Difference between revisions of "Os02g0184000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0184000| Description = Zinc finger, DHHC-type domain containing protein| Version = NM_001052640.1 GI:115444650 GeneID:4328524| Length = 815...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0184000|
 
GeneName = Os02g0184000|

Revision as of 19:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0184000

Description

Zinc finger, DHHC-type domain containing protein

Version

NM_001052640.1 GI:115444650 GeneID:4328524

Length

8157 bp

Definition

Oryza sativa Japonica Group Os02g0184000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4681427..4689583

Sequence Coding Region

4681834..4682298,4684250..4684398,4684479..4684557,4684827..4684925,4685004..4685081
,4685231..4685288,4685814..4685913,4686000..4686138,4686729..4686891
,4687046..4687126,4687268..4687380,4688253..4688393,4689212..4689511

Expression

GEO Profiles:Os02g0184000

Genome Context

<gbrowseImage1> name=NC_008395:4681427..4689583 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4681427..4689583 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcggagatcgaggtgctcgaggacaccaccgccgccgccgccgccccggccgccaccatcggaggcggagaggtcgcgggcgcgggcgcgggggaggagggggaggcggcggcggatgcggaggcgctcaaggacgacgtgtacacgggcgcggcgtacggggacctcgagaagctgcaccgcctcgtggagcgggagggccggccggtgacggagcccgacgccctcggctaccacgcgctccagtgggccgccctcaacaaccgcgtcgccgccgcccagtacatcctcgagcatggagcagatgtaaatgctatagaccatacagggcaaacagcactccactggagtgcggtacgtggtcatattcaagttgcagaactacttctgaaagaaggagctaaggtggatgccgctgatttatatggatatcagactacacatgttgcagcacagtatggtcaaacatcatatctttatcatattgttgcaaaatggaatgctgatcctgatgtccctgataatgatggaagaagtcctctccactgggctgcttataaaggatttgcagattctgtacgcctccttttgtttttgggtgcatatagggggcggcaagataaagaaggttgcactcctttgcattgggctgctatccgcgggaatttggagtcatgcactgtgctggttcaggctggtaaaaaggaggatcttatggtgcaagacaataccggcttaactccagcccaacttgctgctgataaaaatcatcggcaagttgcctttttccttgggaatgctagaagagtacatgagagaggatgtggtgggaacagttattttgggaaactatcaaaattaggactcgcccctcttctttggtgtattattattggcttaatttatatatatgtatattcagttatctcaggacaatatagcagtaatatgacattactatttgggttattttcatggttgggaattttccttgctactgccggattggttatgttctataagtgtagcagaaaagatcctggctacattgacaagaatacaagagatgcccaaaatcaaagagatgatgaacctttgttgaagaggggtctagacaaccctgaacttctggctggcaattggtctcagctatgtataacctgcaaaattgttaggcctgtacgctcaaaacattgctctacatgcgatcgctgtgttgagcaatttgaccatcactgcccttgggtgtctaattgcattggaaagaagaacaaatgggaattttttatgttcctgatcctagaagtttctgcaatgattattactggtgtgacggccgtcataagagtagtaggagacccagattctcctgcatcatttggtggatggcttaattattcagccactaaccatccttgggtggtgtcttttgttgtgatggatctctttcttttctttggcgttataactctaactgtagttcaagcatcacagatatccaggaatttaacaacaaatgagatggcaaatgccatgaggtatagttatctcagaggcccaggtggccgattcagaaatccatttgaccatggggtgcgtaaaaactgttctgacttcttgctgaaagggtacaatgaggatattgagagggtagaacagacattacaacctgatgaggaattgggaatgattcaaatgacaagaagtgcagtctcacagaatggcgagagcatgtcacttcatgctaatggcacagaccatggttgtgctgatccacaagggaactcaaaatcccatcgtcactcgcacggttcatcacaatgttgcagtcacagtaagagacctgacaagacccccttggggctaggattgggccttggtcgtaacaacccatctagccgctacacacgttcacttccttccattcattcggagagtagtgcttatttgcccttgtga</cdnaseq>

