Difference between revisions of "Os02g0636500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0636500| Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein| Version = NM_001186162.1 GI:297721456 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0636500|
 
GeneName = Os02g0636500|

Revision as of 19:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0636500

Description

RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein

Version

NM_001186162.1 GI:297721456 GeneID:9269512

Length

3923 bp

Definition

Oryza sativa Japonica Group Os02g0636500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26405193..26409115

Sequence Coding Region

26405193..26405429,26406031..26407302,26407464..26407639,26408923..26409115

Expression

GEO Profiles:Os02g0636500

Genome Context

<gbrowseImage1> name=NC_008395:26405193..26409115 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26405193..26409115 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaacatcttttcctcctccttctgccgcttatcatgatcttcctcccatgcatcgcttgcgatgcaccccaactggtgtatgatgctggaggcgaggagctaagtagcgaacacaaatactacatcttcctggtaaataataggtctggtgggggtgccctctccatcatctatgctggcaatacacattcaaattcatcttttcaaatccaacaacaaacatttgaaagcaatcaaaaggagttaaaggcagcagcggccaagtacaatccactcttcaggtcaggcataatgccaactggtgtgaatgatacaactattgtgcttataccaaagattgatcagccgatggagctccgagacgagaagaacaagaatcagggaaaggctgcctgtgcttacaaactggatttgtcgaaggcttacgaccgcgtggactggcgatttttggagcaggctatgtataaattgggatttgctcaccgatgggttagttggattatgacttgcataacctcggtgagatactcggtcaaatttaatggatcccttttgaatacatttgctcagtcgcgtggtttgcgtcagggcgacccgctttcaccgttcctattcttgtttgttgcggatggcatgtccctacttctagaggagaaagttgctcagggtgagctatcaccggtgtatgtgtgccgccgagctccttgtatttcgcatttgctgtttgcagatgatacattgcttttcttcaaagcaaacagattacaagcccgggtgattcacggcattttgggtgattatgctgcagccactggacagttgattaatccggcaaaatgttcgatcatgtttggagatgtctctccgacagagatcaaggatgacatcaggaatatcctgcaaatcggtagtaatgcttttgaggacagatatctgggtttcccaactccggaaggtcgaatgaataaaggtaaattccagccgttgcatgacaaattgtggaagagactaatccaatggggggagaattatttgtcggtgggaggtaaggaaattcttattaaagcggtcattcaagctattcctatttacgtgatgggtttgtttaagcttcccgactctgtctgcgacgacttgacaaatcttacccgcaatttctggtggggagctgggaaaggagaaagaaagacccattggaaagcttgggatcatctaacccgacctaaactttgtggtggcctgggtttcagagactatcggttgttcaatcaagccctcttagctagacaagcctggcgtttaattcagtcaccggagagtttgtgtgcacgggtgctaaaagcgaaatattatccaaatggctctttggtggatacatgttttgcgagcagtgcctcccccggatggaggggaattgaatatggccttaaattgttgaagaaaggaattatttggagaattggaaatggtcgatctatccgtgtctggagagacccatgggtgcctcgcaattttaccagaaggccaatcactgggaaacgtaattgcagaattaagtgggtttctgaacttttgacagaaaatggcgcttgggatgctataaaggtgaaccaaaatttcctccccattgatgctgagcatccccaggttaatcagatgaagggcaaacatgtgatcaattactggggtttgaagaaggatagtcagcaaagactgtacaatggaagcactaccgactgggagaagccgcagcaaggttggatgaaggttaatgttgatgggtcatatgatgcacaaacggggactggaggtatcgaagtggtgcttagggactcggaagtagggatggcaatcgggcgcgacgggcacgggtag</cdnaseq>

