Difference between revisions of "Os02g0597800"

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(Created page with "{{JaponicaGene| GeneName = Os02g0597800| Description = Steroid nuclear receptor, ligand-binding domain containing protein| Version = NM_001053863.1 GI:115447096 GeneID:4329...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0597800|
 
GeneName = Os02g0597800|

Revision as of 19:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0597800

Description

Steroid nuclear receptor, ligand-binding domain containing protein

Version

NM_001053863.1 GI:115447096 GeneID:4329872

Length

4224 bp

Definition

Oryza sativa Japonica Group Os02g0597800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24095053..24099276

Sequence Coding Region

24095664..24095757,24096349..24096457,24096561..24096753,24096874..24097010,24097346..24097634
,24097733..24097839,24097916..24098060,24098285..24098483,24098563..24098806
,24098886..24099126

Expression

GEO Profiles:Os02g0597800

Genome Context

<gbrowseImage1> name=NC_008395:24095053..24099276 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24095053..24099276 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccgccgtctgggattcgggcatctgcctggagcttcttcaagttcctgcctttcttccttggccttctcctcctggggatcatcaaaggtgctttgctcttcccatgggcatggcttatcatgatgatcggaatctctgcactcgttcttggcttatggcctatgcatgtgatctggacatactactgcatcatcagatccaagcttgtcgggcctgttgtaaagctgcttcttcttgtcgccgcatctgtgattttagtcttatggctcattgtcgggatcgtgggaagtgtcctaattggtgtggtgtatggttttctcgctccagtaatggccacatttgatgcagttggagaaggaaaagaaagaccactataccactgttttgtggatggaacatggagtactataacaggaagctgtacagtagttagggacctgaaagatttattattgcattcatatttttcaataatggatgaccttcgttttcatgcacctcctggaggagagccatatgaaataagagtgcttgacattcctggtgcattattcgctgctgcgtgtggatttctagtggatggaataatgttcacactaattgccttctacaagttccctgtgatgcttttcaaaggatggaagcggctgatcgaagacttagtcggcagggaaggacctttcctggagacagcttgtgtgccatttgctggtcttgctattcttctgtggccatttgctgtttttggagcttttctagcctccatcatctccagtattcctttaggtgcttttgctgctgttgtggtttatcaggaatcctcgcttatcatgggactaaattatgtaatatcatcagtggccatctttgatgaatatacaaatgatgtgcttgacatggcaccaggatcctgctttcccaggtttaaataccggaaaaatgaagcttcgacagagggtggttcattatcaaggcctgcctcatttaaggacaagcaagacgggaagaaagctccatcacgtgttacatcgtttaagggcagctttgatgagttcaatccatttaagttgctagatcacctgtttgaggagtgtaagcaccgtggagaggttctggttgctgaaggagtgataacaccaaaagacattgaagaaacaaagtcaggaaaaatcgggattggagtacttaatgttggtttgccggcatatgttattcttcacgcactcattagatctgcaaaagctaattctgatggcctaattttaagtgatggttctgaaataacatctgataacaggcctaagaacacaatctttgattggttctttgatcctctgatggtcatcaaagagcaaataaaagcccagaattttacagaagaggaagaagcatacctcaagaagcgagtgctgctgaccagtgatccgaagcgcctcaaagaggttgttcctcatctgccatcatcactgaatgagcgaaaacaagctgaaatcgacgcactttcccggagattgcaaggaatcacaaggtcgatatcaaggtacccaacggccaagcgtcgtttcgacgaccttgtcagatcactctcggaagagctcgagaggacaatgggtggcagccaatctggcagtgtgtcccagatgcagaaactgagaagcggcatcagccgaatgctcagccagagatccatggggaagaggacgagcaaccgtggtgatgatcgggaggcgcagttgacaattgatccctaa</cdnaseq>

