Difference between revisions of "Os02g0178000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0178000| Description = Similar to SNF1 related protein kinase-like protein| Version = NM_001052608.1 GI:115444586 GeneID:4328489| Length = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0178000|
 
GeneName = Os02g0178000|

Revision as of 19:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0178000

Description

Similar to SNF1 related protein kinase-like protein

Version

NM_001052608.1 GI:115444586 GeneID:4328489

Length

3045 bp

Definition

Oryza sativa Japonica Group Os02g0178000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4306892..4309936

Sequence Coding Region

4307204..4307278,4307387..4307461,4307559..4307621,4307715..4307819,4307917..4308024
,4308123..4308260,4308357..4308446,4308533..4308658,4308728..4308781
,4308865..4308936,4309060..4309167,4309272..4309343,4309456..4309518
,4309747..4309908

Expression

GEO Profiles:Os02g0178000

Genome Context

<gbrowseImage1> name=NC_008395:4306892..4309936 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4306892..4309936 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtttgtggagagcattgggaggtacagggttggccggaccatcggcgccggcacgttcgccaaggtcaggctcgccgtcgacgccgacaccggcgccaccgtcgccgtcaaggtcatcgacaagaggatggtgatccgcaacaacctcatgtaccaggtcaaaagagagatcacggccatgaagctcctcaaccaccccaacattgtcaagatatatgaggtgatcgcgacgaagacgaagatatgcctggtaatggagtatgtctcaggagggcagctatctgacaagctaagttacctcaagaggttggatgagaaggaagcgaagaagtatttctaccaattgattgatgctgtagactactgccataggagaggtgtctaccacagagatctcaagcctgagaacttgttggtagataatcaaggcaatctcaaggtatctgattttggcctcagcgtgctaaaaaagccaggacagtttctatccacatcttgtggctcaccatgctatgtagctcctgaggtgattcagcacaagagttatgatggggcagctgcagacgtctggtcttgtggtgtgatcctgtttgaacttcttgctggttatctaccatttcaagactgcagcttaacaaacttgtacagaaggatatctcgagctcagtttgtttttccacaatggctcagtgtccctcagaagaagattataatcaggatactggatccatctcctataacaagagcaaagataagcgatatttttgatgataagtggctccaagatcactgcaatccatcagcaaggattgagaatgatgatgattgtgatgttattgaagaggccagcacagacagtgatagcagtcacaacacagaggtaaaggaaactgaagagatgacggcagaaactgaccgattcattaatgccttccaattgatagcgagatgcagtgatcttgacttgtcaggtctcttccaggagcagaaaacaaagctcgcctcgccacacccagtacaggaaaccttcgacaagatcaaggttgcagccaaggatgtgagcatggcagtgaagagaatgaacagctctctggtggagattcaggacagcaaattactaccaagaagcaatcttgatcttactctgtcggccgaggtgatcaaggtaacaccagctcactgcgtcgtcgaggtgtccaaatcaactggggatctgagatcatacaaagagttctgtagaagcctatcaagcttgctcaatggtggacagctgtctgcaagctcatctgatatggagtgtgattaa</cdnaseq>

Protein Sequence

<aaseq>MGFVESIGRYRVGRTIGAGTFAKVRLAVDADTGATVAVKVIDKR MVIRNNLMYQVKREITAMKLLNHPNIVKIYEVIATKTKICLVMEYVSGGQLSDKLSYL KRLDEKEAKKYFYQLIDAVDYCHRRGVYHRDLKPENLLVDNQGNLKVSDFGLSVLKKP GQFLSTSCGSPCYVAPEVIQHKSYDGAAADVWSCGVILFELLAGYLPFQDCSLTNLYR RISRAQFVFPQWLSVPQKKIIIRILDPSPITRAKISDIFDDKWLQDHCNPSARIENDD DCDVIEEASTDSDSSHNTEVKETEEMTAETDRFINAFQLIARCSDLDLSGLFQEQKTK LASPHPVQETFDKIKVAAKDVSMAVKRMNSSLVEIQDSKLLPRSNLDLTLSAEVIKVT PAHCVVEVSKSTGDLRSYKEFCRSLSSLLNGGQLSASSSDMECD</aaseq>