Protein Sequence

<aaseq>MKHLFLLLLPLIMIFLPCIACDAPQLVYDAGGEELSSEHKYYIF LVNNRSGGGALSIIYAGNTHSNSSFQIQQQTFESNQKELKAAAAKYNPLFRSGIMPTG VNDTTIVLIPKIDQPMELRDEKNKNQGKAACAYKLDLSKAYDRVDWRFLEQAMYKLGF AHRWVSWIMTCITSVRYSVKFNGSLLNTFAQSRGLRQGDPLSPFLFLFVADGMSLLLE EKVAQGELSPVYVCRRAPCISHLLFADDTLLFFKANRLQARVIHGILGDYAAATGQLI NPAKCSIMFGDVSPTEIKDDIRNILQIGSNAFEDRYLGFPTPEGRMNKGKFQPLHDKL WKRLIQWGENYLSVGGKEILIKAVIQAIPIYVMGLFKLPDSVCDDLTNLTRNFWWGAG KGERKTHWKAWDHLTRPKLCGGLGFRDYRLFNQALLARQAWRLIQSPESLCARVLKAK YYPNGSLVDTCFASSASPGWRGIEYGLKLLKKGIIWRIGNGRSIRVWRDPWVPRNFTR RPITGKRNCRIKWVSELLTENGAWDAIKVNQNFLPIDAEHPQVNQMKGKHVINYWGLK KDSQQRLYNGSTTDWEKPQQGWMKVNVDGSYDAQTGTGGIEVVLRDSEVGMAIGRDGH G</aaseq>