Protein Sequence

<aaseq>MEPPSGIRASAWSFFKFLPFFLGLLLLGIIKGALLFPWAWLIMM IGISALVLGLWPMHVIWTYYCIIRSKLVGPVVKLLLLVAASVILVLWLIVGIVGSVLI GVVYGFLAPVMATFDAVGEGKERPLYHCFVDGTWSTITGSCTVVRDLKDLLLHSYFSI MDDLRFHAPPGGEPYEIRVLDIPGALFAAACGFLVDGIMFTLIAFYKFPVMLFKGWKR LIEDLVGREGPFLETACVPFAGLAILLWPFAVFGAFLASIISSIPLGAFAAVVVYQES SLIMGLNYVISSVAIFDEYTNDVLDMAPGSCFPRFKYRKNEASTEGGSLSRPASFKDK QDGKKAPSRVTSFKGSFDEFNPFKLLDHLFEECKHRGEVLVAEGVITPKDIEETKSGK IGIGVLNVGLPAYVILHALIRSAKANSDGLILSDGSEITSDNRPKNTIFDWFFDPLMV IKEQIKAQNFTEEEEAYLKKRVLLTSDPKRLKEVVPHLPSSLNERKQAEIDALSRRLQ GITRSISRYPTAKRRFDDLVRSLSEELERTMGGSQSGSVSQMQKLRSGISRMLSQRSM GKRTSNRGDDREAQLTIDP</aaseq>

