Difference between revisions of "Os02g0219200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0219200| Description = Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta- galactosidase) (Exo-(1-->4)-beta-D-galacta...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0219200|
 
GeneName = Os02g0219200|

Revision as of 19:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0219200

Description

Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta- galactosidase) (Exo-(1-->4)-beta-D-galactanase)

Version

NM_001052845.1 GI:115445060 GeneID:4328745

Length

3123 bp

Definition

Oryza sativa Japonica Group Os02g0219200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6685266..6688388

Sequence Coding Region

6685393..6685501,6685957..6686159,6686282..6686494,6686583..6686692,6686778..6686881
,6686976..6687145,6687237..6687401,6687484..6687602,6687753..6687840
,6687935..6688040,6688135..6688223,6688361..6688387

Expression

GEO Profiles:Os02g0219200

Genome Context

<gbrowseImage1> name=NC_008395:6685266..6688388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6685266..6688388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagcaggacgacgcccctgacccagtgatcaacacttgcaatggattttactgcgactacttcagcccaaacaagaattacaagccgtccatgtggactgaggcctggaccggctggtttacatcgttcggaggtggggtgccgcatcggccagtggaggatctggcttttgccgtggcgaggttcatacagaagggtggctctttcgtgaactattacatgtaccatggaggaaccaattttggccggacagctggtggtcccttcattgcaaccagctatgattatgatgctccgattgacgaatttggtctgcttaggcaaccgaaatggggtcacttgagagaccttcacagggccatcaagcaggctgagcctgtgctggtttctgccgatccgacaatagagtctattggcagctatgagaaggcatatgtcttcaaggcaaagaatggagcatgcgcggcgttcctgtcgaactaccacatgaacactgcagtcaaagtcaggttcaatgggcagcagtacaaccttcctgcttggtccatcagcattctgccggactgcaaaactgccgtcttcaacactgcaacggtgaaggagccaacattgatgccaaagatgaacccagtggttcgattcgcttggcagtcatatagcgaggacacaaactcgctgagcgacagcgcgttcacgaaggatggccttgttgagcagctgagcatgacatgggacaagtcagactacctgtggtacaccacatacgtcaacattggtacaaatgacttgaggtctggtcagtctcctcagctcactgtctactccgctgggcactcgatgcaggtgttcgtgaacgggaaatcatatggatctgtttatggtggttacgacaacccgaagctgacatacaatggacgtgtcaagatgtggcagggcagcaacaagatctccatcctaagttcagcagttggcctccctaatgttggcaaccattttgagaactggaatgtcggagtgctcggaccggtgaccctctccagcctaaatgggggcacaaaagacctcagccatcagaaatggacctatcaggtcggcctgaaaggcgaaacgctgggtctccacaccgtcaccggaagctccgcagtcgaatggggtggccctggcggctaccagccactgacttggcacaaggctttcttcaacgcgccggccgggaacgacccagtggcgctcgacatgggcagcatggggaagggccagctctgggtgaacggccaccacgtcggccggtactggtcgtacaaggcctccggtggctgcggcggctgcagctacgccgggacgtaccacgaggacaagtgccggtccaactgcggcgacctgtcccaaagatggtaccatgtgccgagatcatggctgaagccgggcggcaacctgctggtggtgctggaggagtacggcggcgacctcgccggcgtcagcctggcgacgagaaccacatga</cdnaseq>

Protein Sequence

<aaseq>KQDDAPDPVINTCNGFYCDYFSPNKNYKPSMWTEAWTGWFTSFG GGVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDE FGLLRQPKWGHLRDLHRAIKQAEPVLVSADPTIESIGSYEKAYVFKAKNGACAAFLSN YHMNTAVKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVVRFAWQS YSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTNDLRSGQSPQLTVYSA GHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILSSAVGLPNVGNHFEN WNVGVLGPVTLSSLNGGTKDLSHQKWTYQVGLKGETLGLHTVTGSSAVEWGGPGGYQP LTWHKAFFNAPAGNDPVALDMGSMGKGQLWVNGHHVGRYWSYKASGGCGGCSYAGTYH EDKCRSNCGDLSQRWYHVPRSWLKPGGNLLVVLEEYGGDLAGVSLATRTT</aaseq>