Gene Sequence

<dnaseqindica>3687..3923#1814..3085#1477..1652#1..193#atgaaacatcttttcctcctccttctgccgcttatcatgatcttcctcccatgcatcgcttgcgatgcaccccaactggtgtatgatgctggaggcgaggagctaagtagcgaacacaaatactacatcttcctggtaaataataggtctggtgggggtgccctctccatcatctatgctggcaatacacattgtgagcattttgtgttccataggaccgatgaggctctctagggcgcaaaagtgagattcacatcattgcacaattcaacagtcagtgatgcagtccgcttgtcgaccgatgtccagattgactttgtggacatcatctggttgtgcaaccgcccctcgacatggtacatctctaatttccaactgaaattgttaccaatgccaccatcatcgtcaacatctaagttgcaatatgtcgtggccaacacaaatatagagcctaactacccatcatcggctaaagtgttccgcattgagaggtacagtgatgatgacaatatgacgtacaagctattgacgtgcattacccatgggaagccttgcaaatatctagggtttcaggtcttcggggataataaattcctagtggcaacggacgagccattagcagttcaaatcgtcaaggaatacacatgatttatgcaagtgcttatgcttatgttatattctagcatgtacttgtagtttatataatgtgcgccatataatctatttgtgatggatcaatcttaagctgttatttcttttgatgtgcgaaatgttgaaactttgtgactcttaagctgttattctatcaatgaataagggagaatagctactttagtccctaaagtttctctataggatcagtttagtccctaaccttttaaatggtccaaaaaaatccttaacctttgtcataaggcctagaatagtccttgggtccaccaaaatcatcatatggatatgccatgtcatcattcatgcaaaatctatgatgaattgtccaatttacccttacgtatatcatagaaaaataaatataagggtgaattagacataaccataggaaaaaaatacttctttttttcacccttttgaggtatatttttgctcttacaaataccatatattttttaaactttttccttttgttttttatttttctgtgcgtaagggtaaattggacaaatcatatagattttgcataggaaggtgacatggcatgtccatgtggcattttggtgggaccaaggactatattagcccacatgacaaatttaaaggacttgtttggacaatataaaagattactgactagaatgacccatgagcgaaactttagggaccatattagctattctcccaatgaataatatctttagaagttctaatttcaattactaatcatgaaaaatatatacaagtatgtcaatgcttttggctgtgaaaaaaatatattaatatattttaaattttggcaagcaaattcatcttttcaaatccaacaacaaacatttgaaagcaatcaaaaggagttaaaggcagcagcggccaagtacaatccactcttcaggtcaggcataatgccaactggtgtgaatgatacaactattgtgcttataccaaagattgatcagccgatggagctccgagacgaggtctgtgtaatgtaatctataaagtggtatcaaaatgcttggtaaatagattgagaccctttctagatgagctggtgtctggtaatcagagtgcttttgtcccaggacgcctgattaccgataatgctttattagcttttgaatgcttccactttattcagaagaacaagaatcagggaaaggctgcctgtgcttacaaactggatttgtcgaaggcttacgaccgcgtggactggcgatttttggagcaggctatgtataaattgggatttgctcaccgatgggttagttggattatgacttgcataacctcggtgagatactcggtcaaatttaatggatcccttttgaatacatttgctcagtcgcgtggtttgcgtcagggcgacccgctttcaccgttcctattcttgtttgttgcggatggcatgtccctacttctagaggagaaagttgctcagggtgagctatcaccggtgtatgtgtgccgccgagctccttgtatttcgcatttgctgtttgcagatgatacattgcttttcttcaaagcaaacagattacaagcccgggtgattcacggcattttgggtgattatgctgcagccactggacagttgattaatccggcaaaatgttcgatcatgtttggagatgtctctccgacagagatcaaggatgacatcaggaatatcctgcaaatcggtagtaatgcttttgaggacagatatctgggtttcccaactccggaaggtcgaatgaataaaggtaaattccagccgttgcatgacaaattgtggaagagactaatccaatggggggagaattatttgtcggtgggaggtaaggaaattcttattaaagcggtcattcaagctattcctatttacgtgatgggtttgtttaagcttcccgactctgtctgcgacgacttgacaaatcttacccgcaatttctggtggggagctgggaaaggagaaagaaagacccattggaaagcttgggatcatctaacccgacctaaactttgtggtggcctgggtttcagagactatcggttgttcaatcaagccctcttagctagacaagcctggcgtttaattcagtcaccggagagtttgtgtgcacgggtgctaaaagcgaaatattatccaaatggctctttggtggatacatgttttgcgagcagtgcctcccccggatggaggggaattgaatatggccttaaattgttgaagaaaggaattatttggagaattggaaatggtcgatctatccgtgtctggagagacccatgggtgcctcgcaattttaccagaaggccaatcactgggaaacgtaattgcagaattaagtgggtttctgaacttttgacagaaaatggcgcttgggatgctataaaggtgaaccaaaatttcctccccattgatgctgaggtaatcttacagatgctgatttcttctagagatgaggaggatttcattgcttggcattctgataaattcggaaggttttctgttagaagcgcatacaagttagcacagtcgttggagcaaatggaggagagagctagttcaagtgctgcatccacaactatcccttgtaacctaatttggaaatgtaatatccctcagaaggttaaaatctttgcatggaaggcagctactaactgtttagcaactatggagaataaaaagaaaaggaagatgtaatcttcagatatctgtgttatatgtggcagggagaaggaggatacaagacatgcgctcaccaggtgcccacttgctcgtgctcttttgcaggctttgtaggaggatcactgtttcatttccgacaatttagctcctactgattatggccattggttgtttgattgcctggagaacctggcggattcagggcgttctctgctcctgatggtgctgtggcggaactggtttagtcgtaatgaaatcatgcatgggaagtctgcacccacgattgaagcgtctaagaatttcctgctgagttatgtcaatactcttggaaatcaaacagcatccccaggttaatcagatgaagggcaaacatgtgatcaattactggggtttgaagaaggatagtcagcaaagactgtacaatggaagcactaccgactgggagaagccgcagcaaggttggatgaaggttaatgttgatgggtcatatgatgcacaaacggggactggaggtatcgaagtggtgcttagggactcggaagtagggatggcaatcgggcgcgacgggcacgggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0636500, RefSeq:Os02g0636500