccagttaactttagtattcagtacccatctttgccttgcttgaaagtggctcattttggggagacaatatttctgccattggaggttagtatcctgagcgaacatttattctacaatatccaacaatattaagaatggacacacactatcgtcttataaaaactgcttcttatcaccttctgtattctaggtctgtaaaattgctgagggacaatgtcaccagaaacagctcaatgcaaaacatatggctgctcttcttcaggtagctcgacagccccctaatgagcgtgactacaacattctgcaggtaacctgatacaaaaatttctacattcagtttatgtttgtttaggatttcttttaaatattttagccatgtcaataacattaagtggatcagttcaatctgcaaacttccacaagttagttataaatatcatatcatgtcatatcatggatttttttcgatgataatcaaaagacctacatgaggatgtgcttaaggtgatcatgctgtcatccttatgcacaagatttatgttatgctattaacatgtcatgagcagtgagcactagaagatcatacatatttaggagtataaactggcataatctgatctaaatgtggcacctaagccctttcgcaaacaacctaactcctagagccaccatagcagatgcttgaatacgtgcatgtatacgtgttgggaagaggagagtggtccttcactgattttttttaaaaatatttttggaggcaaccctaccactccgcctcagagtgagtatgggtcttatgggtggagaccttttatattagatggaacataaaaattatactaacatgaatgaaggcaaaaggtattggtttgactcaaaagtatttggggctaaaccggttgcctcaaatttgcataccccccggcttggcttaaagaatgatattgaggtaaacgaacatttacctcaaagtactgttcagaggctaacacattacctcagaatttaatttgaactttgaagggaaccaacttgtatgagccttaggatgcacctctgttgtgttctttgttgtagtgacatttttcattattgttagatttttgagattgtgcacacagatatttcttgtccatatgaaaataagctgtttgtcgcaccacttgtaatttgttttgtgatcttgaagttttattatctactatcatcaggcttcagttttctttatcatggccattgactattttcatgcatttgacatggcatatcaacaacccaaatttgcttaacaggtgcgattctaatatgaaaacagattatttaaagtaggccaccatatgcggattaaagtttccagttttacatgtaattagttatcatgttcttttggaaaagaacatattatgctctagattttcttatcatgttatgtctttggttaccagactgtgcatcagaacaaataccaggaggacccacatgctaaagagtttggcattaaaattgaggaaaaacttgtatcaattaaatctcgcatcctacctgctccttgggtatgtcttaacagtcatttacatatgctgattgcgatgtctgttgcatgtgttatgctgtaggtctgacttttctttttctatcagcttaaattccatgacagtggcgagacgacagaattcttgccacaacttggcatatggaatatgatgcataaggtactgaggtgacatatattgtgcatttctccttccaaattatttgtttttcagaactgttgtgattatattttacagaagtttctatctttggcaatattgcatacagctgcaaattaattttatggtaatgctttgttgtagaaaatgatcaatggtgggagagtgaaaagctgggcatgtgttaacttttgctggagtgtacgggagtatgctgctaggaatttctgttatgaccttggctttatgtgccgagaatctgggatggtaggttctctatgacccaaaaggtgattccattttttttacctcacagttattcacaattttgacctttcatattccctatgtctcaatgtaggtcttttcagttaaacctgtgcttcctctagtgattgctaaacctggatgtgtagaatctgcactcaggacacttcatgacgatgtcatggacatacttagaccacagggcagaaaacttgacctgctgattgtaatattgcctaacaacaatggatctctttatggtataccttttactttgtaacacatgtgggcagtttctttatgtaatacatgtgagcattgactgatcaattaatggtttttatttaatgtacttgtcatccacaggtgatgtcaaaagaatatgtgagacagatattggactgatctctcaatgttgtcttgcaaaacatgttcttaagatgaacaagtggtatcttgcaagcgttgcccttaaaatcaatgctaaggtttgttgtgctgtactatttgcttgactggtcattcatcaggtccttatttattcctttggttgtgtacgtagatgggcggaagaaatactgtactggttgatgctttagaaatgagactcccccatgttagggatacaccaactattgtatttggtgctcatgtcacccatccacatccaggaaaagctaatagttcttccattgctgctgtaagtgcacatctcactatttaagacgccgttgcctggaggcaggagtcctgcttatctataacttttaagtgtatatgtgtgctatatgtagcaattgcatgttttatgcaggttgttgcttctcaagactggcccgaggttaccaagtatgctggtttaatcagtgtgcaagcgtgccaccaggagtcaatacaaggtctttttaaagtccaggatgatccggaaagaggaaccacaactagcggaatgatcaagtacgaatgattgtgttaccttttagcatgtgaatactatacttgaaaggtctttgtagtctatgtacataagttttgtcttatatgcagagagcatctcatgtctttctatcgagccactaaacggaagcccggaaggattatattttacaggtattaatctatgtctggcgaattgcctcatcttttcattcttttcattttttagataagggagctttattgatcacaaacgattacaccgaggtgatagaatcatacagagaacactcctggccggactcatctcttctatgtctacatatttgacattattccacgactgctctcttcagggatggtgtgagcaaaggacagctccctcaggctttgatgcacgaacttggtgccatcaaaatggtgaagtttttatcccacattttctttctgaacatttttgtgatgagcactgcattctatttctttgaaatgataaatttgtgccataaaaacaggcgtgtgcatctatgggacccgattataatccattagttacatacgtggtgctccagaagtgtcgccatacacgtctgtttgctgactactataatgcgaatactcatgattcaactgcaaacatacgggctggttagttgccaatttttgtttgctgtactgcctatcttgtcaaacctaaaaccttcttcctaacccctgtgaatttgtccaacttcaggtactgtggttgattcaaatatttgccaaccaaatcagtttgatttctacttgtgtagccaccgcagcacgcaggttgagcttagttcttctttacccaaataattctttttctttttttttcatttgtaacacgctcctagctgattcaaaattttcccattagggaactaagcggcccaggtattatcatgttctgtgggacgagaacgacttcttggctggttctttccaagagctcacaaactacctctgctacacgtaagaatgccacttgttatgtgtttttacatttttgaaatcccttgaccggtttaacggacgagttgtcacctattattgcagctccgcaacttgcacccaatccatatcagttggtaagcacgagcccccacattctcctactatcatttactgtaggaaatgtgcttttcctctagcaaaagcatatatggttacgatatatattcacacctttttcttcttttgcactctgcagtggcccctgtgcactacgctcgtcttctgtcatcacgagctcgatgttacattaaaccacgctcgattggcgattcaacgagccacacctccttgccttctgaagaagatagcagcgcagcctcagagactggcagtcttcttcctataaaggataatttgaaaggggccatgtttttctgctagaactgctgccagcaagatctgctgtcattttgtacgtggtctgtacagtcccacagttcttggtagatttgactgagcagtcaaaactcattatcgttcagcgagattcaggtgtagcagctgtaggattactgataaacattgttcctgtaccgatactttagaagaaatgaattaattatatcttagaacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0169400, RefSeq:Os02g0169400