Difference between revisions of "Os02g0610600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0610600| Description = Similar to 9G8-like SR protein (RSZp22 splicing factor)| Version = NM_001053935.1 GI:115447240 GeneID:4329951| Lengt...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0610600|
 
GeneName = Os02g0610600|

Revision as of 19:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0610600

Description

Similar to 9G8-like SR protein (RSZp22 splicing factor)

Version

NM_001053935.1 GI:115447240 GeneID:4329951

Length

3851 bp

Definition

Oryza sativa Japonica Group Os02g0610600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24850365..24854215

Sequence Coding Region

24850679..24850844,24851497..24851755,24852644..24852732,24853799..24853887

Expression

GEO Profiles:Os02g0610600

Genome Context

<gbrowseImage1> name=NC_008395:24850365..24854215 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24850365..24854215 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgaggacgagttccgcgtgtttggggttctgaggagtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatggcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgttccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgcacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgcagccgtagccggagtccaaggtaccgcggtcgtagtcgcagccgcagcccaagataccggaggagcccaagctatggtagaagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccaccaccagctcgtgcacgaagctacagccgatcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgcgaggagtccccctacgcaaataacgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFID FDDRRDAEDAIRDLDGKNGWRVELSTKAGSGRGRDRSGGSDMKCYECGEPGHFARECR LRIGSGGLGSGRRRSRSRSRSPRYRGRSRSRSPRYRRSPSYGRSPRDRSPKRRSYSRS PPPARARSYSRSPPPPRERSYSRSPAQPANREESPYANNA</aaseq>

