Difference between revisions of "Os02g0318500"
(Created page with "{{JaponicaGene|
GeneName = Os02g0318500|
Description = Similar to PDR6 ABC transporter|
Version = NM_001053213.2 GI:297599108 GeneID:4329158|
Length = 16198 bp|
Definitio...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os02g0318500| | GeneName = Os02g0318500| | ||
Revision as of 19:13, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os02g0318500 |
|---|---|
| Description |
Similar to PDR6 ABC transporter |
| Version |
NM_001053213.2 GI:297599108 GeneID:4329158 |
| Length |
16198 bp |
| Definition |
Oryza sativa Japonica Group Os02g0318500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:12692831..12709028 |
| Sequence Coding Region |
12692831..12693100,12693196..12693450,12693997..12694168,12694254..12694481,12694627..12694760 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:12692831..12709028 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:12692831..12709028 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcctgattccgcccctgcggttggcattgaacttccgaagatcgaaattcggtacgaggagctctccgtccaggcagacgccttcgtcgccagccgcgccctacccaccctttccaactctgccatcaactttctccaggcaccaaatctacacagtgagcgatatcgatggcgtagaagtaggacgatggggcttattggacaatttggttcttcaaacaagaagaccatcaatatactaaagcaagtcaatggcatcctcaagtcatccaggatgactctccttcttggacctccatcatcaggaaaaagcacacttatgcgagcgctcactgggaaacttgataaaaacctcaaggtatttggtaatatcacctattgtggacataaattttccgagttctatccagagcggacaagtgcctatgttagtcaatatgatctccataatgcagagatgaccgtaagagagacattagatttctctaggtggtgcttaggtattgggtcaagatacgacatgctcacggaaatctctagaagggaacgcaatgcaggcattaagccagaccctgagatcgatgctttcatgaaagctactgcaatgcaaggacaagagactaatatcataacagatcttattctcaaggtgcttgggctggacatttgcgctgatactattgttggtgatgagatgattagaggaatttctggtggacaaatgaagcgtgtgacaacaggggaaatgttaacaggaccggcaagggctttgctcatggatgagatatccactggcttggatagctctagcacatttcatattgtaaaatttattaggcatttggtccatataatgaatgaaactgtgatgatctctctcctccaaccaccgccagagacatataatctctttgacgacatagttctactatcagaaggatacatagtctatcatgggccacgcgagaatatattggaattttttgaagcttctggctttcgatgccctcaaaggaaagcagtggctgacttccttcaagaggtcacttccaagaaagaccagcaacaatattggttccttgacaaggagccttattgttatgtgtcagtcccagagtttgcagaacgtttcaagtcattttatattggccaacaaatgatgaaggagcaacatattccatttgaaaaatcaaaaatccatcctgctgcactgacaacaatgaaaaatgcattatccaactgggagtcattgaaggctgtgctttgtagagagaagttgttgatgaaacgcaactcttttctttacatattcaaggtcacccaattgatcattcttgctttcttgtctatgaccgtgtttcttagaacaaagatgccccatgggcaattttctgatggcactaaatttcttggggcattgacattcaatttaataacagtcatgttcaatggcctttctgagctaaacttgacagtaaagaagcttcctgtgttctacaagcatagagattttttattcttccctccatggacctttggggttgcaaatatactaataaaggttcctgtatctcttgtggaggctacggtctgggttgtcatcacgtactatgtgatgggatttgcaccagcagcaggaaggttctttcgtcagtttctagctttcttcgttactcacctaatggcaatggctctgtttcgatttcttggtgctatcttgcaaacaatggttatagcaattagttttgggatgcttgtgttgcttattgtcttcgtctttggaggatttgtgatacgtaaaaatgacattagaccatggtggatctggtgttattgggcatctcctatgatgtatagccaaaatgcaatatcgatcaacgaatttctggccagtaggtgggccattccaaacaatgacacaaccattgatgcaaaaacggtaggtgaggctattctaaagtcaaaaggcttgttcactggagagtggggattttggctatccattggagccctagtaggattcattattttgttcaacaccttatacatcttggcacttacatacttaagtcgtgctaacggagaaggaaataggccaactcagtcacaatttgtcttacctttccaaccattgtcactttgtttcaaccatctaaattattatgtggacatgccctcagaaatgaagcaacaaggactcatggaaagtcgtctccaactgctctctgatattagtggtgcttttaggccaggtcttctaactgcattagttggtgtcagtggagctggaaagaccactttgatggatgtcttagcaggaaggaaaactagtggaacaattgaaggaagcataaccctttctggttactccaagaaacaagaaacgtttgctcgcattagcggctactgtgaacaagctgatatccattcaccaaatgttactgtatatgaatccattctctactctgcttggttgcgccttccctcagatgttgatagcaatacaagaaagatgtttgtggaggaggtcatggcccttgtagagcttgatgtattgtgcaatgctatggttggtctccctggagttagcggtttatcgactgaacaaagaaagcgattaacaattgctgtggagctggtagcaaatccttcaatcatctttatggatgagcctacttctggtcttgatgctagagctgcagcaattgtcatgcgaactgtgagaaatactgtcaacactgggcgtactgtggtctgcacgatccatcagccaagcattgatatttttgagtcttttgatgagcttttgcttttgaaaagaggaggtcgggttatttatgctggtgaacttggtgaccactcacataaactagttgaatattttgagacaattttaggtgttccaagtattacagaaggatataatcctgcaacatggatgctagaagttagctccactctagaagaagctcgcatgaacgtagattttgctgaaatttatgccaattccctgctttataggaaaaaccaagaacttattgaggagttgagcattcccccaccaggctatcgagatctcttatttgctacaaaatattctcaaagtttctatatccaatgtgttgcgaacttatggaagcaatataagtcttattggaagaatccatcttacaatagcttgcgttatctaacaacgtttctctatggccttttctttggcacagtattttggcaaaaaggaacaaagttagactcacagcaagatttgtacaatttactcggagccacttatgctgcaatcttcttcattggggctactaactgcatgtcagttcagcctgttgtatcaattgagagagcagtttactatcgtgaaagcgcagcaggaatgtactctccattgtcctatgcatttgctcaggcaagcgtggagttcatttacaatatcatacaagggattttgtacacggtcatcatctatgcaatgatcggatacgattggaaagctagcaaattcttttattttctattcttcattgtttcaagcttcaactacttcacatttttcggaatgatgttggtggcatgcaccccatctgcactgcttgcgaacattctcataacctttgcactccctctttggaacttgtttgctgggttccttatttttaggaaggcaataccaatttggtggaggtggtactattgggcaaacccagtatcctggacaatatatggtgtcattgcatcacagtttggagggaacggtggatcgatttcagttcctggtgggagccatgtagcaatgagccaaattttggaagataatgttggcgtccgacatgacttcctaggatatgttatacttgcccattttggctttatggccgcctttgttctcatctttggctattccataaaatttctcaactttcagaaacgttag</cdnaseq> |
| Protein Sequence |
<aaseq>MPDSAPAVGIELPKIEIRYEELSVQADAFVASRALPTLSNSAIN FLQAPNLHSERYRWRRSRTMGLIGQFGSSNKKTINILKQVNGILKSSRMTLLLGPPSS GKSTLMRALTGKLDKNLKVFGNITYCGHKFSEFYPERTSAYVSQYDLHNAEMTVRETL DFSRWCLGIGSRYDMLTEISRRERNAGIKPDPEIDAFMKATAMQGQETNIITDLILKV LGLDICADTIVGDEMIRGISGGQMKRVTTGEMLTGPARALLMDEISTGLDSSSTFHIV KFIRHLVHIMNETVMISLLQPPPETYNLFDDIVLLSEGYIVYHGPRENILEFFEASGF RCPQRKAVADFLQEVTSKKDQQQYWFLDKEPYCYVSVPEFAERFKSFYIGQQMMKEQH IPFEKSKIHPAALTTMKNALSNWESLKAVLCREKLLMKRNSFLYIFKVTQLIILAFLS MTVFLRTKMPHGQFSDGTKFLGALTFNLITVMFNGLSELNLTVKKLPVFYKHRDFLFF PPWTFGVANILIKVPVSLVEATVWVVITYYVMGFAPAAGRFFRQFLAFFVTHLMAMAL FRFLGAILQTMVIAISFGMLVLLIVFVFGGFVIRKNDIRPWWIWCYWASPMMYSQNAI SINEFLASRWAIPNNDTTIDAKTVGEAILKSKGLFTGEWGFWLSIGALVGFIILFNTL