Difference between revisions of "Os02g0515600"

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(Created page with "{{JaponicaGene| GeneName = Os02g0515600| Description = LPS-induced tumor necrosis factor alpha factor domain containing protein| Version = NM_001053491.1 GI:115446352 GeneI...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0515600|
 
GeneName = Os02g0515600|

Revision as of 19:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0515600

Description

LPS-induced tumor necrosis factor alpha factor domain containing protein

Version

NM_001053491.1 GI:115446352 GeneID:4329476

Length

3765 bp

Definition

Oryza sativa Japonica Group Os02g0515600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19371487..19375251

Sequence Coding Region

19371664..19371747,19371842..19371968,19374910..19375163

Expression

GEO Profiles:Os02g0515600

Genome Context

<gbrowseImage1> name=NC_008395:19371487..19375251 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19371487..19375251 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaaggcggcgttccccgcgccggccggcgacgagccggcgatcggcatcccgtaccatccggcggcggcgggggcccagggcggttactactacgcgccggacccctacgcggcggggatgcccccgccgaacgcgatctacgccggcgcgcccaagggggtgcccctgcagcagaccatgttccgcgacacccccgcgccattccactgccaggcctgcggcgccgcggccgtctcctccctccggtcgaagccaagtctagcatcagttgtggcttgcatgatgcccttcatgatgggcgtctgcttcctttgtccttccatggactgcctctggcacaaataccactactgccccagctgtggggaaaaggtggctgagttcaagaagtcggatccgtgcctcgttgtggatccaactcgctggtctgaaccgagcttcgctgtgcctgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAKAAFPAPAGDEPAIGIPYHPAAAGAQGGYYYAPDPYAAGMP PPNAIYAGAPKGVPLQQTMFRDTPAPFHCQACGAAAVSSLRSKPSLASVVACMMPFMM GVCFLCPSMDCLWHKYHYCPSCGEKVAEFKKSDPCLVVDPTRWSEPSFAVPA</aaseq>

