Difference between revisions of "Os02g0288733"

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(Created page with "{{JaponicaGene| GeneName = Os02g0288733| Description = ABC transporter, transmembrane region domain containing protein| Version = NM_001185974.1 GI:297721080 GeneID:9272039...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0288733|
 
GeneName = Os02g0288733|

Revision as of 19:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0288733

Description

ABC transporter, transmembrane region domain containing protein

Version

NM_001185974.1 GI:297721080 GeneID:9272039

Length

6406 bp

Definition

Oryza sativa Japonica Group Os02g0288733, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10937429..10943834

Sequence Coding Region

10937429..10937529,10937614..10937853,10937935..10937998,10938316..10938621,10939247..10939461
,10939556..10939850,10940375..10940497,10941012..10941080,10941333..10941419
,10941853..10943604,10943799..10943834

Expression

GEO Profiles:Os02g0288733

Genome Context

<gbrowseImage1> name=NC_008395:10937429..10943834 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10937429..10943834 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaactccgtggtatcgtgcggattcatccggatgagttcatggatcagccacttttggaccgtgcagcttcttcctcgtctaaggccacaagcagtagatcagctttcacagatgctggattctttagtattatcactttttcttggatggggccgttacttgatcttggaaggaggaaagcactagatcttgatgatgtgccaactttggatgataatgacagtgttcaaggcatcctccctaactttgaggcgaagctcgtctcagtttctggttcagggaagtacaccgatgttacaacaattaacttggtcaaagctcttgttcttacaacctggaaattaatcctcttcactgcagtttgtgccttactccgtactgtctcttcatatgttggtccatacctgattgagtactttgttgactacctgaatcgaagtccacagtccgctaaagaaggctacattttggtgttgagttttgttgttgcgcagttcatcgaaggcctctcatcaaggcatttgctcttcagatcgcaacaacttggtgtgcgggtacgctcagctcttgtcgccgtcatttaccaaaagggcctctccctctcaaatcagtccagagaaagcagttcaagtggagagatcatcaatgccgtgagccttgacgccgagcgtgtcgcggatttcaattggtccatacatgagctttggctgtttcctgtgcagattattctagcaatgctgatcctatactccactcttggtttggcagcatttgcagcccttgctgccactgttttgacaatgttagcaaatctacctatagggaggatccagcaaaattaccaagagaaaatgatggatgccaaggatgctagaatgagggctatgtctgagatgctgcggaacatgcgcattctcaagcttcaaggatgggaaatggtcttgtcgaagatcatggagttgaggaaggaggagatgcattggctaaagaaagatgtatacacctcagttatgcttatatctgtcttctttggagctcctgcttttgttgctatggtcacctttggaagttgtttgcttctaggcattccattagaaacagggaaagtattgtctgctctggcaacgtttaggcagctacaaggaccaatcaatagtatcccagacacagtctctgtgatcatccagacaaaagtatcacttgacaggatatgctcttttatgcacctcgaggaactatcgagcgatgttgtaactaaacttctaagaggtacaactgatgtatcgattgaggtgaggaacggtcagttctcttggaacacaccttctgaggttcctactctccgaaacttgaacttccgtattcgacaaggaatgagggttgctatctgtggaactgttggatctggaaaatcaagtttgttgtcatgcatactcggtgagataccaaggttatcaggagatgttcaaacatgtggtaggattgcctatgttagccaatcgccatggatacagagtgggacaattgaacataacatactttttgacacaaaactgcatagggaaaggtatgaaaaggtccttgaagcatgctgtcttaaaaaggacatggaaatattaccattaggtgatcagacaattataggagagagaggcattaacctaagtggcggacaaaagcaaaggatgcaaattgcacgtgctttgtatcaagatgcagatatctttctgtttgatgatcccttcagtgcggttgatgctcatactgggttgcacttgttcaaggagtgcttgcttggactcttagcttcaaaaactgtagtgtatgttacccaccatgtcgaatttttgccatcagccaatgctatcatgtggaagtacgcttttcagataagcaaaaggatgataatcaaggagcagaagaagggattgttcaaaatggcttctagtgatcaaagcacagtggacaccagaatttttgacctgatgggatatgttctatttcctgctatcgaacttcttggaacaattattttaatgtcacgggtagcatggccagtcttccaatattacatagatggtgctagagagttgcagaggttgactggagtttgcagagctcctgtgatgcagcattttgctgaatcagtagctggatcaaatatcattagatgctttggcaaggaaatacagtttatcaatgccgtcagtcatttcatggataatttatctagaccaagtttatataatgctgcttcaatggaatggttgtgctttcgcttggacattctttcatcctttatcttcgcatttgccttgatacttctggtcaccttgccagctgctctaattgacccaaagacagctggtcttgcagtcacttatggattgagtctgaatatgttacaagggtgggctattgcagtgctctgtagtttggaaaatagaatgatatccgttgaaagaatttttcaatacatggctattccttctgaaccaccccttacaatatcaaaaagtagaccaaactgccggtggccgacaaatggtgaaattgagcttcgcaacctccatgtaaggtatgcgacacagttgccttttgttttgaaaggcctaacttgcactttacccagaggattgaggaccggtatcgtcggaagaactggcaatggcaagtcaaccttgattcaagcactattccgcatcgtcgacccatgtattgggcaagtgttgatagatggccttgacatttgcaccattggactacatgatctacggacaagattgagcatcattcctcaagatcctgtgatgtttgaggggaccctacgaaataacattgaccctttggaggagtacagcgatgagcaaatctgggaggcattggactcttgtcatcttggtgatgaagttagaaagagtgatctcaagcttgactctacagttacagaaaatggcagcaactggagtgcaggtcagcgtcagcttgtttgtttgggaagggtggttctaaagaagcgaaagatcttggttttggatgaagcaacttcttcagtggatccaataactgacaatttgattcagaaaaccctgaagcaacaattctccgaatgcacggtgattaccatagcacatcggatcacatcagttcttgatagtgagaaggtcattcttatggacaatggtaaaatcgcagaggctgactcgccagcaaaacttctggaagacaatttatcgttattttcgaaacttgtatcagaatacaccaagggatcagagtattaa</cdnaseq>

