Difference between revisions of "Os02g0605400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0605400| Description = C2 calcium/lipid-binding region, CaLB domain containing protein| Version = NM_001053905.1 GI:115447180 GeneID:4329917...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0605400|
 
GeneName = Os02g0605400|

Revision as of 19:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0605400

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001053905.1 GI:115447180 GeneID:4329917

Length

5085 bp

Definition

Oryza sativa Japonica Group Os02g0605400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24578298..24583382

Sequence Coding Region

24578298..24578594,24578673..24578729,24578812..24578909,24579033..24579108,24579784..24579813
,24580301..24580429,24580545..24580591,24580945..24580999,24581407..24581506
,24582036..24582142,24582228..24582374,24582700..24582846,24582941..24582994
,24583341..24583382

Expression

GEO Profiles:Os02g0605400

Genome Context

<gbrowseImage1> name=NC_008395:24578298..24583382 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24578298..24583382 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggctgcggggctcagctcgtggatgcggggttttctcctgccgtcgctgtgggaggcggaggtcgccgtctccgcggccgcgctgctcgtcgcggcactgctcctcctcttcctcgaccaggcggtccagtccagcaccaagtccccggcttcctcctcgtcgccgccgccctctcctaccactacggcagccgcgagctgccgccgagacggtggttgtggtggctgcggctgccggcgccggcgggcgaaggggaagccagcggccgctgaacttggaggcaccagcaaggttgctcttccagatggtagccctcactctcggggcagaaccagctatgtgatcaagctggagctgctctgtgccaagtacctcatcggcgccaacttgaacgggagctccgatccttacgccgtcatctcctgcggcgagcagagacgcttcagttccatggtgcctagctcaagaaacccgttgtggggggaggagttcaacttcctggttagagagctcccagttgagttttgcactgctcctgtcaatgattcaaaagtaaccataacaatgtacgactgggacacagtgtgcaagtgcaaagttattggatctgtaactgtagccgttctcggtgaagacgaagcaggagctacttggttcgacctggacagtaaatctggtcagatctgcctgcgttttagctcagctaaagtatttctgacttctgagagattgttcaccaaagttattcttgtgctctggagaggtctttcctgcaccatgggcataaaaagaagtcagcattcccttatcaacccagcaattactatttttcttcgtaccggttcaggtggtcatggaacacccccttcatgcagtcaaaatggaagaatcaggtacaaattcacatcattctggaatagaaaccgcacatttcgggccctggagaatgctctgcagagttacagggcaaccttagaagctgaaaaacaggtcagaatgcattcacttcaacaaagaagaagcagcgatgtcatctgtagcaaaatagatgacctaaagacagcagaaagaagcattgaacaagcaaaagcattccaacctttcatcaatgaacatgttcttgtagatgcaaccagtcttagcaagtggtacccctcagatgagtatggcggcaagatccgcgaagtgatgttcaggtctctatgccacagtcctttatgtcccccagatactgcagtgacagaatggcaacgtgcttctttctcaaagaacaaaacaaatctgatctatgagacaaagcatcaggcacatgatgttccatttggttcttactttgaggtggcatctaagaacaacctccagttcaacatgtcaagttga</cdnaseq>

Protein Sequence

<aaseq>MEAAGLSSWMRGFLLPSLWEAEVAVSAAALLVAALLLLFLDQAV QSSTKSPASSSSPPPSPTTTAAASCRRDGGCGGCGCRRRRAKGKPAAAELGGTSKVAL PDGSPHSRGRTSYVIKLELLCAKYLIGANLNGSSDPYAVISCGEQRRFSSMVPSSRNP LWGEEFNFLVRELPVEFCTAPVNDSKVTITMYDWDTVCKCKVIGSVTVAVLGEDEAGA TWFDLDSKSGQICLRFSSAKVFLTSERLFTKVILVLWRGLSCTMGIKRSQHSLINPAI TIFLRTGSGGHGTPPSCSQNGRIRYKFTSFWNRNRTFRALENALQSYRATLEAEKQVR MHSLQQRRSSDVICSKIDDLKTAERSIEQAKAFQPFINEHVLVDATSLSKWYPSDEYG GKIREVMFRSLCHSPLCPPDTAVTEWQRASFSKNKTNLIYETKHQAHDVPFGSYFEVA SKNNLQFNMSS</aaseq>