Protein Sequence

<aaseq>MASEIEVLEDTTAAAAAPAATIGGGEVAGAGAGEEGEAAADAEA LKDDVYTGAAYGDLEKLHRLVEREGRPVTEPDALGYHALQWAALNNRVAAAQYILEHG ADVNAIDHTGQTALHWSAVRGHIQVAELLLKEGAKVDAADLYGYQTTHVAAQYGQTSY LYHIVAKWNADPDVPDNDGRSPLHWAAYKGFADSVRLLLFLGAYRGRQDKEGCTPLHW AAIRGNLESCTVLVQAGKKEDLMVQDNTGLTPAQLAADKNHRQVAFFLGNARRVHERG CGGNSYFGKLSKLGLAPLLWCIIIGLIYIYVYSVISGQYSSNMTLLFGLFSWLGIFLA TAGLVMFYKCSRKDPGYIDKNTRDAQNQRDDEPLLKRGLDNPELLAGNWSQLCITCKI VRPVRSKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWEFFMFLILEVSAMIITGVTAVI RVVGDPDSPASFGGWLNYSATNHPWVVSFVVMDLFLFFGVITLTVVQASQISRNLTTN EMANAMRYSYLRGPGGRFRNPFDHGVRKNCSDFLLKGYNEDIERVEQTLQPDEELGMI QMTRSAVSQNGESMSLHANGTDHGCADPQGNSKSHRHSHGSSQCCSHSKRPDKTPLGL GLGLGRNNPSSRYTRSLPSIHSESSAYLPL</aaseq>

