Difference between revisions of "Os02g0537800"

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(Created page with "{{JaponicaGene| GeneName = Os02g0537800| Description = Clp, N terminal domain containing protein| Version = NM_001186082.1 GI:297721296 GeneID:9269716| Length = 3684 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0537800|
 
GeneName = Os02g0537800|

Revision as of 19:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0537800

Description

Clp, N terminal domain containing protein

Version

NM_001186082.1 GI:297721296 GeneID:9269716

Length

3684 bp

Definition

Oryza sativa Japonica Group Os02g0537800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20753043..20756726

Sequence Coding Region

20753043..20753381,20754075..20754298,20755043..20755328,20755515..20756726

Expression

GEO Profiles:Os02g0537800

Genome Context

<gbrowseImage1> name=NC_008395:20753043..20756726 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20753043..20756726 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagctggggggtgcacggtgcagcaggcgctgacggcggaggcggcggctgtggtgaagcaggcggtgagcctggcgcggcggcgcgggaacgcgcaggtgacgccgctgcacgtggcgagcgcgatgctgcaggcggcgggggcggcgccggcgccggggctcctccgcgcggcgtgcctccggtcgcactcccacccgctgcagtgcaaggccctcgagctctgcttcaacgtcgccctcaaccgcctcccggcgtcggcgggggcgtcgccgctgctcggccatggccacggcgtcggcgtctactacccgccgtcgctgtcgaacgcgctccacgccgtcgccgaggtgcgcgccctggcgtgcggcggcggcggcggcggcggcggcgtttggctcgtcgggcacggcacgtaccagacgaacatccggtgccggacggggcacccctcgctggagactctctggggcctccacacgctcgccgtccccgccggcagcctcgccctcagcctcacctgcgccgacgccgacgccgccgccgacgacgacgacagtggtgcaatggcagcagcagcagtcaatcaccagtcagccaaaggcgcgaacggatcgacgtcgccgtcgccttgcctgtcacttttggacgctgctgcagcaggtggcgcctgcagctccgggcagctggcggtgatggccgccgccgtctccggcgcctactgcggcggcgattgcgccgccgcgacgaaagcactgctgccacagtcagtcgtcttcatgccgccgtcggcgacgacgaccaccaccaccatccctccatggctgcaccattgccgcgatcaggagcctgcagctcatatgaagaaatggatgtcggcgcatggcggctcgccgtcgcgcaggacggcgctgaacatctcgtccacggcggtgtcgccgtgctcctccgtctcgtcctacgagcagtacacccggttgcaccagccgtaccagccatggctcgtcgccgacgacgacgacgaagccgaagagacgaagcatccatacatcgccggcgatggcggcgctggtaggcttgtgccggcggcggccaaggtggtgatcaagtccgacgactcgagcgcctccaatggctccgtggaggtggagtggcggcggcccaggttcaaggaggtgagcgccgagaacctcaaggtgctctgcggcgcgctggagaaggaggtgccgtggcagaaggtgatcgtgccggagatcgccagcacggtgctccggtgccggtcgggcatggcggcgcccgccatggcgaggaggtcgagctcttgctcgagctccaaggagcacacgtggatgctcttcctcggcggcgacgcggatggcaagttgagggtggcgagggagctggcgagcctcgtcttcggctcgtccaagagcttcgtgtccatcggcggcgccgccaacgcgtcgccgccgccgtcgtcatcgtcgtcgtctccggcgcggtcgtcgggctccaccgagcagccgcaccggagcaagcggccatgggcggagacgacgacgacgacgacgagcgggcgggaccaggaccacctcgaggcgctctacgacgccgtgcgcgacaacccgcggcgcgtcattctgatggagcgcgtcgaccgggccgacgcgcggtgccacgacggcatcagggacgccatcgagcgcggcgtggtgcggagccgcggcggcggcggcgaggaggccttcctcggcgacgccatcgtcgtcctcagctgcgagagcctcaacccaagttcgacgacgccggcgaagaaggccaagacggagtacagcgtggagaagctcgaccaggatggtgatgatcaccatggcaaggaagccgtcgcggcggcggcgtcgccgtcttgctttgatctgaacatgagcatggacgacgacgacgaggcggcggaggagcgttgcaccggcgaagaagaagaagcaggccatcatcatcatcagctgctgctcaaggcagtagacagggtgctgttcttcagatcaattggggaataa</cdnaseq>