Gene Sequence

<dnaseqindica>2659..2733#2476..2550#2316..2378#2118..2222#1913..2020#1677..1814#1491..1580#1279..1404#1156..1209#1001..1072#770..877#594..665#419..481#29..190#aagttgggagagagagggagacggcgagatggggtttgtggagagcattgggaggtacagggttggccggaccatcggcgccggcacgttcgccaaggtcaggctcgccgtcgacgccgacaccggcgccaccgtcgccgtcaaggtcatcgacaagaggatggtgatccgcaacaacctcatgtaccaggtgatgatcatgatcatgatgaacaattcatctgtgtaatttatcatttgttgtttcgtggttagtccattgatcgatcgatccaggcacgaatagatagataggttcttcttttttaggtaatggaaatgatgatttacatcccttgcttctaccataaaatatacaaccataagtttgttcttgatcgatcgttaattagtttgcatgatctggattttggtgaaggtcaaaagagagatcacggccatgaagctcctcaaccaccccaacattgtcaagatatatgaggtgattaagcttggttactaattacccgtatcagcatcagggtttcagccgtatcagcatcagggtttcaggaggaatggaggattatattataccttttcttcctgtgcaggtgatcgcgacgaagacgaagatatgcctggtaatggagtatgtctcaggagggcagctatctgacaagctagtaagacatcatgcataatcaattaaccagcatgtaattctagtctgattaactcagctaatttttcttgcaattcctgatctttcttttcttctgggtttaagagttacctcaagaggttggatgagaaggaagcgaagaagtatttctaccaattgattgatgctgtagactactgccataggagaggtgtctaccacagagatctcaaggtcaagaaatcaagatattgctgctctcatttcattaattgctatccctgttttaatcatctcgatcccttcatcataagctataatttgctgatttatagcactttctgatgatgtaaacagcctgagaacttgttggtagataatcaaggcaatctcaaggtatctgattttggcctcagcgtgctaaaaaaggtaaaagctagcaaacattatcagcatcaccgaatgattcatattcaactctgaaaatctgtgtttaaatttctttgatccagccaggacagtttctatccacatcttgtggctcaccatgctatgtagctcctgaggtaggacaagtttcttgcagaagttttagtcatttgcattgccaacttatgattcagattgtttgacaggtgattcagcacaagagttatgatggggcagctgcagacgtctggtcttgtggtgtgatcctgtttgaacttcttgctggttatctaccatttcaagactgcagcttaacaaacttgtacagaagggtaaacatccgaatacgataccgccttttactctactgtctgttactgatttcagatgtcctaactgaaaatatttctcttgaaagatatctcgagctcagtttgtttttccacaatggctcagtgtccctcagaagaagattataatcaggatactggatccatctcctataacagtaagctatgataaatacttatgtagcactatgtaagcattggatggttgccgacctttattttgctgataacaccataccttaaatgttctttagagagcaaagataagcgatatttttgatgataagtggctccaagatcactgcaatccatcagcaaggattgagaatgatgatgattgtgatgttattgaagaggccagcacagacagtgatagcagtcacaacacagaggtaatttgatacagtttggaacttactccattctagtagttcttacctctcaaccagtctttcctgttggtagttgctaagattgcccttgtatctaggtaaaggaaactgaagagatgacggcagaaactgaccgattcattaatgccttccaattgatagcgagatgcagtgatcttgacttgtcaggtctcttccaggagcaggtgcactaagctttagaatagattactttcacaaattacctacaccaatacacggcagtaaactaagatccttgattgattgaccgatgttttgcagaaaacaaagctcgcctcgccacacccagtacaggaaaccttcgacaagatcaaggttgcagccaaggatgtgagcatggcagtgaagagaatgaacagctctctggtaattcatctcaccaacatatggtttcagtttctccaatgaaattatcaaattccaggtgaaatttttagtccaattctcattatgtcacaggtggagattcaggacagcaaattactaccaagaagcaatcttgatcttactctgtcggccgaggtgagatatcctttctgaaatcacttccatcatgtgtagtgtgtcctttttctgttgctcagggattgaagcttacctgaaaagtgagaaattgcaggtgatcaaggtaacaccagctcactgcgtcgtcgaggtgtccaaatcaactggggatctgagatcatacaaagaggtttgttagtgttatgtttttgtttcagatcaatttggctccacctcaagatagtacgatgcacaatttactgaacggaaatgcaatgcatatgatgtcaacttgcagttctgtagaagcctatcaagcttgctcaatggtggacagctgtctgcaagctcatctgatatggagtgtgattaatcaagttatgttctatgagtagatgaatcaatgaatcttcaattatcacaaactcatggagttcaggagcaaacaagagtgcctaccgggcaactggtgagtggtgacctgaaaaaaaggtgatgataaacaggactaaagtcattcatcgcccttctgccgtaaatgctggtgctgacgtgttgtaacttgtaccttcaactgtatgataaacaaaacatgttgcatgcaaagggaacatgcaagccatttccatgtattggattttttcccccctgaacttataattttcattattgtgcttttctaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0178000, RefSeq:Os02g0178000