Difference between revisions of "Os02g0568200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0568200| Description = NPH3 domain containing protein| Version = NM_001053716.2 GI:297599452 GeneID:4329720| Length = 5108 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0568200|
 
GeneName = Os02g0568200|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0568200

Description

NPH3 domain containing protein

Version

NM_001053716.2 GI:297599452 GeneID:4329720

Length

5108 bp

Definition

Oryza sativa Japonica Group Os02g0568200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22466026..22471133

Sequence Coding Region

22466201..22466821,22466892..22467682,22469402..22470080,22470361..22470430,22470531..22470658

Expression

GEO Profiles:Os02g0568200

Genome Context

<gbrowseImage1> name=NC_008395:22466026..22471133 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22466026..22471133 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggagtcggagagcgagagccacggcggcgagcgggggctcgtccccgtcggcggcggcggcggctcaggccggcacgaggcggcgctcaagaacgacggcttcgtccgcagagaccggtcttggtatgtcaacagtgacatccccagcgatctgctcgtcaaagtgggagacgtgaacttctaccttcacaagtatccgatgatctcccggagcgggcggatgagccgcgccgtgtacgagtcgtcggcggcagatgaggcggaggcggacgcggcggcggcggtggcggtggtggagatgggcgacctgccgggtggcgcggggtcgttcgagctggcggcgcggttcagctacgggatggcggtggacctgacggcggcgaacatctccgggcttcgctgcgccgccgagtacctggagatgacggaggagatggaggaagggaacctcatcttcaagacggaggcgttcctcagctacgtggtgctgtcgtcgtggcgcgactccatcgccgtgctcaagagctgcgaggcgctctcgccgtgggcggagaacctgcagatcgtgcggcggtgcagcgagtccatcgcctggaaggcgtgcgccaacccgcgcggcgtgcgctgggcgtacaccggcgccggcgccggcagcggaggagcgcgcgggggcccggcggcgatcaggggaggtggcggctctggcggcacggcgagcccgcggtggaacgtcggtggcggcggagggggggagtcgaaggagtcgagcccgagcaggcaggcggtgccgccggcggactggtggttcgaggacgtgtccgtgctcaggatcgaccacttcgtgcgcgtcgtcaccgccatcaaggtcaaaggcatgcggttcgacctgatcggcgcggcgatcacccactacgcgtcgaaatggctccccggcctcaccaaggacgccccgctcggcgccacccacgacgagccgtgggcgcaggcctccgccgccggcgtcggcggcggcggcctccacatgatgatcatctccggcgccggcggcggcaaggacgacgtcctcgccgcctgcagcgcgccgtcgcgcgagcagcgcatggtggtggagagcatcatcagcatcaccccgccgcagcgggacagcgtctcctgcggcttcctcctccgcctcctccgcctcgccatcatgctcagggccgccccggcgctggtcaccgagctcgagaagcgcgtcgggatgcagctcgagcaggcggcgctcgccgacctcctcatcccctcctacggcggccgcgccgccgacaccgcctacgacgtcgacctcgtgcagcgcctcgtcgagcacttcctggttcaggagcagacggagatggcggtggcgtccagccccggccgcggcgaccctccgccgccgccgcagccggagtactacagcgggaggatgccgccgtcgtccgcggccgcggcgtcggcgtcggcgtcgacgggcgggctgaacgccaaggcgcgcgtcgcccggctgctcgacagctacctctccgaggtctcccgcgaccgcaacctctccctcaccaagttccaggtcctcgccgagtcgctgccggagtcggcgcgcgcctgcgacgacggcctgtaccgcgccgtcgactcctacctcaaggcgcacccgacgctgacggagcacgagaggaagaggctgtgcagggtgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggctgccgctgcgggtggtggtgcaggtgctcttcaccgagcaggtcaagatcagcaacgcgctggcgagctcctccgcggcgctcaggtcgtcgtcttcggcgccgggggcggacgccgcgccggcgatgccgacgacgcggcggcagctgctggacgggacgccgcagtcgttccaggaggggtgggcggcggcgaagaaggacatcaacacgctcaagttcgagctggagagcatgaaggccaagtacctggagctccagcacgagatggacgcgctccagaaacaggtggacggccgcggcggcggcgcgccgtcgccggcggccgccaagatcggcaagcagcagcagcagggcacgtcggcgtcggcgtggagcagcgggtggaagaagctgggcaggctggccaagatgtccggcgccgacgcggcggccggtggtggcgtggcgccgcccggcggcggcgaggccgcggcgaggaagggcccgagaaggtggaggaactccatctcgtaa</cdnaseq>

