Difference between revisions of "Os02g0208900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0208900| Description = Similar to ZIGA2 protein (Fragment)| Version = NM_001052797.1 GI:115444964 GeneID:4328692| Length = 8618 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0208900|
 
GeneName = Os02g0208900|

Revision as of 19:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0208900

Description

Similar to ZIGA2 protein (Fragment)

Version

NM_001052797.1 GI:115444964 GeneID:4328692

Length

8618 bp

Definition

Oryza sativa Japonica Group Os02g0208900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6139092..6147709

Sequence Coding Region

6139452..6139550,6141837..6141898,6142044..6142131,6142215..6142276,6142363..6142456
,6142573..6143127,6143279..6143770,6143867..6144037,6145613..6145717
,6145803..6145952,6146272..6146398,6146485..6146548,6147047..6147164

Expression

GEO Profiles:Os02g0208900

Genome Context

<gbrowseImage1> name=NC_008395:6139092..6147709 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6139092..6147709 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgctcaagctgcccgccaacaagaggtgcatcaactgcaacaatttgggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagcacaccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaagaaggaggaaatgagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgacagcagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggatgataaggatgagtatagtgaaaacaggagatctgatggaaattggggtggttcaagaagtccgccatacaatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccagatattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccgctactttgaagttgatgatagaaatcgtgaggatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaaccacagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctagccctgttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgagcctcctaagccaaatgtagcgagaacgattgatcctccgagaccaatcgatcctccaagaccgattgatcctccaagaccgattgatcctccaaggccaattgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcagaggacatcaactgccagcagtattggttcttcagaggggacctccgaacagataaaagtggcaagtacgataagtttaattgatttcagtgctgatcctgagccttctgcatctgtgccacctccacaatctacacctacatcacaacagcagcctgctagtgcacagccagtgcaacctgttaatgcaccagcacaacagcctgctgtggaacaagggaaaaatgtgtcatcagtgagcagtggtggtggtgactgggcatcgtttgattctttcggccagcaacaaacaccacaaactggcaatagtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgcacccaattcatcagcttttccagcttcggtcatgcccacttcagttccaaatgatggagggtcatccatgatggggcagtcacattcttcattttttggtgcaccccctggagtctcaggtcaccaggcctcaacaggaatgtctatccatggatcttcagttcaacaaactggtctagctgctccggcagctggacttccgttccaggtctctgcgaattcccgagcaactagtggcattcaagaagcagcacctaatactgacagtagatccattggccggaaagaacttccagcggatatctttacttcgttatatccaccaggacctcaaacaatagggggttggcagagaacaccccaatttggaatgggatatgccatgccatatcagactgcaatgggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtatatccgcaacagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgagccagctccagttcaagctcacacgcagcagcccctacctggaccactgggagcatctgctggcatgactcccccaggtttacttggtacctcgagttttggagtccttccacagcaacctcagcagctgtaccagtcacctgcacctccaaatcattacatgatgcagcaagttccaaacatgtctgagcagttacctaataccatgcttccaatgcaacaaggaggtttgggttccctcaacatgggctttgatcaacaagctgctcccaggtacccccagccaagcaccccaccttcctatggctctgttgggggaaatccttttgggtaa</cdnaseq>

Protein Sequence

<aaseq>MASRLKEDERNERIIRGLLKLPANKRCINCNNLGPQYVCTNFWT FICTNCSGAHREFTHRAKSVSMAKFTAQEVSALQEGGNERAREIFFKEWDAHRNSFPD SSNADKLRNFIKHVYVERRYTGERSADRPPRGKDDKDEYSENRRSDGNWGGSRSPPYN ESYSDRRSYSGRSDDRNSRYSYGERSPGYEHNDYKKSPRYFEVDDRNREDRSGKTTPV QRFEDRRPSEPQRPDNGSPNYQKETDGSSPVVRPVRDILGDNAPQLRVGEPPKPNVAR TIDPPRPIDPPRPIDPPRPIDPPRPIDPPRPNGTRTIEPPPQMQRTSTASSIGSSEGT SEQIKVASTISLIDFSADPEPSASVPPPQSTPTSQQQPASAQPVQPVNAPAQQPAVEQ GKNVSSVSSGGGDWASFDSFGQQQTPQTGNSVDPLESALAQLSFSETPSAPNSSAFPA SVMPTSVPNDGGSSMMGQSHSSFFGAPPGVSGHQASTGMSIHGSSVQQTGLAAPAAGL PFQVSANSRATSGIQEAAPNTDSRSIGRKELPADIFTSLYPPGPQTIGGWQRTPQFGM GYAMPYQTAMGMQAYPQMAFAQPAYQQPVYPQQQHAYPQPAKASNPFDLGNEPAPVQA HTQQPLPGPLGASAGMTPPGLLGTSSFGVLPQQPQQLYQSPAPPNHYMMQQVPNMSEQ LPNTMLPMQQGGLGSLNMGFDQQAAPRYPQPSTPPSYGSVGGNPFG</aaseq>