Gene Sequence

<dnaseqindica>3505..3588#3284..3410#89..342#acaacctgacagccgcggcgagacaagtcaagattcaaaccaacccaacccaacccaaccgccgtcaccgacgacgaccaccaccaccatggcggccaaggcggcgttccccgcgccggccggcgacgagccggcgatcggcatcccgtaccatccggcggcggcgggggcccagggcggttactactacgcgccggacccctacgcggcggggatgcccccgccgaacgcgatctacgccggcgcgcccaagggggtgcccctgcagcagaccatgttccgcgacacccccgcgccattccactgccaggcctgcggcgccgcggccgtctcctccctccggtgagaacccgccgtactcgcccccctgcagtctttttattgtggcctttacctgcgattcgaagggatagatgtggaattcgagcggttgataggtcgagattgccagcattcggtgtattgatctgcaacgagtactagattgttcggtagtctaatctgcaccgtgaaaagggagaagaagaaatcgatactttctaggttgtcgaaaccagagaagctcaagccctggtggagttccccatgtttttcatgtcatctgtttcttgttattcgtttgctcttatccaagtcgcattcacgattggctttctgttaagttgagtttctataggggaggtgagaatttgagttattgttaaattatgaatctgatgatatgaggaagagaatataataggttcatagtatatcagttacaaacttgtaattactctcccattttaaggtttacaacagatgcaaatcaagggcctaagtctgcttggacaacataatccttaccagtgcttttgtatcatcttgatgtaattggatgagttcaataaaagattccattatctgaaaacatgaacttacaaatactactccctccgcccctaaatataagggattttggttggatgtgacacatcctagtacaataaatctggacaagagcttgactagattcgttgtactaagatgtgtcacacccaactaaaatcccttatatttagggacggagagagtagaagaaaggcattcttccatctggtagaaaacactttgaagagttccttgtgttctgaacccttctaggtcagttgaaataacatgtcagagcttgtactggaagctaaaagttacacgaacatatttagctttcttcttctaatgaagagtctcgagcgctagagttaatcatgcacttaggacatgtaacacctagtttagctaatatataacatgaccatcgtaataaaacacaataacagaaattggcagtcatatatactagccactttgtcgcacgttgcgtgactttgatgcccacattgacaagtatgtaaaagttctatgagtaatgtctattggatatatgtgcggaatttcaatttttatatgaagaacttgataaagaactactatggattttatttcattttattttttcatcttaaattgaataaatgtttaacttatcaagtgtataaatgtctttcagtttgaaagaagaagattcattttaatagaattcatattttattagtagaaaagtttattttgatttttcttttaaagttgggtttcatggtataatggataatcatcagtctgtttaagctccagtcacatgaagaaaagaggatggaatttctgctttccggctgctattaggaaggaatttataatggttcaattaagcccattattctgtttgggccatcgattactcagagccaccaacaaattgctttgtttccatcgctggtggaactcttccctctccttttctcctggaagcctcttgaagcctccagacaaccccttctttattttgaccttttgattctttgttggtctctatatccaacggtaaattttgtttcaaagctgtatctgacggccattagtcttttgatgatgtggcaaatcctccactcgagaaagaataattctttcactactttagattagatctatatatatggatgtttgtgaattgtaacatggtagccatctacttccactaacttgtcacttgtgttatttagtagcctctgtactcaatgaacaggtccgaagatacaatttttttcccagtccatgggaggtattgtgtggcagaggtattttttttatgttaattggaaggtattgtacctctattgacaggtatatatctcctgccactgtaggaaccaaattatagcatatttttatagcattgcgaaaaaaaggaaccaaattacatcttgagctaagctcattttctgtttttgaactgctgccgagaccatctaattggctgtgctaaggcttactgaagctcatctgagcttgcatgattcttggaattgtttgcaatcagctttatatctgaattgagtgttactctgtttttaaatgaccgtctttcgtatgtttcctggcaatattgctgcccacattgctaagtgtctgttgcattaagtccttacatctgaaacaacttttggtgaacgatattagtctttatgtttgaaaggtgttatttttgggattatatagaaacaagtattagaagacaaactgtatcaaaaacagtctacttgtttcaaccatatatacaagagaggcgcagtatacctttctagtggggtctgccctttattattattattatgttcgtaattgcatttgcatttatgaggcgcaaatcagatggtgccactaaatatgatgaagtggcactatatgagttttgttactagttttgaattgggctttgaaaagaaccaaagaccatctaaatatttgcctgcattatctgttctagttaactctgaatggttgcatgagctatggattgagacaatttgtcagatttttttgtgaaccgaaaatcatgtgtcagcttggtgatgcaagatttgactgctgactgctgagtagtgagtaatggttttatatgctaaagttggcgatgcaagaatgggcacgaataacacatttcttgtatttattttcctgatagggaaatgaactggcacaccatagttaagcctgagccccatattgatactataaatttgggtcttagtgcattattttagttgtaagtagctgtcgatttgtgtgttatgatttcctactccacacctcaagaccagtagcaccaataccataccaaacatatcattaggtgaagcttcattacttaaaaaaacacactcatggctgttgttgctttgaacaggtcgaagccaagtctagcatcagttgtggcttgcatgatgcccttcatgatgggcgtctgcttcctttgtccttccatggactgcctctggcacaaataccactactgccccagctgtggggaaaaggttcgccatcgtcttgtccaaacgctgttctcccattgagctttttctttcagttttttttttcaactttcttttgaatgcactcgatctgcaggtggctgagttcaagaagtcggatccgtgcctcgttgtggatccaactcgctggtctgaaccgagcttcgctgtgcctgcgtaagaacataccctcttgatatccaaaccgtttccatggatgagaactatgcattgttcttgagtgatctgctctgtacatagagaaggcaactaccttgttgtataccatatatatgtatctaaaccgctgtattttcgctaaagtaatgaactgtttattcatgtttgtcactcgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0515600, RefSeq:Os02g0515600