Protein Sequence

<aaseq>MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAM LQAAGAAPAPGLLRAACLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVG VYYPPSLSNALHAVAEVRALACGGGGGGGGVWLVGHGTYQTNIRCRTGHPSLETLWGL HTLAVPAGSLALSLTCADADAAADDDDSGAMAAAAVNHQSAKGANGSTSPSPCLSLLD AAAAGGACSSGQLAVMAAAVSGAYCGGDCAAATKALLPQSVVFMPPSATTTTTTIPPW LHHCRDQEPAAHMKKWMSAHGGSPSRRTALNISSTAVSPCSSVSSYEQYTRLHQPYQP WLVADDDDEAEETKHPYIAGDGGAGRLVPAAAKVVIKSDDSSASNGSVEVEWRRPRFK EVSAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRSGMAAPAMARRSSSCSSSKEHT WMLFLGGDADGKLRVARELASLVFGSSKSFVSIGGAANASPPPSSSSSSPARSSGSTE QPHRSKRPWAETTTTTTSGRDQDHLEALYDAVRDNPRRVILMERVDRADARCHDGIRD AIERGVVRSRGGGGEEAFLGDAIVVLSCESLNPSSTTPAKKAKTEYSVEKLDQDGDDH HGKEAVAAAASPSCFDLNMSMDDDDEAAEERCTGEEEEAGHHHHQLLLKAVDRVLFFR SIGE</aaseq>