Gene Sequence

<dnaseqindica>2888..2996#2230..2432#1895..2107#1697..1806#1508..1611#1244..1413#988..1152#787..905#549..636#349..454#166..254#2..28#caagcaggacgacgcccctgacccagtggtacactgataattgatagtagaaactggaaacaaactactccaccttccttggtggtgtcaaatgaatgagtttgttgtgcagttcactgtgccagactgcgagttcttacccttttttatccccaaccatggcagatcaacacttgcaatggattttactgcgactacttcagcccaaacaagaattacaagccgtccatgtggactgaggcctggaccggctggtaattttcttgttccaactcatgtcgcacttcataccatcctaatctgatgggaatgatcttactacggttttacattttactgcgcgtgaaggtttacatcgttcggaggtggggtgccgcatcggccagtggaggatctggcttttgccgtggcgaggttcatacagaagggtggctctttcgtgaactattacatggtgagaagagagggggctcactggtcacaccaacactggtgttgcagtgaatgtagttttacttgttctgaccgcatttcatgttctggtgcagtaccatggaggaaccaattttggccggacagctggtggtcccttcattgcaaccagctatgattatgatgctccgattgacgaatttggtatgcagtgattgccttctttgataaacttgaattcctgcctgccttcttgagatattttcggaaatttgctgttttttatcttctgtttataatcttgattgacatggatctgactcagttgataaacggatggcatgtacatctcaggtctgcttaggcaaccgaaatggggtcacttgagagaccttcacagggccatcaagcaggctgagcctgtgctggtttctgccgatccgacaatagagtctattggcagctatgagaaggttggtgttgctacaatcttgcacacaatatatgtgatcatccatagatattcctagattcataattggtcaaatcctttaggcatatgtcttcaaggcaaagaatggagcatgcgcggcgttcctgtcgaactaccacatgaacactgcagtcaaagtcaggttcaatgggcagcagtacaaccttcctgcttggtccatcagcattctgccggactgcaaaactgccgtcttcaacactgcaacggttagggaacactgaagcttgaacctttatgtggactagctggaccttgctggagcacatggtctaatgtacttacatgataatggcacaggtgaaggagccaacattgatgccaaagatgaacccagtggttcgattcgcttggcagtcatatagcgaggacacaaactcgctgagcgacagcgcgttcacgaaggatggccttgttgagcagctgagcatgacatgggacaagtcagactacctgtggtacaccacatagtgagtgaccaaccttgatatgtgacaaaatttcaaccatttctattagaagccatatgaattttcccttaaccctgatgaattcttgttgcagcgtcaacattggtacaaatgacttgaggtctggtcagtctcctcagctcactgtctactccgctgggcactcgatgcaggtgttcgtgaacgggaaatcatatggtactggcacttagctacatttcatgttagatcaagccaacaccaatcattttagtgaatgttcatgattttgcttcctccgtaggatctgtttatggtggttacgacaacccgaagctgacatacaatggacgtgtcaagatgtggcagggcagcaacaagatctccatcctaagttcagcagttggcctccctgtgagttgatcacagcttaactgatatcccggacacttatatcttgtctcaaactacctgtaacactgatatctgataccattttcagaatgttggcaaccattttgagaactggaatgtcggagtgctcggaccggtgaccctctccagcctaaatgggggcacaaaagacctcagccatcagaaatggacctatcaggtcggcctgaaaggcgaaacgctgggtctccacaccgtcaccggaagctccgcagtcgaatggggtggccctggcggctaccagccactgacttggcacaaggtaagtgctgaattctgaagaagcaccagcaatgacaaagtggaattacagtttcatcacgctcagactgaatttgtgtcacctgttgctgaatttccttttgtcaccattgattgtctcaggctttcttcaacgcgccggccgggaacgacccagtggcgctcgacatgggcagcatggggaagggccagctctgggtgaacggccaccacgtcggccggtactggtcgtacaaggcctccggtggctgcggcggctgcagctacgccgggacgtaccacgaggacaagtgccggtccaactgcggcgacctgtcccaaagatggtaataaattcagcctcacataaccatcttctcacacaactcaaattttctctgaacaataatttttagataatggaagttttatcgaggctcggtcaattacatcaagataatataatccaactgagtctgcccttagcttttgcataaaatgcacaaaaccaaaaaagaaccacaaaaaaccacatcccaagcacacaagtagagcagaaacacaaagattagtgactatcaatccatgctcaacaataataaaatgttttacaatgtttaaataacaaaaagaaagagacgtttataatagtgtctctgctactgtagtagaatcaattttaccactactcaattactattagtagaacgattttttttgcctcataaattaacgcttaagatcacttctattggggagagatcaccgtaaaatgtacctactattttggataaaatttcaggtaccatgtgccgagatcatggctgaagccgggcggcaacctgctggtggtgctggaggagtacggcggcgacctcgccggcgtcagcctggcgacgagaaccacatgaacgaattgcagcgagagatcatcaccaccatttgatacagtcgtcgacggccgcgtgaacagcttcctcctgtagcacgcagaattcgtcgatggtatttacacacacagacgaacaccttacaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0219200, RefSeq:Os02g0219200