Protein Sequence

<aaseq>MELRGIVRIHPDEFMDQPLLDRAASSSSKATSSRSAFTDAGFFS IITFSWMGPLLDLGRRKALDLDDVPTLDDNDSVQGILPNFEAKLVSVSGSGKYTDVTT INLVKALVLTTWKLILFTAVCALLRTVSSYVGPYLIEYFVDYLNRSPQSAKEGYILVL SFVVAQFIEGLSSRHLLFRSQQLGVRVRSALVAVIYQKGLSLSNQSRESSSSGEIINA VSLDAERVADFNWSIHELWLFPVQIILAMLILYSTLGLAAFAALAATVLTMLANLPIG RIQQNYQEKMMDAKDARMRAMSEMLRNMRILKLQGWEMVLSKIMELRKEEMHWLKKDV YTSVMLISVFFGAPAFVAMVTFGSCLLLGIPLETGKVLSALATFRQLQGPINSIPDTV SVIIQTKVSLDRICSFMHLEELSSDVVTKLLRGTTDVSIEVRNGQFSWNTPSEVPTLR NLNFRIRQGMRVAICGTVGSGKSSLLSCILGEIPRLSGDVQTCGRIAYVSQSPWIQSG TIEHNILFDTKLHRERYEKVLEACCLKKDMEILPLGDQTIIGERGINLSGGQKQRMQI ARALYQDADIFLFDDPFSAVDAHTGLHLFKECLLGLLASKTVVYVTHHVEFLPSANAI MWKYAFQISKRMIIKEQKKGLFKMASSDQSTVDTRIFDLMGYVLFPAIELLGTIILMS RVAWPVFQYYIDGARELQRLTGVCRAPVMQHFAESVAGSNIIRCFGKEIQFINAVSHF MDNLSRPSLYNAASMEWLCFRLDILSSFIFAFALILLVTLPAALIDPKTAGLAVTYGL SLNMLQGWAIAVLCSLENRMISVERIFQYMAIPSEPPLTISKSRPNCRWPTNGEIELR NLHVRYATQLPFVLKGLTCTLPRGLRTGIVGRTGNGKSTLIQALFRIVDPCIGQVLID GLDICTIGLHDLRTRLSIIPQDPVMFEGTLRNNIDPLEEYSDEQIWEALDSCHLGDEV RKSDLKLDSTVTENGSNWSAGQRQLVCLGRVVLKKRKILVLDEATSSVDPITDNLIQK TLKQQFSECTVITIAHRITSVLDSEKVILMDNGKIAEADSPAKLLEDNLSLFSKLVSE YTKGSEY</aaseq>