Gene Sequence

<dnaseqindica>1..339#1033..1256#2001..2286#2473..3684#atgagagctggggggtgcacggtgcagcaggcgctgacggcggaggcggcggctgtggtgaagcaggcggtgagcctggcgcggcggcgcgggaacgcgcaggtgacgccgctgcacgtggcgagcgcgatgctgcaggcggcgggggcggcgccggcgccggggctcctccgcgcggcgtgcctccggtcgcactcccacccgctgcagtgcaaggccctcgagctctgcttcaacgtcgccctcaaccgcctcccggcgtcggcgggggcgtcgccgctgctcggccatggccacggcgtcggcgtctactacccgccgtcgctgtcgaacgcgctcgtcgccgcgttcaagcgcgcccaggcgcaccagcggcggggctccgtcgagacgcagcagcagccggtgctcgccgtcaagatcgagctcgagcagctcgtcatctccatcctcgacgaccccagcgtcagccgcgtcatgcgcgaggccggcttctccagcacccaggtcaaggccaacgtcgagcaagccgtctcttcctccatggaagccgccaccaccaagccccaaaaccctaaccctagcagcagctcgcctccgccggcggctcatcaagaggcgaaacctagtagatgcatcgatcaggtggtggtgcgggaggaggacgtcgcggccatcctggactgcctggcgacgcggagcaagaagcgggtcatggtggtcgccgagtgcgccgccgcggccgaggcggcggcgcgggcggccgtggacaggatcaggcgcggcgaggcgaggcagcacgcgcaggcgcaggtggtcaccctcgccgtgtcccggttccgcggcgcgccgagggaggaggcggagcggcggctggcggagctccggtgcgccgtcaggggcggcggcggccgcgcggtggtgctcgtcgtggaggacctcgcgtgggcggccgagttctgggccgggaggaggccgccgccatcctcctgcggcgcaggcgccggcggctactactactgcgccgtggagcacgccgtcgccgaggtgcgcgccctggcgtgcggcggcggcggcggcggcggcggcgtttggctcgtcgggcacggcacgtaccagacgaacatccggtgccggacggggcacccctcgctggagactctctggggcctccacacgctcgccgtccccgccggcagcctcgccctcagcctcacctgcgccgacgccgacgccgccgccgacgacgacgacaggtaattaattaacctaaccctaatcagttaagcgcggtgatataatccattttaatcaccatggatttgaaacgaaatgccagcgactgttcgaacacagttcgacgatcgatgtactctcatctatttgagatggttgagatggtacaattggcgcctttttcttcttgcctgccacgagtgatgagagctaaagctctcgcatctttccaagcttttcatcagggaatgagctagctaggtcatcagcttcacattatccctttagcttgcatctttgagtatttcctacgtactactactacatctttccttcaacactactatatatatatacattcatgattacaattaaggatctataccacctaactgaaacaattaatcagtgcgtgtgcattgtgtagaactgtaactaccacttcataagttacaacttgtacaagtcaaatttgaacttgcgtgtttgtgaagtgatatattacatacttgttaatttttttattttttttcaaaccatttagttacatacgagaaacgggtgtacgtccacccgagtatttaaaacaggttcccaaaattagatgtgtatagctactcatcagctagcaaagagtacatacctatatatatgcaggcatgatcaatacacatatatgttcatggtggggtagaatcttcagtgcatgacagatgaatcttatcaccatcttatatatatatcctgcatgcgtttgtttgcagtggtgcaatggcagcagcagcagtcaatcaccagtcagccaaaggcgcgaacggatcgacgtcgccgtcgccttgcctgtcacttttggacgctgctgcagcaggtggcgcctgcagctccgggcagctggcggtgatggccgccgccgtctccggcgcctactgcggcggcgattgcgccgccgcgacgaaagcactgctgccacagtcagtcgtcttcatgccgccgtcggcgacgacgaccaccaccaccatccctccatggctgcaccattgccgcgatcaggtaaaaatatatatacccacacaaattcacatttgccaatttgatcgagtgaatttaatttgctgttgtgtgttgaagttttccgtcttttcttatcagcttaggtttttgggttgaattgttcggtacatgtatagtggccactgactaattaggtttttgttgcactcttaattaattaagcaggagcctgcagctcatatgaagaaatggatgtcggcgcatggcggctcgccgtcgcgcaggacggcgctgaacatctcgtccacggcggtgtcgccgtgctcctccgtctcgtcctacgagcagtacacccggttgcaccagccgtaccagccatggctcgtcgccgacgacgacgacgaagccgaagagacgaagcatccatacatcgccggcgatggcggcgctggtaggcttgtgccggcggcggccaaggtggtgatcaagtccgacgactcgagcgcctccaatggctccgtggaggtggagtggcggcggcccaggttcaaggaggtgagcgccgagaacctcaaggtgctctgcggcgcgctggagaaggaggtgccgtggcagaaggtgatcgtgccggagatcgccagcacggtgctccggtgccggtcgggcatggcggcgcccgccatggcgaggaggtcgagctcttgctcgagctccaaggagcacacgtggatgctcttcctcggcggcgacgcggatggcaagttgagggtggcgagggagctggcgagcctcgtcttcggctcgtccaagagcttcgtgtccatcggcggcgccgccaacgcgtcgccgccgccgtcgtcatcgtcgtcgtctccggcgcggtcgtcgggctccaccgagcagccgcaccggagcaagcggccatgggcggagacgacgacgacgacgacgagcgggcgggaccaggaccacctcgaggcgctctacgacgccgtgcgcgacaacccgcggcgcgtcattctgatggagcgcgtcgaccgggccgacgcgcggtgccacgacggcatcagggacgccatcgagcgcggcgtggtgcggagccgcggcggcggcggcgaggaggccttcctcggcgacgccatcgtcgtcctcagctgcgagagcctcaacccaagttcgacgacgccggcgaagaaggccaagacggagtacagcgtggagaagctcgaccaggatggtgatgatcaccatggcaaggaagccgtcgcggcggcggcgtcgccgtcttgctttgatctgaacatgagcatggacgacgacgacgaggcggcggaggagcgttgcaccggcgaagaagaagaagcaggccatcatcatcatcagctgctgctcaaggcagtagacagggtgctgttcttcagatcaattggggaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0537800, RefSeq:Os02g0537800