Protein Sequence

<aaseq>MWESESESHGGERGLVPVGGGGGSGRHEAALKNDGFVRRDRSWY VNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEM GDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFL SYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGAGA GSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVSV LRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPWAQASAA GVGGGGLHMMIISGAGGGKDDVLAACSAPSREQRMVVESIISITPPQRDSVSCGFLLR LLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRLVE HFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSSAAAASASASTGGLNAKARVA RLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHER KRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVKISNALASSSAALRSSSS APGADAAPAMPTTRRQLLDGTPQSFQEGWAAAKKDINTLKFELESMKAKYLELQHEMD ALQKQVDGRGGGAPSPAAAKIGKQQQQGTSASAWSSGWKKLGRLAKMSGADAAAGGGV APPGGGEAAARKGPRRWRNSIS</aaseq>

Gene Sequence

<dnaseqindica>4313..4933#3452..4242#1054..1732#704..773#476..603#gtgctatatcttgcagtgcatagccagtactgtcactcagcctgcagtttattgtataactgtgcagttccgaaacaaacaagccaacagcccatgtggtcgtctccttcccataacctcatcgatcacaaggaccaatggatattcccccctttcatatcatttatcatatgcccttcaattcccgagctctctcactaaccagctactactagtttcccaccaatcagtgctcactgctcacctcagtcagtcagtagttcagtacaggcagcagcatcagcagcagcttcttcttcttcttcgattgggttcttgatcgtcgtcgtcgtcgatctgtgcctgtatgtacaagctcgcttgtttcatgattcatggtgttgatttattcatggcgacctatggcgtatctgcaggaggagaaggacgagaagtacgtggaaattaagtgaaggtctcagagacggcgagaagtatgtgggagtcggagagcgagagccacggcggcgagcgggggctcgtccccgtcggcggcggcggcggctcaggccggcacgaggcggcgctcaagaacgacggcttcgtccgcagagaccggtcttggtacgtacttaattagtaacactaattactagtggttaattaattaagctgaatctcgcgttcgtacatgttccaaatttgttgcttcgtttttgagcaggtatgtcaacagtgacatccccagcgatctgctcgtcaaagtgggagacgtgaacttctaccttcacaaggtatacaagttgggtcgcaaataaaatcctgagagtttcttgattggtactcatgctgcaactagctagtaattatcttaaacatactagttttggttaataatgaataatgaattaataattaataatgaatcaaatgataaaaaaagaattaacaattacttaaagcttttaataaaacgaacggtcaaatattttttaaaaagttaatcgcgtcaaatatttagacactgagagagtactaattagcttgttaatttggttgatcacgatggatcagtatccgatgatctcccggagcgggcggatgagccgcgccgtgtacgagtcgtcggcggcagatgaggcggaggcggacgcggcggcggcggtggcggtggtggagatgggcgacctgccgggtggcgcggggtcgttcgagctggcggcgcggttcagctacgggatggcggtggacctgacggcggcgaacatctccgggcttcgctgcgccgccgagtacctggagatgacggaggagatggaggaagggaacctcatcttcaagacggaggcgttcctcagctacgtggtgctgtcgtcgtggcgcgactccatcgccgtgctcaagagctgcgaggcgctctcgccgtgggcggagaacctgcagatcgtgcggcggtgcagcgagtccatcgcctggaaggcgtgcgccaacccgcgcggcgtgcgctgggcgtacaccggcgccggcgccggcagcggaggagcgcgcgggggcccggcggcgatcaggggaggtggcggctctggcggcacggcgagcccgcggtggaacgtcggtggcggcggagggggggagtcgaaggagtcgagcccgagcaggcaggcggtgccgccggcggactggtggttcgaggacgtgtccgtgctcaggatcgaccacttcgtgcgcgtcgtcaccgccatcaaggtcaaaggtaattaacacaacacgattacaaacaatgtttatgctttttttgagcctgcatttctctacaatttcagccagtgggatttccgaaaattttcaaaacgaacttcttgaattttgaaatgatttccactgaatttgaacctaaaattttctggaaataaaatgttttgtaaattttggtgaggattttttatacccaaacttgagtggattcaagacgatctgtcttcttaccggagttctattctggacgtacatatctagagatttttgctaaatctaaatcagtttacgacaaacttcaattaattgaaaaaaatcaagtgatctaaaattttatctggttcaaaaaattgtcaagggtatcgaagattgcaaaatttcttgagataccttcaaattattagcatgcttctgcttcttcgacctccacttaattgatgcggctctcgcaaggacgtggcttcgaacaataccgagcctttttagttgataaatcatgtgtaatcgatggatcgacggataagatatgataccgcggtaccgtctccttatagcaatggcttctctttttgctatctctcaattgccgtcagatataaagaggtaaattaatgggggtgaggcttctctaacgtacgtcagagggatatgcttcaataacttgtgggcctatgacggtggcggtgcacctattatgggtacatgtccctctgactttacgttaaagaagccatatccagattactggtaggggccaaccttgtccactccagctaacacatcattttgagtgggcaaaagatcaagtatatatataattttgggtaactacatggcaaatcatatattttccattatatataccatacaacatgattaatttgtcttgcactaaaagattctccggtagggaaaatagaatttgatggcaactcaaactatatctacaagtgttcttgaatagtgaaacagtgaggcatcatatgatttgcttaagcagcaatctaaggggttcccacaaagttcctttatagccttccccatcaaaattaatcctgatgcaatttatccctaccaaaataaattggattaattaggattcgacaagcatccttgcaagcacaggccccatgaaagctcaggataaatatgtgaacctcactaaatttcaaatttcgattggaagtatacaagtgagcatttctgctattagaggatgcaaaaacatctactactaaaagaacatttctacgggcacctaaaatggcctttgcacgggcagaaactgcctatggaaatgtagggtgtatttggttaccggtgacactttactacaactaagaaggtagtgacagccacaataaattgctagccacaaaatatagcaaagttgacaaaaaaaattgagcatatgacgtgtagaacatactattaaaaaaaatgtgtcaaaccataacatgaacctaataaactatggctgtcaaaagtgtggctatgaagtaaatagaccattagtttgaaaatatggtgtatccacgataaaactataatggctacagttaattattttgaaaaaaaaaactgcacaagataagtgcatgctaacaattgtaaaagatttaccccagacattaacaaatttgcacggtgcatatacagtagctgaactgtttcaagaattccatcaactaaaaacgtaagtttttttttttgacaggcatgcggttcgacctgatcggcgcggcgatcacccactacgcgtcgaaatggctccccggcctcaccaaggacgccccgctcggcgccacccacgacgagccgtgggcgcaggcctccgccgccggcgtcggcggcggcggcctccacatgatgatcatctccggcgccggcggcggcaaggacgacgtcctcgccgcctgcagcgcgccgtcgcgcgagcagcgcatggtggtggagagcatcatcagcatcaccccgccgcagcgggacagcgtctcctgcggcttcctcctccgcctcctccgcctcgccatcatgctcagggccgccccggcgctggtcaccgagctcgagaagcgcgtcgggatgcagctcgagcaggcggcgctcgccgacctcctcatcccctcctacggcggccgcgccgccgacaccgcctacgacgtcgacctcgtgcagcgcctcgtcgagcacttcctggttcaggagcagacggagatggcggtggcgtccagccccggccgcggcgaccctccgccgccgccgcagccggagtactacagcgggaggatgccgccgtcgtccgcggccgcggcgtcggcgtcggcgtcgacgggcgggctgaacgccaaggcgcgcgtcgcccggctgctcgacagctacctctccgaggtctcccgcgaccgcaacctctccctcaccaagttccaggtcctcgccgagtcgctgccggagtcggcgcgcgcctgcgacgacggcctgtaccgcgccgtcgactcctacctcaaggtaactagcacattacagctagctagtttccggtgatcgccggagttaatggcgatcgatcgatttgcaggcgcacccgacgctgacggagcacgagaggaagaggctgtgcagggtgatggactgccagaagctgtcgttcgacgcgtgcatgcacgcggcgcagaacgagaggctgccgctgcgggtggtggtgcaggtgctcttcaccgagcaggtcaagatcagcaacgcgctggcgagctcctccgcggcgctcaggtcgtcgtcttcggcgccgggggcggacgccgcgccggcgatgccgacgacgcggcggcagctgctggacgggacgccgcagtcgttccaggaggggtgggcggcggcgaagaaggacatcaacacgctcaagttcgagctggagagcatgaaggccaagtacctggagctccagcacgagatggacgcgctccagaaacaggtggacggccgcggcggcggcgcgccgtcgccggcggccgccaagatcggcaagcagcagcagcagggcacgtcggcgtcggcgtggagcagcgggtggaagaagctgggcaggctggccaagatgtccggcgccgacgcggcggccggtggtggcgtggcgccgcccggcggcggcgaggccgcggcgaggaagggcccgagaaggtggaggaactccatctcgtaaatggagtagctgcctagctagatgctgtatggttgattggtttcaactttcaagtaatttcatgggtcttttgtattttgagagagtccattttgctcagtttgatgtagtgatgttcatggcgttttcagacagaattaatccattttatgcagagtctgaggactactcaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0568200, RefSeq:Os02g0568200