Gene Sequence

<dnaseqindica>6306..6406#5982..6221#5837..5900#5214..5519#4374..4588#3985..4279#3338..3460#2755..2823#2416..2502#231..1982#1..36#atggaactccgtggtatcgtgcggattcatccggatgtttttcatgcatgttacatatggctttagcactcacagttatgtttgtttcctttaaattagttattctttctgtaatcctattaacgtccatggacagactgaaattatctttttgactttaacacttttatatttttcttcgtcataaataatcagttgtaactttctaaagtttgttgttctatgatcaggagttcatggatcagccacttttggaccgtgcagcttcttcctcgtctaaggccacaagcagtagatcagctttcacagatgctggattctttagtattatcactttttcttggatggggccgttacttgatcttggaaggaggaaagcactagatcttgatgatgtgccaactttggatgataatgacagtgttcaaggcatcctccctaactttgaggcgaagctcgtctcagtttctggttcagggaagtacaccgatgttacaacaattaacttggtcaaagctcttgttcttacaacctggaaattaatcctcttcactgcagtttgtgccttactccgtactgtctcttcatatgttggtccatacctgattgagtactttgttgactacctgaatcgaagtccacagtccgctaaagaaggctacattttggtgttgagttttgttgttgcgcagttcatcgaaggcctctcatcaaggcatttgctcttcagatcgcaacaacttggtgtgcgggtacgctcagctcttgtcgccgtcatttaccaaaagggcctctccctctcaaatcagtccagagaaagcagttcaagtggagagatcatcaatgccgtgagccttgacgccgagcgtgtcgcggatttcaattggtccatacatgagctttggctgtttcctgtgcagattattctagcaatgctgatcctatactccactcttggtttggcagcatttgcagcccttgctgccactgttttgacaatgttagcaaatctacctatagggaggatccagcaaaattaccaagagaaaatgatggatgccaaggatgctagaatgagggctatgtctgagatgctgcggaacatgcgcattctcaagcttcaaggatgggaaatggtcttgtcgaagatcatggagttgaggaaggaggagatgcattggctaaagaaagatgtatacacctcagttatgcttatatctgtcttctttggagctcctgcttttgttgctatggtcacctttggaagttgtttgcttctaggcattccattagaaacagggaaagtattgtctgctctggcaacgtttaggcagctacaaggaccaatcaatagtatcccagacacagtctctgtgatcatccagacaaaagtatcacttgacaggatatgctcttttatgcacctcgaggaactatcgagcgatgttgtaactaaacttctaagaggtacaactgatgtatcgattgaggtgaggaacggtcagttctcttggaacacaccttctgaggttcctactctccgaaacttgaacttccgtattcgacaaggaatgagggttgctatctgtggaactgttggatctggaaaatcaagtttgttgtcatgcatactcggtgagataccaaggttatcaggagatgttcaaacatgtggtaggattgcctatgttagccaatcgccatggatacagagtgggacaattgaacataacatactttttgacacaaaactgcatagggaaaggtatgaaaaggtccttgaagcatgctgtcttaaaaaggacatggaaatattaccattaggtgatcagacaattataggagagagaggcattaacctaagtggcggacaaaagcaaaggatgcaaattgcacgtgctttgtatcaagatgcagatatctttctgtttgatgatcccttcagtgcggttgatgctcatactgggttgcacttgttcaaggtatttttcagaacaaatctttaaatcctttttctatatgtgtgtaatcatcattgaatgcttaaactaataacttattgttggtacttgagacttctaatactacaaaatatatttttacatcatatgatttcaacgacattttctcccagtcaatttagggttttttttaaccttcagttgtcagtgctagtgctgtttgaatagaacatgttggttttgttggatttttcatttcccaacttccaaaatcagtaatagcagtttatctcactgcatagtttattgtgtggacataaacctaatgtcttaatcagatcttttgtatgtttcagctaaacagtttttaggtagcttgttcttgaacaatatttagggttcaagagtatatctactgtatgaaagttattcatcacgaccttgtatttttcaggagtgcttgcttggactcttagcttcaaaaactgtagtgtatgttacccaccatgtcgaatttttgccatcagccaatgctatcatggtgagcttccaacaactatcaaatctacttatttattctactcgcaacaatcgttttaccatgtcaattcatttccctgttctaggtcatgaaagatggacaaattatacaagttgggaattacgctaaaatacttaattctggagaagagttcacaaaattagtattttcccataaggatgccatttctactctagaaagtttagaacactcaagtggcaatcccaaaagtagtcttattcctggtgacagtggaagtacgcttttcagataagcaaaaggatgataatcaaggagcagaagaagggattgttcaaaatggtcagttggtacaagaagaagagagggagaaagggcgggttgggatttccgtctattggaaatatattacaatggtatatggtggagcacttgtgccgcttattttgctcgctcagataatttttcaagttcttcaaattggaagcaatttttggatggcttgtgctgctccaatatccaaagatgtgaatcctccggtcaatagcttgaaaatggtacttgtatatgttgtgttagcttttgtgagctcgttattcatcttcataagatcccatcttcttgtcatggctggatgcaagactgcaatgatgctatttgataagatgcatcgatgcatattccgagcttcaatgtatttctttgactccactcctagcggtcgaatcttgaacagagtaagtaatttaccttcaccatctttattttaatgagaaaattgaagttatctccttggaatgccattagaatttttattcatattcaattaatcatgaaagttgaaacaaaattgcaggcttctagtgatcaaagcacagtggacaccagaatttttgacctgatgggatatgttctatttcctgctatcgaacttcttggaacaattattttaatgtcacgggtagcatggccagtcttcgtaatttttgtcccaattattgcagcatctctgtggtatcagatattctttttattatatatcttatgttcgataccaattgtggttccagtttataatttttaagtatgtagaaggaaaaatacattgattcatgactatattgacaatttttcacagattcaactgaaaattgaacatcagtgtttttcttttcacagatttaatttaaaatttaaagggatggcaaagcaattacagataatacaaaataaaatcattaagtaaatatatgatgtgatacattacttggcaaaaatattcccaatcaaattttcaggttgatcctagtgtatataggagtgtccttgtacatttccgatgttcttctgaacaatcaaattttgtcttaaaatatgctattgaacaataataattgttaccatatttcaaaactataattatgcattttctatgacattattggtttcaagacgactcatattttgtgtttgtttttaattaccacaattccttcccttcagcaatattacatagatggtgctagagagttgcagaggttgactggagtttgcagagctcctgtgatgcagcattttgctgaatcagtagctggatcaaatatcattagatgctttggcaaggaaatacagtttatcaatgccgtcagtcatttcatggataatttatctagaccaagtttatataatgctgcttcaatggaatggttgtgctttcgcttggacattctttcatcctttatcttcgcatttgccttgatacttctggtcaccttgccagctgctctaattgacccaagtaagtacggtgggctttaatttgattagtcagatcaaattagttcattattgtattaacatccgtgctaactctcatatttactacttcacagagacagctggtcttgcagtcacttatggattgagtctgaatatgttacaagggtgggctattgcagtgctctgtagtttggaaaatagaatgatatccgttgaaagaatttttcaatacatggctattccttctgaaccaccccttacaatatcaaaaagtagaccaaactgccggtggccgacaaatggtgaaattgagcttcgcaacctccatgtttgtctcttgaactctatgttgttatataagttcacttctaacaatgtcggagttatatcaattattgattagaactcccaaattttctattcgaaatattctctgagaaaaacaatatgttattaaattactcccttagggttgataatacttgtcattttagacaagagcacggtttccaaaaaaacaactttgaccattatttttcattataatatgtataaaagtgttaataaatatatgattttattaaagtactttgtaagactaatctatacatgtaatcaccatatttgaaagacaaatattttaaaaatgattcataatcaaagattctatacctcacccttgtctaaaacgacaagtattatcagcccggagggagtaatttatttcttcatgaagttattccataaaaattggcatgcaggtcttttttctagtagtgtagagttgcaatcctctttcataatatactattttgtatgacttcaacataccgctgtagaaataccctcccaaaactatattttctttcttaacatggaaaacatacaacacctaatgcataattttctggtgaactgtttttttcctctaaagtgctttgtatgtgatgtaggtaaggtatgcgacacagttgccttttgttttgaaaggcctaacttgcactttacccagaggattgaggaccggtatcgtcggaagaactggcaatggcaagtcaaccttgattcaagcactattccgcatcgtcgacccatgtattgggcaagtgttgatagatggccttgacatttgcaccattggactacatgatctacggacaagattgagcatcattcctcaagatcctgtgatgtttgaggggaccctacgaaataacattgaccctttggaggagtacagcgatgagcaaatctgggaggtaattcttattttaaatttactagtacctccatccctaaataacatatggaagacaaattactatagaaaatacatgacattcataccccaaattaaatgagggatggattgaagagagagggtagttagctttagaagcatacttattttggggacaaaacttgagtgttagaaatatacttatttagtaatggaggtagtataatttgtaatgcttcgtatgtgcacctatgttttttttaaaaaaaaatatgcataactcatatctgctattcgatgggcaaaagagttcacttgtgtatatatgttatccaggcattggactcttgtcatcttggtgatgaagttagaaagagtgatctcaagcttgactctacaggtttcatatctatatcagaaagctataatgcattgctccacgatgtcaaactcataacttatactttaatatgaaatgcagttacagaaaatggcagcaactggagtgcaggtcagcgtcagcttgtttgtttgggaagggtggttctaaagaagcgaaagatcttggttttggatgaagcaacttcttcagtggatccaataactgacaatttgattcagaaaaccctgaagcaacaattctccgaatgcacggtgattaccatagcacatcggatcacatcagttcttgatagtgagaaggtcattcttatggacaatggttagttatgtgcctaaggtttacttagtagccaacagttaatagcttggttctcccgttctaattccatgttattgtaaacaggtaaaatcgcagaggctgactcgccagcaaaacttctggaagacaatttatcgttattttcgaaacttgtatcagaatacaccaagggatcagagtattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0288733, RefSeq:Os02g0288733