Gene Sequence

<dnaseqindica>1..297#376..432#515..612#736..811#1487..1516#2004..2132#2248..2294#2648..2702#3110..3209#3739..3845#3931..4077#4403..4549#4644..4697#5044..5085#atggaggctgcggggctcagctcgtggatgcggggttttctcctgccgtcgctgtgggaggcggaggtcgccgtctccgcggccgcgctgctcgtcgcggcactgctcctcctcttcctcgaccaggcggtccagtccagcaccaagtccccggcttcctcctcgtcgccgccgccctctcctaccactacggcagccgcgagctgccgccgagacggtggttgtggtggctgcggctgccggcgccggcgggcgaaggggaagccagcggccgctgaacttggaggcaccagcaaggtgagccacattatatttgtttgcattgcacatttgcacttccttcttaattatcagaacaatttgtttgcattgcaggttgctcttccagatggtagccctcactctcggggcagaaccagctatgtgatcaaggtacttgcttatattatctgcaaggttaattgactccatgtctgaattgtttccgtgtgcctttttctgtttttgcaatcagctggagctgctctgtgccaagtacctcatcggcgccaacttgaacgggagctccgatccttacgccgtcatctcctgcggcgagcagagacgcttcaggtcacctgccattacaacttctctgcgctatgcctcatcttcacacagtattttgttctaatataatcatgtctgagctaaaaaatcattctaaaaagcaagcatggcctaatgcgtttgcagttccatggtgcctagctcaagaaacccgttgtggggggaggagttcaacttcctggttagagagctcccagttgaggtaccaacagtttgccatgttgtgaattcgaatttctgatatgtttctcaattgcattccaagtttctgtgtcacaagtgaaaaggtgatgcagtgtccatcattacaattccattatacaccaagaaactctaatcatagtgtctcaggttgcccccaaaaagataaaatagttaatccagctttaatccagtctgtttttctcatcttaagcgtgcgagaaaagcaaaaacgtatgagtgtgatggattcagattagacaaatgctatgtgaaaaacggcacagggtgtatgccagccttggtccctgatacaaagctatacttttgcactattgtactagtactacttttcatccttgctgattagatatttggatccttcggccaagcggtatatattgctggctgcctggcttgcagctgagctttcagaattgtagcagaaagtcgcatggtaaaattctcaaagtcactttgctttgtcataatcatgtggcagatttcttcccgtcagaaaaatggtggtccaaataacacagcataattggcgaccagctgagtagcagaaattatgagtagcaagcagaacaataaattatacttgctggtgcatatgctttgcattaccttgcacgtgcagcatcagctagcttctctaatgtgacatttgcagttttgcactgctcctgtcaatgattcaaaagtaaggtttagcctagaaaaacattgtactacaaaagaatggaaaggccgagttcaataaaagtttccattatctaaaataaaaggatggaaattaagtactccctccgtcccaaaatataacaacttttagcccttagaatttatcccaaaatataacaatttaacaacttctccaaacattctcttctcaaccaatcacaaccctccatcattcacttttcccacctacctccagtactcatccaatcataatcctccaccattcacttctacctactttcttaataaccgtggccaactctaaaacgtcttatattttgggacggatggagtagtaaaaatctgagtagatacaattcccccataatatttcttacccaacagctgtgactgatacttacaatgaaaccgttcaaaagatgagctccttttaacatttgatgccgaactttggttgcctgcctgatatactcttctgtatataggtaaccataacaatgtacgactgggacacagtgtgcaagtgcaaagttattggatctgtaactgtagccgttctcggtgaagacgaagcaggagctacttggttcgacctggacagtaaatctggtcaggtaaagtgtaaaattgatgaataagtgatattgtctaacttaccactattgctgtacttcaaatattcaatgaacttttaaggatgtatttacaattaacgaaatatggttgcagatctgcctgcgttttagctcagctaaagtatttctgacttctgagaggtaatcttaatcaggaagagggggggggggagggggggagggggggagggggaagcagcatacctgatgataagcaatcttcttattttcctttttcccctctttctccagtctgtttgaccaatgtgttggaatcgagtccgagagaacgatgatgctaagcaagcaatacctgccaataactcaagatagtggccttctacaagctatatttgaacttcctcatgatgaagtattaattcctgatattacaattgcttatacagtatttcatactcatcagaattgactcttcctcatgatgattcatgtttcttatgctgaaacattccatctgtctcttgtacttccagattgttcaccaaagttattcttgtgctctggagaggtctttcctgcaccatgggcgtatgtacatctccttatggcatctgtgcttccactccaatgtattctccaaacagttgaatgtaaagtacatggatctgaagaaacatgcattgcttaattattttacttgaagctgaacattgttatttatgctcctttctagttatctccatggtaaatcaataacagcatggaaatattgttaagtaaatttacacacttattatcccttagatgattttcttgagcttattacttttattttgagaacttccagttcgctttctaagacctgcaattttttaggtgattattccattacaagatatagatgaggtatgcaacctacgaagctctttccgtggacttagtatttgctttctatcagctgagatagtagacatccacatcactttatcccgcagataaaaagaagtcagcattcccttatcaacccagcaattactatttttcttcgtaccggttcaggtggtcatggaacacccccttcatgcagtcaaaatggtaatttattggctcaatctcataatttttaaaacgttggattcaagaaaatgcctaaattggaaaagtagtttaatatcatagaatcgaattaccacatttgtgcaagtttgaactccagagagcttgaactgtatcattttcaagttgagttactctaaaagaagtggcttttaccagtaaaagttgcgctagcaaagaaaatcataaacctaatagatactccctctatcccaaaatataacaacttttagccctcaggatttatcccaaaatataacaacttctccatcaacattctcttcctaaccaatcacaaccctccaccattcacttttcccacctacctccactactcatccaatcacaaccctccactattcacttctacctactttcttaataaccgtgtccaactctaaaacttcttatattctgggacggagggagtatacaatttagattaactattcatgttagaaatctatgtagagattttctgttgaaaatacctggcttgatttctcaggaagaatcaggtacaaattcacatcattctggaatagaaaccgcacatttcgggccctggagaatgctctgcagagttacagggcaaccttagaagctgaaaaacaggtatccagaaattattctagcttgaatattttctgttgattttgcagaaattatctgagcatctgtaatgctttcctacaaacaggtcagaatgcattcacttcaacaaagaagaagcagcgatgtcatctgtagcaaaatagatgacctaaagacagcagaaagaagcattgaacaagcaaaagcattccaacctttcatcaatgaacatgttcttgtagatgcaaccagtgtgagcatcccaagttgttttcctacatattcaatgcacaatttgttatccctttcccccctaattttcaacatgacattgtccatcagaaaaccttccctggcacatctgagaagttcttcagtatcatattaggtgacaattcaatgtttttccagcagtatcgacatggaagaaaagatacagatttaaaggttcctattttgtcagtagcaccaatcgcatgttctatttgctatgtcaatccttggatgtgttaatctagtgactggtagcataaccaacatttttttaatttatagtgttttgatttttcattctctagcttagcaagtggtacccctcagatgagtatggcggcaagatccgcgaagtgatgttcaggtctctatgccacagtcctttatgtcccccagatactgcagtgacagaatggcaacgtgcttctttctcaaagaacaaaacaaatctggtaagattaaattagtaacagataggtccactgtgaatcaggttttcttgatttttcttctttaatgaaattatgacttactatctcatttcagatctatgagacaaagcatcaggcacatgatgttccatttggttcttactttgaggtatttgccaccattattgacaacacgaacaaatagaaatagaaaatttgaaatattagaaagattgtttggtcaggaaagtagtaattttgtgagaacttgttacttgcttctccgtttctatgtcttttcagcaatcttttctattgtctaagaagttaatatagtaaagtactcattttgcacaatagatactaatgctaatgaagaggagaccaagtggcccgtctttaaccatttctttctctgtataaaaccacaaaatattcactcttcccagtaagatgtaattatttttcctgagagaggaattgccattgataccttggtcatagatccactgcaggtggcatctaagaacaacctccagttcaacatgtcaagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0605400, RefSeq:Os02g0605400