Gene Sequence

<dnaseqindica>7286..7750#5186..5334#5027..5105#4659..4757#4503..4580#4296..4353#3671..3770#3446..3584#2693..2855#2458..2538#2204..2316#1191..1331#73..372#gctaagccaaagccaagccacgcgcgacccaatcccccgatccctcctccccctccctccctccctccctccatggcgtcggagatcgaggtgctcgaggacaccaccgccgccgccgccgccccggccgccaccatcggaggcggagaggtcgcgggcgcgggcgcgggggaggagggggaggcggcggcggatgcggaggcgctcaaggacgacgtgtacacgggcgcggcgtacggggacctcgagaagctgcaccgcctcgtggagcgggagggccggccggtgacggagcccgacgccctcggctaccacgcgctccagtgggccgccctcaacaaccgcgtcgccgccgcccagtacatcctcgaggtatgatccatcgccgtcgcccaatccaatccgccccccgagcttgggtaatgctagtgtgtcctcgagcttgcgcgtttaggaattcggttttcctgccctttccccgatcagcaacggagctccccggtgatgtgttgtttgaggtgcagacgaagtgtagctcctgctgggaatgcgctgtgggggatgggcacgagttgtttagttgttgttgcgaatctcgtttggttttttggttggatcgatgaggagagattttggttcatgtggcttgtaatgacaggaaggtatttcgcttttgctctgagggtagcggttttgagcttagttttggtatgtttgtgtttatgtgttggatggatgttaatgctatgttggttgaatggtggctgttggataggtctaggcagggccaatctgcagctcctttagtgttaggaaaccctgtggaacttgcctcttgccatatcttaccaagcgagcaagcatttccaagaatttcgctgaaccataaatgggatcataggaagtttgttcagttaaatgtcatgtccagctgtttagacaatgaagccaacccctttgaaaccttgcttggattgatttgagtatgcctatgctgactggtctatcccagtcaacatgttatgcattgtgtcttttaaggccattggtttcacggttttatgttgaacagtgtagttatatagtacttcttgagttgcatggttttctttgctgctctatagtatgtcctatccttttcagttgtttgctttggtgggatgacggttctcagcttgttgtctggacagcatggagcagatgtaaatgctatagaccatacagggcaaacagcactccactggagtgcggtacgtggtcatattcaagttgcagaactacttctgaaagaaggagctaaggtggatgccgctgatttatatggatatcaggtttgtctttgacttatctattgcatccatggttccttaacacatatatattctctttctgttgtctaatgtattttgattaattcacctggtgaccaactgtttcttactcaagttatgttgcaatgtctctataatgattatgtggtacataatagtttaccattgctttgctgtataatccctatatcagtcactaagatgcttcaaattgtaatttcatacacattgatgctaggttgtatggcttcctgcaagataatgaaatcttttctctcgtcagataccataaaactattacttcctctagtaccccaaaagcatgttgttctagtaagtggcaaagagattaggaatttgtaacattgccatttttggcctttataataaatttaattacttctatctctaccataataatggttaggttgttaggatgggattaaaatgcacaagtattttacttctgtaatcagatcctatattttatcttttaattcttttagcatacagtcattttgtttttgagtttgagtgatctgcagggtttattaccgccttaagctagtcgccagggttgtcaacaaggtactaagtgaagtaggctatagacaaaacagagtcattacaaggataggtttcgaaaaaaaaaatttggcatattcactttgattcggaattaggtctttaattgaaatgtcagtctgtatttttttcctacatatgcagattagttcaacaataaagtaagatatctgcagtagataaattcccggtttgatcttaaaagttgggcagaaaaagtcaagagtcagtcagttaccttgtatttgaagtatttctgacggaatccatctgttgttataccacagactacacatgttgcagcacagtatggtcaaacatcatatctttatcatattgttgcaaaatggaatgctgatcctgatgtccctgataatgatggaagaagtcctctccactggtttgtacctttcccctgtacattttttttcaaagttcaaacacaagccttgtggtattctttatttttgtcacttaatgtgttgtctaacatggcttcatggtgcccctattgatgattcaatattgttcacatttccagggctgcttataaaggatttgcagattctgtacgcctccttttgtttttgggtgcatatagggggcggcaagataaagaaggcacgtgtttagttagtttttctagctcttcctaaaccctatctttatactgatcatgacaatctaacctacaacaagcatttaagcacgcttcccctgcattagttttgttggatatcaaatattcatttccagctcaaatgcttttcattaggttgcactcctttgcattgggctgctatccgcgggaatttggagtcatgcactgtgctggttcaggctggtaaaaaggaggatcttatggtgcaagacaataccggcttaactccagcccaacttgctgctgataaaaatcatcggcaagttgcctttttccttgtgagtgctatgaatattcaccattttttgtttatcatacatgagaatccttctagcttcccaagagtatccttttagcttcccaagattccatcataccgtaaatgttgccatctgattgggaatttaatagttctgttaatatgctttttggctgcttttccatttgtgccacctatttttggcttgttcttcattgacaattattttttatacctaatacgtagtagtaagcattactctcatgatgaatggatgtgctccacggccctgctatttcccaatagactctgtatattgcctgccacagtgccacttaccgttaattcttttactatatgaattaaaatgttttcttaaaataatatgcattgttaataacatggaggtaacaaagtaaaagtttttggataatcactagcatttgtggattgtgaatgctcttgtacttgttctggatattcttttaactattccccagtatagattatcttgcttaaaggtataaaacatttatcgttagcctcagcatgtaatttattcctggcaaatgctaaggattgatttgatgatttgattgttctatgcaggggaatgctagaagagtacatgagagaggatgtggtgggaacagttattttgggaaactatcaaaattaggactcgcccctcttctttggtgtattattattggcttaatttatatatatgtatattcagttatctcaggtacattactgatataatgtcttttcagaaattttgatctttcatactgtggttgtggattactgaatttgtttccttctattcaggacaatatagcagtaatatgacattactatttgggttattttcatggttgggaattttccttgctactgccggattggttatgttctataagtgtagcaggtaaacattcgattatattgtaccaatattccaaaaactggaggaaacatatagacagatccatgtcaattgtgcctctttagacagctcttttcttaagggcctttttaacaaattaatctcactttgcagaaactaatattttcttcatttgcatctagtcgttccttagaagggttttttaacatattaatctcaccttgcagaaagtaatctttctttgtttgcatgtagcctggaagtacaaggtcactttctttatttttaaagaaaactgtgatttctttgctggaacagagcaatttggctatttatcaattaataccacgttttagtgtgctgtcctgaaacattgaggatcttgttattttgcctacactctttaatgcattatgttctggccttgcacatctatataaaattgtaacatgcccaccacatactacttttatttcacattaaagatatttgattcaatcatttaaaaatttgtttgaagaatggccatactattttgttatgcagaaaagatcctggctacattgacaagaatacaagagatgcccaaaatcaaagagatgatgtaagcttgaaagatttagagagccaatgtggcttcctgttaatctgccaaatctcatgttcaattattagattgccaccttcaaaaagttgaaatactagtattagtacataatatgcaatattaattttgagtttttgtgcctctaggaacctttgttgaagaggggtctagacaaccctgaacttctggctggcaattggtctcagctatgtataacctgcaaagtgagttatttccattcaaagtgagtttctccatatatttaacttttacttaaaaacctgattcatctatatcaatagattgttaggcctgtacgctcaaaacattgctctacatgcgatcgctgtgttgagcaatttgaccatcactgcccttgggtgtctaattgcattggaaaggtactaaattcaccctcttctttgttgagttttcttatttgtagtcaaatatcttaattcagaattaggaagttgcctgtttcagccaattggcaattcatgaatagaaacctgatgtctgcagtctgcacccaagcagaggcgaaaaacaagataaaactgttcagccgctagtcaatgatttgccttttgttttgctattcccttttgattacttatggagaattgttttgtctaagattctaacctacaattatttgtgagtgcagaagaacaaatgggaattttttatgttcctgatcctagaagtttctgcaatgattattactggtgtgacggccgtcataagtatgttcacatctttctttaaaacctttacagtttgtagtatggaagatttcttaatctttatcccttttcctttgcaggagtagtaggagacccagattctcctgcatcatttggtggatggcttaattattcagccactaaccatccttgggtggtgtcttttgttgtgatggatctctttcttttctttggcgttataactctaactgtagttcaagcatcacaggtatgaaccaagttggtatttgcctcccttttacctgtcattatactatttgaggtctgacacccagattgaatcagtatgtacacaacccatatatgtaactttgtaacttaataacccatatatatacttgcctttagcttgctgttgcattgctcttttggcagtgcatggatgaattattcaatgaaaaccattactcatcaaaagcagtatttggtcatttccattcacactgatgtataattcccttatcatttacatttgcaatctctgatcaaaatccacctaatgacaccatgcttccattttttgttttactcatttctatgtcaatatatttgggtgtgaactgccagccaacctgcatttcttttgtctagtatatgacttcaacacaaatccaatgtgttaacggccctgttaatatgtacacacacttttagagatcgctcttgctacttgtggcatgattcttcatgcaatcattggtcctatctattatattcttaaaacagacttgaaaggagctaccacgttcattgtggatgctagaaattcccacattaatcggagaaaaagaaaagaagagttcgagtagaaatacatttagaaataagtgaaataaaaaattattgaaagaagagtccatgtagaacacaactagagttcgaaatttttaaaaaataaaaaaataaataacgaaattagaaaaataaaaaataagagttcaagtaagaatacaatttacaaacaaccgaaattggtaataaaaaaaaatattgaaagaatagtccatgtagaacacaatacgagattaactaaaatttgaaataaaaataaaataaattccgaaattaggaaaaaaaaaataagagttcagataggaatacaatttataaataaccaaaatcggattaaaaaataaagactatcgaaagaagagactatctagaacacaacacgagattaattaaaatccagaataaaaaataaaatcagtagtaatacaatttataaacaacaaaatatcaggacggaaaatatggaagtttgtttagaaatagtccatctagaacacaacgataacaaatggcgataaaaaggggagaaacaacaggcccgtaaaggagtagggtggtggctgtttatgggacatctaaaaactataaacaaaaccccaaatagaatcccaatgacgattaagaggagggacgacgggtaggccgttaagcagcatggccatgacggttagcgggacttctagaaagtaaaaaataaaccccaatgttaatcatgctcgttttttaaaatctcaatgataataaagaggggaggctgcaagcgggtcgtagagaagtataatggcggagccgctgacggtttggcgggacttctagaaagtaaaaaaaatgaaccccaacgacaattatgttttgttttttaaatcccaatgatgaagtgaggaggcagcgggcgggccgtagaggagtacaatagcggcgtttgacagggcttctaaaagttgtaaaatgaaagccaatgagacaatgaactctaaaactacaatgtccaatttttaaagattccaagaaggatgagtagaagtcatagtagatcaagcaaacaaataaatgggtgacaaaggagtaaggggtagcgattggcgtgacttaaaaactacaaaattagaaactcggagatgataaggcaatgagatagctatttaacaaaattttaagtaaaatcatatgtaaaaatagataattttgtatgagtgccattgagctagttgtgtttataatagaaaatgattgggcttctgtttgtcccattgagctatactgcaaatgtttttttctcagtccttgcaattatcattccctgcttatatttgggctctatttttaaattacattgtcaatcatttatttcttcttatcccttgcagatatccaggaatttaacaacaaatgagatggcaaatgccatgaggtatagttatctcagaggcccaggtggccgattcagaaatccatttgaccatggggtgcgtaaaaactgttctgacttcttgctgaaagggtacaatgaggatattgagagggtagaacagacattacaacctgatgaggaattgggaatgattcaaatgacaagaagtgcagtctcacagaatggcgagagcatgtcacttcatgctaatggcacagaccatggttgtgctgatccacaagggaactcaaaatcccatcgtcactcgcacggttcatcacaatgttgcagtcacagtaagagacctgacaagacccccttggggctaggattgggccttggtcgtaacaacccatctagccgctacacacgttcacttccttccattcattcggagagtagtgcttatttgcccttgtgattcttttggagaaggcgagctagatcgtatttcaacttgtaggtgtttattgcacaaccacagctttcttttggctatttcttcctgcagtatttgtcgcttggatctggtctcatcgacattgccagggtgtggtatatttggaggcccaatcaaccgactactgaaattgagaatatgaaggagatgcaagttttatgaaggcttcatgaacatccttagcctctcaggaacaccagcgaatgtctgtctaggcgtagcaatattttttgtgcaaaagtgcatctttgtacaatgtctcaacattttgtatgtacaagagggttagctgtccagatactatgatgttttcaagtacagctgtatattggaagaactgtaaatttatatagcgaaaccaaatgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0184000, RefSeq:Os02g0184000