Gene Sequence

<dnaseqindica>3372..3537#2461..2719#1484..1572#329..417#cttccgctcgctcgacggctcgagcttaaaaccctagagccgctcctcctcctcctcctcgcctaccccgaaacccaaatcccccccaaggcggacgcgcccgcaaaggcaagtactctccagatcccccgctgcttctgcttttgcgccccccttttccggtcggaaacgcgaggaatttccggatttacttcctctttttttttttgtgtgtgtgtgattgtgttcttctacttttggtttggtagagattggtggtggtgcttgttgctttcctcagcgtggtgggagtgatttgtgttgaatacctgcagggtcgagcgcgctcatggctcgcgtgtacgtggggaacctggatccgcgcgtgacggcgcgggagatcgaggacgagttccgcgtgtttggggttctgaggaggtgtgagattctgctgactctgagctaagaatcactatatatatatattttactccctgtgttgcgtatacttgtttaatgtgcctgcttgttcgtttgacttgcttagccacttgtatggatgttagtcaagcgtgtgattttgaaattggaatgctgcagctttacaatttaagttttaaatggtgggtattagctctcaaattagtaatgatagcaggggatgattgtcttgtactgtgcttttattggggtaaaattagttcattgacatatgtgaggtggagagctcggtgcaatgcaattttgctggatataattaattcctttttatataaacaagtaatctgccttacttggtcacttattgttgggcacctaagtgctctgttctactggtgggattgggaaaatatatctaatttgagtattaggatcggtctggtttgtatgtcatgcctcatactgtgggatgcaacgtatatgctagaaagtatcaggtgaacttgaagagtaattgagtttgcagtgaacaataagatatgaagaggcagatcaagtaaagttatgatgtttaacaatgtgacgcagcgttaactgtgaagtatatgaaataaagtcatgttatctcttggtctgtcagtgtacgcctgaattcctttcttaatagactggcgatatctcaatattctgaatttcttgtctgctggtctaaagagtttatcacttactcattagttgaaccactcagtggcatgtttgtatctgcatgccaaagggttatgttgaaggctgttgatgttcacatggagtagtcatggtttgtatgccataggtttttctttgtgtgtgtgtgtgtattagtttctttattgctgatttctgtcacaacattaaagatgatttttgtatcgacaaccatggaagagatatttaggttgttactcaatactaagaatggtaatgaattcatagtctatatggagcagtaatgatttcttaattatgtctgcaaatgagattatctgattcttccactttcaactgagttgtttcttctatgcagtgtatgggttgctagaaaaccaccaggttttgcctttattgactttgatgaccgcagggatgcagaagatgcaattcgtgatttagatggtaataagcgtagatatttgtctttgtagttcatgcaagatagtttcatgttatgcacttctctaatgagttatctatttcaacttctggcattacatagttttgccattaaaatggctattacattatttctttagtcaagtgagtccccatcaatttttatcttggttatagtataaataactctgtctgaatcatgattcaagcaacttataaatttaatttggataaacaatagacactgaatttatagataaaatatgttgtgtccaaacatatagttttagcttaccatcatgaatgcatcttgctatctcctgtaaactgttcggtcttagaaggacgttttgaaaataatagacaggggcaaatccatagtttcataaattctgaatctcaattcctgttcactagtagaattctaaattgaacctttacatgatatcaactaagaggtccgtcttttaacctaaccgggccttgttatttatttctagagtggtgatattagtaaatcgaggtcaaaatttgacactctacatttatattgatctgatatattgtgatatacatatattgttgcaagcacattaggcccatgttgttccaagttaagaaacttgatagatattggtacatgcctactttcttttttctctgtgacttcagttgtgcatgtagctttgtacattaaaattgtgatatcatcatatgatttgttacttgaccaagatattcttttaccctttcaattgatgtgttgtatttttccaacctacttctatgctttagctattacttaacatattattatagggttactcacaaatttaaacagtccatgaattccgcttacaatcatcctgctgatatgtgatgtgcttataggcaagaatggatggagggttgagctgtcaaccaaagctggtagtggtcgtggccgagatcgttccggtggttctgacatgaagtgctatgaatgtggcgaacctggtcattttgcacgtgaatgccgcttacggattggttctggaggccttggcagtggaagacgccgcagccgcagccgtagccggagtccaaggtaccgcggtcgtagtcgcagccgcagcccaagataccggaggagcccaagctatggtagaaggtaatgtaaagttattgtcttcaaacaggctctgtagatatgagtaatgacaaaatgatatcttggcatccctagattctttcttgttggccagccaaatcgttgttacatttgcagttttatataccaacttatatagctgcgctaccccatattcaagattgtgaaaatggagaaactaaaaggtgtgcttacataagaagcttgaagtacaagatatataagtattccaataaacttgtaactttctccctcactaaaatatttgctcaatggcactgatcagctttgtccgcacttacatttgggttcaatttcaaattcagggctatgttactaagatgcatatactgttaccatgatcactaataactattaagataactagtgtttattttttttagtttgttatttgttactgcattatagcatattgtggattgatcatacagataagatgacagtagattaaggcaaacatggtaacaactcggttgaaggattttgtagttgagattgtctcattttacttgaagcggaatatcatgctactgttgttgtgttgccacatacatgcccttaagcaactattttctgtgataaccgcaagtttgtttgtttttaaaacctttctttgttttaggagttacagcccacgggatcgttctccaaagaggcgcagctacagcaggtcgccaccaccagctcgtgcacgaagctacagccgatcacctccacctcctcgtgagcgaagctacagcagatcaccagcacagccagccaaccgcgaggagtccccctacgcaaataacgcgtaacccgcctagttccaatttgctggaaatgttaggggggctcggtgtgtttttgtaagcgcttgtgttatggagtcttgaaaagctatagggattgagtatgttcttcggaagcatttgtgtacccttcgggaaaaaccccgccgctgctgatacaattgttgaagcaggagcctagcgttttggtcgactgtatgactttgagaccccatgtagtccgtaagactaagttttgtaccattagatttttcacattgctggaatatttgtgctaaatactagtattattaattaatgtcttttgtaggtgctgctct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0610600, RefSeq:Os02g0610600