Difference between revisions of "Os02g0661900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0661900| Description = Similar to Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0661900|
 
GeneName = Os02g0661900|

Revision as of 19:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0661900

Description

Similar to Vesicle-associated membrane protein-associated protein B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C) (VAP-B/VAP-C). Splice isoform 2

Version

NM_001054184.1 GI:115447738 GeneID:4330225

Length

2412 bp

Definition

Oryza sativa Japonica Group Os02g0661900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27686768..27689179

Sequence Coding Region

27687538..27687572,27687663..27687819,27687899..27687946,27688743..27688859

Expression

GEO Profiles:Os02g0661900

Genome Context

<gbrowseImage1> name=NC_008395:27686768..27689179 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27686768..27689179 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacaacgcagaaggacattcacagtgacatgtaaagaggcaggcaaggtggtcgaggagttcaagctgagggtggtctacatccctgccaatcctccctcccctgtgccagaggaagaagaggatgagattgattcccttgattcagatgtggaccatgaagtgcaaatgccatctacgttcgatgctgcatcaaggaagggatatacatctggatcgcaagcttcacatgacgaggatcttcttaagaagaaaaggtcatcatccgatgggggtttcacagctctgtttgtgccttttgtctttgcgttcttcgtcttcattggatacttaatggcgggaagcaatgtttag</cdnaseq>

Protein Sequence

<aaseq>MAQRRRTFTVTCKEAGKVVEEFKLRVVYIPANPPSPVPEEEEDE IDSLDSDVDHEVQMPSTFDAASRKGYTSGSQASHDEDLLKKKRSSSDGGFTALFVPFV FAFFVFIGYLMAGSNV</aaseq>

Gene Sequence

<dnaseqindica>771..805#896..1052#1132..1179#1976..2092#gtgtttgcttgtcgttgatgctttgcttcctggaggaggaaacgcccgcacacgccgccgaccacctctccgtttccttggatctttcagcttcctgttcctcacgagatcgagaaggggggaaaaagaaaacgtcggtttttagtctcgtttgcctcgatcctctcgttcttggttggtcggcgccatgagtaacaccctgcttcgaatctacccttccgagctgaagataccctgtgagtgcttcgacgacctgtcctttgttgttcttgctgtttcttgattgtttaggactgattcagatcgcctctgtttcgatgctctgatgagcagtcgagctcaagaggcagaattcggggatcctggagctcacgaataagaccgatcatcatgtagccttcaaggtgaacacaagttgacagttttttttttgtcagagttgctgtaacctgattaggttgagttgactgaatgtctgaatttcttgggtactggttgctcgatctgcaggtgaaaacgacgaaccctaggaagtactcggtgagaccaaccaccggaatcgttctgcccagagggtcttgcggaatcacaagttcgtcttgcttcctctgctgctgtacattgcccaactgatcagttcatcgtgtttataaacgcattgctgttcttgctctgaaaaatcgttgcagtatctatgcaaccgccgaaagagatccctacggattataactgcaaggacaagtttctcatccaaagcgtcgtggtagaggatggcacaacgcagaaggacattcacagtgacatggtaaaatcctgcagtctcaatcgagttcatagatgctgattgatttatgagtgatgtactaaatgttaaatgttgcggtttgtagttcagtaaagaggcaggcaaggtggtcgaggagttcaagctgagggtggtctacatccctgccaatcctccctcccctgtgccagaggaagaagaggatgagattgattcccttgattcagatgtggaccatgaagtgcaaatgccatctacgttcgatgctgttagtactgacattgttgtttatatcaaaataacaatgatgatatgcttgttcctaatgataatttatttatgttcaggcatcaaggaagggatatacatctggatcgcaagcttcacatgacgaggttattatctttaagcattgctcgttggcagaatattccttagagcttactattgaactagacattaaagatcataaacacgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaacatcaatataaatgtgagaaatgctagatatatgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtagtagtttgttgatttgttcagtataggaattctactgttctaaacaactaacacccagcattttaattgcattgctaacattcttgattgtttcgtggttctttagggcgtctctttgaccaaagctgtattgagtaaatatgtagatgaaaaccagaagcttcaacaagaactggtatggattttctttagataagaatttggagaaaattgatactttcaatgttttaaaaaagaactgaccgtttaattcgcttcaacttctccataattgaataattgagtgattcgtatgaaattattttttcttgctacctttaatgaggttcatatcatgatatttgttacgagacattgctccctttcgatagttcttttttacttaaccttttttgcatacaacatatcgtaaatttacaacatctgcgtgcaaaagcaccagatccaccaaaagaaaagagaagcaagactagggcagatcaattacttaaccccaagttgatctattgcaggatcttcttaagaagaaaaggtcatcatccgatgggggtttcacagctctgtttgtgccttttgtctttgcgttcttcgtcttcattggatacttaatggcgggaagcaatgtttagccagaatagctgcaaaacatacgcatcgttttgcagaattttgtccctctggctgatcaattctttctgtttctcttggtagaaatatatttcttcattataggtggttgtcttccgttcttgtgaagtataatatacctcttaaagaatgggagagaaccattcattgtagatagacaaataggcgttctatctctgaattgttcatatataataaacctctggttcattatacacacacgtttgcttgtaaatgtggttgagtgtaaatttgacctgcagtatggtcctgggtgagttccagaatcctttcacagagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0661900, RefSeq:Os02g0661900