Gene Sequence

<dnaseqindica>612..705#1297..1405#1509..1701#1822..1958#2294..2582#2681..2787#2864..3008#3233..3431#3511..3754#3834..4074#agcttcgcgctgcctcgctgccgctgccgccgccgccgcgacccccacttctccgccagcaaagcgagctgctctgctccggttgccttcctccctaagcctgctctgctcgcgggcaccagattcggcgggcagcgaagcagacagctctctccgcccctgccttttctgtttcttgattagtataatatcaattaggaggcttttctttgctttcgatgggtgtgtgcgtgcgtgttggtaattttgattagttagcggcccatcctagccacgcgacgccgatctccagggcgcggctgttcttgccaaaccgcaaccaccactagcccccacttcgtccggttttaattttcaattatcttggcagttcgtgagcctttcgttttcttggggctccagggtttcgcgtctctctctggtttggactttgagacttgacgacgctctggtgagcggtgagtttcttggaaaattcttgctgcttgactgcttttttttttctatccgtttcctggagagattttcggtttactcattgttgattttgccgtgattgggttgggcagggttgatcggcgttgaggaagagattgggcggaaggttgtcgatggagccgccgtctgggattcgggcatctgcctggagcttcttcaagttcctgcctttcttccttggccttctcctcctggggatcatcaaaggtgaagagaaaacactggttgtattggttcatcttgtttggttgcttctgtttgtttgtgctaagaaagtattgtcatgagagtattagaggagaacttcacatagcagtgtctctgtaattatgtactgtggaattgtggcgcatttgttagtttttgatcagaatggcaagccgaagatctctctgggtgacccatttgcattttccttgcattagggtagtttggttgagtgggttggaattggaatcgctcagaggatgtcattgttttcctttttccttcttttttggctgattagttaaagttttttggattttagcctctctttttttttttgttctggttcagctggagttcgtcacttgcacttcatttagactgattgcaactgtccattgcaaaaggggaattgaagtacggtactaggtatctgtaaattccagaatgcaaaatcgttgtacgaacttaaatgccttttcagcatatgatcaaatactacttagtaatttttgccgtcccatgttcccatttttgaacctcagattctgacttgcaattcctccctacgtgttaattttgcctatgcaggtgctttgctcttcccatgggcatggcttatcatgatgatcggaatctctgcactcgttcttggcttatggcctatgcatgtgatctggacatactactgcatcatcaggtttaggattcacaactcagtacagatccgttccaaagagaattaccacataattatgaaaactgtacttatatatgcttgtcatctttttttcggaaagcagatccaagcttgtcgggcctgttgtaaagctgcttcttcttgtcgccgcatctgtgattttagtcttatggctcattgtcgggatcgtgggaagtgtcctaattggtgtggtgtatggttttctcgctccagtaatggccacatttgatgcagttggagaaggaaaagaaagaccactataccactgttttgtggtacattttccttttcgttgatttactctggcattttccttgttcttacttctaaagatttattccttcgaaaaaataacttctcaagttctacatcggtatatgcaacttgaaatgcaggatggaacatggagtactataacaggaagctgtacagtagttagggacctgaaagatttattattgcattcatatttttcaataatggatgaccttcgttttcatgcacctcctggaggagagccatatgaaataaggtttgttttctcctttcaaggttgcattttattgtcaggacatggaatcttcatctaagattctaacagtgcaaccttctcatgaattcagttattgtttttgctatctgggacctttgttcttacatgcatgaataattaaggtttgcaatagattttgaactgaaaccttaatttacaatgatatgtgggagttttccctcataaatttaacttcaccacgctacaatttcaaaattggtgctgtttatatttatttctgaatgcccgccttgatcttattttcttgaagaattccatataacaaagtcaaataatacttctacatctcccagagtgcttgacattcctggtgcattattcgctgctgcgtgtggatttctagtggatggaataatgttcacactaattgccttctacaagttccctgtgatgcttttcaaaggatggaagcggctgatcgaagacttagtcggcagggaaggacctttcctggagacagcttgtgtgccatttgctggtcttgctattcttctgtggccatttgctgtttttggagcttttctagcctccatcatctccagtattcctttaggtgcttttgctgctgttgtggtttatcaggtagccacttgctgaccgtgaatatttttttttcacttctagtataaattgatctgtctgaggtgaattcatgaagcctaaccatgtctctgtgccaggaatcctcgcttatcatgggactaaattatgtaatatcatcagtggccatctttgatgaatatacaaatgatgtgcttgacatggcaccaggatcctgctttcccaggtatgcacgatgctctttatgttttgaatcctccttgtctgaatgatacaagctaactctaacattctattactaggtttaaataccggaaaaatgaagcttcgacagagggtggttcattatcaaggcctgcctcatttaaggacaagcaagacgggaagaaagctccatcacgtgttacatcgtttaagggcagctttgatgagttcaatccatttaaggtgatctcttctaggctaaaattggcagattttgttgaatcattctactatattaggaggggcaacacctgttcagacttctagagattacactatcctgctcgatcgtcccattttcacttctcatttgcacatcccatgaaagtctgctttagactcgtgcaaatctgtctgattgattttttgaatgaaaaaaaaaatatctgattgatattatgatttagttgctagatcacctgtttgaggagtgtaagcaccgtggagaggttctggttgctgaaggagtgataacaccaaaagacattgaagaaacaaagtcaggaaaaatcgggattggagtacttaatgttggtttgccggcatatgttattcttcacgcactcattagatctgcaaaagctaattctgatggcctaattttaagtaagtaataaaatagtttttcatattcgaaaacaggtgctatgactttgcttgactcaccttttgaaatattatgcaggtgatggttctgaaataacatctgataacaggcctaagaacacaatctttgattggttctttgatcctctgatggtcatcaaagagcaaataaaagcccagaattttacagaagaggaagaagcatacctcaagaagcgagtgctgctgaccagtgatccgaagcgcctcaaagaggttgttcctcatctgccatcatcactgaatgagcgaaaacaagctgaaatcgacgcactttcccggaggtacttctgttcatcacccttcctgttttttaccaactaaagttcttttttttctaatctgtttttaatcctatgcaagattgcaaggaatcacaaggtcgatatcaaggtacccaacggccaagcgtcgtttcgacgaccttgtcagatcactctcggaagagctcgagaggacaatgggtggcagccaatctggcagtgtgtcccagatgcagaaactgagaagcggcatcagccgaatgctcagccagagatccatggggaagaggacgagcaaccgtggtgatgatcgggaggcgcagttgacaattgatccctaacatctccagaaagttcagacagaatttcttcgtcgtctttctagagctactttagctgtcttgatttgtacagaactgtttagaccggtgtatgaactaattctaaccactcttgaatgaaatggatgttgcaagattctgtgtttttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0597800, RefSeq:Os02g0597800