YILALTYLSRANGEGNRPTQSQFVLPFQPLSLCFNHLNYYVDMPSEMKQQGLMESRLQ LLSDISGAFRPGLLTALVGVSGAGKTTLMDVLAGRKTSGTIEGSITLSGYSKKQETFA RISGYCEQADIHSPNVTVYESILYSAWLRLPSDVDSNTRKMFVEEVMALVELDVLCNA MVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNT GRTVVCTIHQPSIDIFESFDELLLLKRGGRVIYAGELGDHSHKLVEYFETILGVPSIT EGYNPATWMLEVSSTLEEARMNVDFAEIYANSLLYRKNQELIEELSIPPPGYRDLLFA TKYSQSFYIQCVANLWKQYKSYWKNPSYNSLRYLTTFLYGLFFGTVFWQKGTKLDSQQ DLYNLLGATYAAIFFIGATNCMSVQPVVSIERAVYYRESAAGMYSPLSYAFAQASVEF IYNIIQGILYTVIIYAMIGYDWKASKFFYFLFFIVSSFNYFTFFGMMLVACTPSALLA NILITFALPLWNLFAGFLIFRKAIPIWWRWYYWANPVSWTIYGVIASQFGGNGGSISV PGGSHVAMSQILEDNVGVRHDFLGYVILAHFGFMAAFVLIFGYSIKFLNFQKR</aaseq> |
| Gene Sequence |
<dnaseqindica>15929..16198#15579..15833#14861..15032#14548..14775#14269..14402#14028..14111#13591..13881#13156..13488#12848..12954#12319..12484#12102..12205#11817..11977#10816..11716#10648..10738#10281..10571#10100..10184#3934..4016#677..723#349..473#1..20#atgcctgattccgcccctgcgtacgttgttgtaccacatgtcacgctgtcttctacttagcttttcagctcaactgctacctcgttttcggttaacacatttttctcaaacagctaaacgatatattcttgaaaagaaagttctatatagatatttcttttaaaatttaaataaatttactttttaagtttatagttaacaatagtacttacttaatcattctataatggttctctttgttttatgtctcgccaaaagtttgagtccaactaagcccagttaagtctttattttctttgttcaatttctcgcgtttatttacatggtcctgctgctgcatacacgcagggttggcattgaacttccgaagatcgaaattcggtacgaggagctctccgtccaggcagacgccttcgtcgccagccgcgccctacccaccctttccaactctgccatcaactttctccaggcacgtactaccttagatcagtcccaactcagtcctaaaataacgtcaatatacatagacaggaagtattatatatatttgctctgatctattttatagagagaaaatatcaccaacagttaatgaataaattgatccattaacatctaatgatagaacgcaaaaattttaagtgtattttataattaatatcattcctcaatatagcaaatctacacagtgagcgatatcgatggcgtagaagtaggacgatggtaaaacagagaagttatgcaaaatacgatagtatattatatatagaatcaaacgaagtcaaattatagaactaggccataacatttaaccgaagccactaatgtttcttagcctgtaatggttagagatatattatagaactagttcatttccaatggttcataaagattttaaatggttcttgattacaaactatttggtccgttcaaacgtgggttttttgtttggaatgtttgtgctatgcaaaatagggctagtctctaaaatataattaattgagtattaattataataaatttaaaaattggtttatttattttttaaaaaataaacttatatataaaaagtttttttggtttagaacgggtgctatagataaatgagttgcaaaagctaaacgagctactgaactaagcctttagacgagagagttgcatggtcctttgagaaagaactagctaggtggcccgcgcaattacgcggctagcacctaaataaaattatctatttcttacatataattttacttaaattttgtttaatagttgccttgtagtcttaggactttgaaacatcaaaccttatcatcaccgtgtttttaattttatatttttaaaagtcatgccagtcgttaccccttacttctttgtcacacctttatttgcttttttgatctaccaccatttctatccatagtccttggaacctttaaaaattggacatcgtagtttttagagttcattctcttgttgggtttcgtttttataatttttaaaagtgctaccaaatatactgccactatactcctctagggtccattcactgcctcctctattcattgtcaatgggattttaaaaatcaagcataattaccgtttgggtttatttttttacattctagaaatcccgccaaaccgtcagcggtttcgctattatacttatctactgcccacccgctgtctcctctctttattgtgattgggattttaaaaatcaaacataattatcggttgggtttatttttttactttttaaaagtttcattaaaccgttagcggcttcgccactgtactcctctagagctgcccgctgcatctcctctttattttcattaagattttaaaaactgaacatgactatcattggtgtttatttttcctctacggcctaccagctgcttcccctcttttttttttttgagattttaaaaatcaaacatgattagcattgggtttacattttttacttttagaagtctcgctaaccaccgtgaccatgctacttaacttagcgatggcctgatctcgggatgttcttgatattttttcacttcaaaatccgattccacatctgtatatcaaagctgtccgtttgattttatttttcctatttggaatccatgtggtatccatttttttccctttcccccattcggacaatatcctagcccaaatacaatcagtactcaaacatgcatgcctgcgcgtgacgtaacgtgagagataagactgactctcctatttgtattaagtagagtttgtttcatacttggagaactttttttctgataaatctacaccctttaatctaatgcattaaaatctaatggtttagatatttcttcttttcttcgattaatgtaggaatttctagcctccatagcaaacatgatgtcttcttttaaggctgatttaataatataatagataaattgatgcatagggattgaattttctaaatgaaattcattgggatgggttgtgcatgtacagtgtggacattagtaatgggttcttagccttgtttattaggaatatttactgatatacaggagggagaagagaggatagataaacatcattactacggttaccaatggctcaataactattattagcctttgtaaatggaaactttgatgtatgagaggggaaaaaagaaagactagtaataaaatgtatatttttatagataaatggttagagtatttattgtcttaaccgtaacgtcatagtctctaaataaactagataaataccccgctgcgttgctacggaaaattaagttacataatatgtaaaaaaatatgtaatatgattatcaaaactaaaacaaattgatattattttaaacctaaaaaataattaagattgcatggttttataagagaagaagaagagaaaatttgaaccatagatgtatcatccaaaggctagaaataattgatttgatgtgacttaatgagagtagagagaaataacattaactaagtggggatgaactatataagtatataagatgcgtatcacctagcctaagagaaaaaaaagtcacactcctattcatgtcctgccattgctaaccacctctaacttatagttactctttaaaaaaataagtaacataagaaattagtgctatttagttataggtataaatctatatatactacacccgtaaattattgagtttgtgtaaaaaaaacaccaattaactatgaaacataaaagtttacaccccctctactatcaaaaccggccaaaatacccctctaagtgcaatacaatctggttttaatattagttcacaattttaaaatcaaaattttgatgttttacttatgtaccacctatacttagcaagatatggtccattatctatggaaacattcattacagttcctcaaatctcaaagccccctaggtccatagtgttttttcaatgatgtgatgcctacatagagtccacaactccacatggacaaatagtgatgacttcaatataaataataaacaagaacaaaacaaacaaaaaaaagagaagaaaatactacaatgtgtacatgtcaagctcagtttcctcctttttctttcatatcctatacatatatttttgaattgctagaattacttgtggcaccacatcattataaaccaccctggtttaggcctaaggacgaatcatgaacactttgaagagttcagagaccaatagtgattggtttcctatttttcactttttacttaaagattgatttcatagtcgagagaccaaaatcgaatcaagaccatatatacatcagggactaaatatggaatgtttccctttttctaagttaagcctgatagttgaggggtataatatgggcttatttgttatttatatgttcgtgatgaatagaatgtgaagttgtttttattaaatggcaggggcttattggacaatttggttcttcaaacaagaagaccatcaatatactaaagcaagtcaatggcatcctcaagtcatccaggtatagactcaaggaaataaatgttgttcaaaacaataagatcaaatttcacataccatgagaatacaaggagtatacaacatttgatacccaaagtcatttgacctagctaacacatttatcgagcattagtagatcagggtgtgcagtcaccgtcttataatttatatgtatagatagcaaaattacttttactaaagttaacaaataagatgcgaactaaaattttaccatactttctctaaaatactagtacaccataggtagagcttacacaaccctaaagaagttgtggaccaatggttaaatggctaggtgtagaatatgttttcattacgagtaaagtgtacgggcggttcttaaacttgtagggtgtgtcatttaggtccctatactctcaaaatgcatatccaagtcatagaacttgtcatagtgtgtcatctaggtaccaaatcgccacaaccccttcaggatactacatggcgttgatgtggcatgccacatggacatgacatggcattattttgactgacaaatgggacccatttaattttttccctttttctgtttttcttctcttttttcccctttcttctcctttctctatgatccgtgttgaagaaaggaaaaaaaagaagaatgggaagaaaatgaaaaagaaaaggaaaggaagaaaaaaagaaaaggacacgtcacgtccatgtggcattgttacatcagcgccatg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