Gene Sequence

<dnaseqindica>361..459#2746..2807#2953..3040#3124..3185#3272..3365#3482..4036#4188..4679#4776..4946#6522..6626#6712..6861#7181..7307#7394..7457#7956..8073#gagaaaaaaaggtttaattaaaagttttttttttcagttttattattattacttacttacacgcgcagcgaagcagccagcgaacgaaagaggcgaagccttcgcgtcgccgctcgccgccacctcgtcttccgctgcgagatctcgcgcgagcgccgccatcggaggaggaggcgcgtcggcaggtgagtgctcgccgattttggcggtggctttgctctaattgtgggcggatctggctgggttggtcggatctcgagccatttcggtgggggatatttttgtttgatttttttttttgcggcggtggggttttagggtttgtggcggcggcagcggcggccggggatccgggcggcgatggcgagcaggctcaaggaggacgagaggaacgagcggatcatacgcgggctgctcaagctgcccgccaacaagaggtgcatcaactgcaacaatttggtgagttcccgctggctttctactgttcgcttgctaaatgtggtaggatttcggcggggttggctaggatctaggggaagtggtttttgagctcgcttggctttatacttcagcgttgctagtaatggcgagggttttagagctacccgcgaatgtttgcggcatactaggagatctcattggctggctggataggtaggtttccgatcggatagcggtattttattaggctggttgatactggatcacaattcagtaaattgggacggagagtaatgcgtggagctattgctggatgtaatgccatgccctgtaatcacacagcatattctttttcatgtaattaattatgtagacgacaaatgttgctactttctgccagatatacatcacgcgttacgacttaggactagaacaatggccaagaggtacctaagatacaagtatcaagaaagtaatggcgcttatgagctgctaaagtattcttatctttgcggaaaaacggattatgagcgtctcaaagttatcatgttcatatctttgcagtcaaagtcaatggtgaatgtcacacttgcttacattgtctgtggtgtgacaaaacaaagcagcccttcaaaaagcagcacaagcagaaaataaaataaaaagaacacctctttataattgaattacaacatgtggaattttaataaatccctagtcgaaaaacagctttgacatatactctttgctattatagttgatgaagaattgaagatcataagcaaaaaaaattagaaaccactatggtcgtcttggaccaaaacgtgtattttgtgacattctggcacttgcaaggcagtacatgctactccctccttcccaaattgatcatcatgtaatggaattcaaaatttctcaaattgatcatcatataaccgcatggacacggatttcatcataatacaattaatgcagcatgggagaatgtgtgcatgctaaggtgtaattggcatggtgttttgatcgatgcatgcattgtgggagaatgcgtgcatggtgtcttgattgatgtgatttaaattatccttggtcttggtgcataaacatatatgatgatcattttgggaaggagggagtaatattctactatataccaagattgttaactctccagatgatgtctaaaaattcacgtgttgtttcaaccacctgaatagcttagttgaccttgcgttcatggatgtttaatattttttcccttctgtttatgccctaaactctgtcgtgctaatacatgcacatttgcacgctgcactttaggctctatgcatttctttaagcttgattttttccttttctttttctgctagcatagtatctgctatttaaggcaaatagcattcttgacttgactgatctgctagttgttttgggcattaataatttaccacagctatcaataaggaaactatattatcatggcccatttggatgtctattgttctggcagttgacttcaccttttttactcttttagagtatgccaattagtgattgcttctattattatgcaaaataaatgattttttttcttaaactgctattgcaacagtggggtcctatataattagatgccatcagttgttgcaaatgttttctactgttggaaaagcatgaatcatctgcagtccacatgacattttcactacataagccttttttggtagttcgtttattactcgatctacagcgcaatgaggttatttggaaatctccaactagtcatcacagcgagccttgcctaattttctctaccacaagtagaataaattactccctccattccaaaatatagtaactttcagctatgaatccggacaagtaaatgtctagattcatagctaaaagttgctatattttgggacggagggagtattatgctttctaattctatggtgcacccaaaataatgtcaaaatctatcatttggaacttgaagagttttgcaatatgtgtactggagggaatcggcagtagaagcagctaggtttgcctaataatgtcatgtcaagattatggaggattgcactccactcttgcaattaggtggactctaagatagttcaagcttatatttatgcccatattttgcttcagcagagtactccttgcttaggtgctccacacatgtttttgttgggaaagtagacttaattagtgggtatttgtgtaatactgatgtgcattactttgtttcctaattttttttgtatattactgaatcacatatattgatattaacagggaccacaatatgtctgtacaaatttctggaccttcatttgtaccaattgcagtggagcacagtaagattcttattcagttctgttttgttacacttgtaatatgtcgaacctctctagcttcactgtccctttggtcaaattagatgcattttagtgaagtcagtgatcctaattttattgatgacaaaatttgttttgcttctagccgagagttcacgcatcgagcgaagtcagtttctatggctaaatttactgcacaggaagttagtgcccttcaagaaggaggaaatgaggtgacttgtcctctcttttctttttcatgttttctaccattttaggcctttctaatttgacatgtgttttgcataacctgtagcgtgctagagaaatattcttcaaggaatgggatgctcaccgcaattctttccctgacagcaggttacctttctgtttagccataccatatttagattacaacttgtttcctttatcttggaattctgacctgtttcttttggtctcagtaatgcggataaattgaggaactttattaagcatgtttatgtggaacggagatacacaggagaaagaagtgcagatcggccaccgaggggaaaggtgatatgttggctaattataactatccttgtttttttgcagttgccattgcttgttggaaattgctattatactatcctaaattcgttatttccttatttctttgtatcttctaggatgataaggatgagtatagtgaaaacaggagatctgatggaaattggggtggttcaagaagtccgccatacaatgaaagctattctgatcgtcgcagttatagtggaaggagcgatgacagaaattccagatattcctatggagaacgaagtcctggctatgaacataatgattataagaaaagcccccgctactttgaagttgatgatagaaatcgtgaggatagatctggaaaaacaactccagttcaacggtttgaggaccgcaggccttctgaaccacagaggccagataatgggtctccaaattaccagaaggaaaccgatggatctagccctgttgtacggccagtgagggatatactgggtgataatgcacctcaactacgggttggtgagcctcctaagccaaatgtagcgagaacgattgatcctccgagaccaatcgatcctccaagaccgattgatcctccaagaccgattgatcctccaaggccaattgatcctccaagaccaaatggaaccagaaccatcgaacctccaccacagatgcaggttattattttcctctgatgtttcctttttttttttgcagacattgcttttagaaatatcaccatgttcttgtctccatttccacgttaagctgataattttatcagtaggttcaattcattagcttacaatacatacttcataattgtagaggacatcaactgccagcagtattggttcttcagaggggacctccgaacagataaaagtggcaagtacgataagtttaattgatttcagtgctgatcctgagccttctgcatctgtgccacctccacaatctacacctacatcacaacagcagcctgctagtgcacagccagtgcaacctgttaatgcaccagcacaacagcctgctgtggaacaagggaaaaatgtgtcatcagtgagcagtggtggtggtgactgggcatcgtttgattctttcggccagcaacaaacaccacaaactggcaatagtgtagatccccttgagtctgcacttgctcaactatcattttctgaaacaccctctgcacccaattcatcagcttttccagcttcggtcatgcccacttcagttccaaatgatggagggtcatccatgatggggcagtcacattcttcattttttggtgcaccccctggagtctcaggtcaccaggtacttccgtttgcagaggaatatcagaagtcgatctgtgtaccttccatttctttttttgccttgaaataggttttcacttgatacttttcttaggcctcaacaggaatgtctatccatggatcttcagttcaacaaactggtctagctgctccggcagctggacttccgttccaggtctctgcgaattcccgagcaactagtggcattcaagaagcagcacctaatactgacagtagatccattggccggaaagaacttccagcggtatgtgattaactgcttgtagagaattgaacatctagcattgcagcattttctagtccctgcactactgacttgtttcatcttccccacccctttgcttcattggcttcatttagatatgtaatccgttaatttgtatgttctacagtatagcttgtgcaatatgcgatgccattttctaaacttattgtaaccatattttgtgaatcataaagctgaaattaccaaatttgtggacagggcatagaaccaactacttaccagattagtagcacaaccgttttctctttgacgctttagaatccatgttgtaagttgcagaggaactgcattattttatacctataatatataggatagcagtatgaggcactttgttgttgcctaggcttccaagtcgatacctgttggtgtattacctataatatataggacagcaatatgctttgaggttcaggacttatgatatggttatcctcccatgaactaatttcatgacatataatcactgcagtccaactaaattgagtactagtcaatatgagttcttagttcggatttcacttaccatatgcatatggggtacatttcatacccaagctccaaaattcttgttgagcatatacatgtattggattatagatgtgtccctagatattcaggtgcctttaataatttacataaagttacaaaagttatttgcagtgtcgtgctgaaattttatggagttaaaaagtgtcagataaaaaaagaacaggagtacatgataaaaggtatagagctcaaaactgctaagagactgacacttacagtttttctatggctagtatttccttgaaatcttgtcaaataatgtaaggtgtggtggcccaaggttaaatgatgatcttttgatctgtcagaggtggtatttctgtttagcaagcattagctaactgttaatacgttggtaggatatatcatttcctatgcgatcagttatgttggtttaaaactaggtgagatttgttgattgtttacatattaaattgcattttaatgggggttacatggttattaacttttttttattgagagatgataatatatgcatgtaaaacaatgcatggtatggtagggcaagagttgaataatggtgttaataattgttggtgcatttgaatgtgatatctgggttgactaaccagatacatggaaataaatcaggttatcgagtgaaaaagctaaacaggcattcaggtcatcattatgcaaaaaaaggaaaaaaagaaaaaaaatatatagctattggtttgagtctatacttccagtaagtaataagtagtgatctgagtcgcccattcatgctggttgtgaccaacaatgcttctcagttcatttgtcttttcgttgtacccctatttcacttgcaagatcgtttaaactaactttgaattgaggacaactgtgcgatccttttccttttctgtgaaaaatggtcatattagagaagaaaaaaaaacctggtggggccactaatatgctccataaaatcattgtgtcagcatagttgacccttagatcatttttttgcaggatatctttacttcgttatatccaccaggacctcaaacaatagggggttggcagagaacaccccaatttggaatgggatatgccatgccatatcagactgcaatggtatctatcattctcatattagcgatttattgtgtatctgatgttgatgtttttcctaactagataaattatttaccaattttagggaatgcaagcatatcctcagatggcatttgctcaacctgcatatcaacaacctgtatatccgcaacagcaacatgcatacccccaacctgcgaaagcatcaaatccttttgatcttgggaatgagccagctccagttcaagctcacacggtatgaatgaagagaatgaaatacctcttttacaaaatatctcaaactaagatcgtttcacttactattcttgtaaatcttgaggtatcttgtctattaattatgcctgattgtttcattaacattgtgatattcgtgtaaatgttggtcctcttcctctaaaaaactgtcaagtgcattagttttatacttgatgatgcactacgatagtgcgaccatattgtttgtacccttgagcaatcccgacctggatcagctggtatgactcaccatctttgtttgctccattaacatggttaatctttgtgtccttgagcagcagcagcccctacctggaccactgggagcatctgctggcatgactcccccaggtttacttggtacctcgagttttggagtccttccacagcaacctcagcagctgtaccagtcacctgcacctccaagtatttccatatctcagcataatctctgaaattgtgctctttattagtatttcttatctgtgtgctaatttgtggttcaacttcagatcattacatgatgcagcaagttccaaacatgtctgagcagttacctaataccatgcttccaatgtgagttgactgctgtatttagtgtatctcctaagttgaaagtgtagtgaagaactttttagcatttttttaaagatactttttgctcgtgttgattttttttttctgccatttttgttgtatcttttgggatgtaggagtaggaagtagcatgcaaccttaaaatagagactaattattaatgagtccattcgaccagattggatggttgacatcaaccactgaaacccgtagctttcagaattatctcacctttgctctactataaacaatagcatccaccttctagtggcatgcccattgtttgtgtcattaaaatctggtactgcaaccaaaggcaccagcctttgcgttggttccgttgtgttatatcattctttcattttaagttttagttcctacaagacgtatttccgtcctaaaatacttccaaggtgttggttccattgtgcaattttttgttgtttcgacgcttatgtccaagttgtggcattacaggcaacaaggaggtttgggttccctcaacatgggctttgatcaacaagctgctcccaggtacccccagccaagcaccccaccttcctatggctctgttgggggaaatccttttgggtaaggtcattatacaatcgacgtgcgatattatctgctcttttggagttcttgtgcatcatcggacaaagggtttgcagtgcccagcgggatcaggaaccatactagccctcgagagaatttgttaattcatactactggttgtgtatttatccgctgtagttggttgtacaactcgtttccacaaggacaatggtcgagcgtaactgcgtctgagcataagctccacccttcggagttcttgatgcgcattccaatagtgtttgtatatttgtgtttgatgcggttgcaacatgtatatttgggaaggatgaggcctcggggcctcgaatggttttttgactttcttttcggattctccatggaccatgtgcaaatcatgtattcttattggcccaggttgtttatttacccccagtgcagttggctattaaaatttatgtggatggtaataccggattatggttgatatgtataattgtgtaaggtccatttttggaatgttgtatgatactcaggacaaaacgaaacttctaagttgttttcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0208900, RefSeq:Os02g0208900