Difference between revisions of "Os02g0736300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0736300| Description = Membrane attack complex component/perforin/complement C9 family protein| Version = NM_001054587.1 GI:115448544 GeneID...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0736300|
 
GeneName = Os02g0736300|

Revision as of 19:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0736300

Description

Membrane attack complex component/perforin/complement C9 family protein

Version

NM_001054587.1 GI:115448544 GeneID:4330656

Length

6950 bp

Definition

Oryza sativa Japonica Group Os02g0736300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31623551..31630500

Sequence Coding Region

31623774..31624449,31625237..31625301,31625408..31625577,31625681..31625864,31626904..31626987
,31627108..31627306,31628568..31628809,31630179..31630421

Expression

GEO Profiles:Os02g0736300

Genome Context

<gbrowseImage1> name=NC_008395:31623551..31630500 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31623551..31630500 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgtggcggcggccgagaaggcggtgaggtgcctcggccgcggcttcgacatggccggcgacctgaggctcaagtactgcaagggcggcggcgccggctgcctggtcgagaggcgcggcgagacgacgccgctcaccgtgccgggagtcggggtgatcgccgacgtgccggccgacgtgaggtgcgacaagggcgaccgcgtccggttcaagtccgacgtgctcgagttcaacaagatgtcggagctgttcaaccagaggagttcggtggaagggaagatcccgtcggggcagttcaacgcgtcattcgacctggacagcgggtcgtgggcccacgacgcgccgcacaccaggtgcctcgctatggacgggtacttcatctccctctttgacctccgtctcgaccaccgccacctcgccctcgatgcaggtgtcctcgccgacgtgccacccgcctgggacccctctgccatcgcaagattcatcgagaagtatgggacgcatgtgatcgtggggctgagcatgggcggccaggacgtcgtctacgtgaagcaggataagtcgtcttctctgtcgccgtcggagatcaaggagcatcttgacaggctcggcgatcagctcttcaccgggacatgcgccatgccacctctgcactgcaggtccaaggacaagttcaagataccggaggccttcaacgtgttcgatgcacaagtagctcagcagaggcttcacgggatcaccactcttgtatcaagcaaggagggtgtgacggtgatatactccaagaggggagggaacacgacggtgagcagccactcggagtggctcctgaccgtgccggcgatgcccgacgtgatcaacgtcaagctcgtccccatcacctccctcatcaggggcgtgcctggcactggcttcctctctcacgccatcaacctctacctcagatataagcctcctgtcgctgacctgaggtacttcctggatttccagcatcactgcgtgtgggccccggtgctcggcgagctgcctctgggcccttgctcacaccggcaaggctccagcccggcgctgcatttcagcctgctgggctccaagctctatgtcagctcaactgaggtggttgttccgaagctgccggttactggcatgaggctgcatctagagggcaagaaaaacaaccggctgggcatccacctgcagcacctgtcgacgacgccgacgttcgtcgccgccgccagggccgacaagccgccggtgtggcgtggcacggaggcggtcaccgacgaccggtactacgagccggtgcagtggcggatgctggcgcgcgtctgcaccgcgccggtgaagtacgacccgcggtggtgcgccggcgaccgccgccgccgccccgccgcctgcgtcgtcgccggcgcgcagctccacgtcgtggcgcacgacgccgccaacaacgtgctccacctcaggctgctctactcccagctccccggctacgccgtcgtgcagtccaagtgggcgcgcggcgcggcgcggccgccgtcggggaggtcgtcgagtttcctgtccatacccttctcggggtcgccgtcgacatccagtggcgccgccgagaagggaggccggccggagcagggcgcctcgccggtgggcgtcgccaacgtcaactccggcgtgttcgccggcgggccgccggtgcccgtcggcgcgcagaagctgctcaagttcgtggacacgtcgcaggtgaccatgggaccgcaggatagccccggttactggctcgtcaccggcgcaaggctggacgtcgacaaggggaagatcatgctgcatgtcaagttctcactgctagcccaagtttcttga</cdnaseq>

Protein Sequence

<aaseq>MAAVAAAEKAVRCLGRGFDMAGDLRLKYCKGGGAGCLVERRGET TPLTVPGVGVIADVPADVRCDKGDRVRFKSDVLEFNKMSELFNQRSSVEGKIPSGQFN ASFDLDSGSWAHDAPHTRCLAMDGYFISLFDLRLDHRHLALDAGVLADVPPAWDPSAI ARFIEKYGTHVIVGLSMGGQDVVYVKQDKSSSLSPSEIKEHLDRLGDQLFTGTCAMPP LHCRSKDKFKIPEAFNVFDAQVAQQRLHGITTLVSSKEGVTVIYSKRGGNTTVSSHSE WLLTVPAMPDVINVKLVPITSLIRGVPGTGFLSHAINLYLRYKPPVADLRYFLDFQHH CVWAPVLGELPLGPCSHRQGSSPALHFSLLGSKLYVSSTEVVVPKLPVTGMRLHLEGK KNNRLGIHLQHLSTTPTFVAAARADKPPVWRGTEAVTDDRYYEPVQWRMLARVCTAPV KYDPRWCAGDRRRRPAACVVAGAQLHVVAHDAANNVLHLRLLYSQLPGYAVVQSKWAR GAARPPSGRSSSFLSIPFSGSPSTSSGAAEKGGRPEQGASPVGVANVNSGVFAGGPPV PVGAQKLLKFVDTSQVTMGPQDSPGYWLVTGARLDVDKGKIMLHVKFSLLAQVS</aaseq>

Gene Sequence

<dnaseqindica>6052..6727#5200..5264#4924..5093#4637..4820#3514..3597#3195..3393#1692..1933#80..322#tttcctggacatgaagctgcaatggcagcatgtctggtcgtagtcaactagccagccaccaaagagagagctatcatccatggccgccgtggcggcggccgagaaggcggtgaggtgcctcggccgcggcttcgacatggccggcgacctgaggctcaagtactgcaagggcggcggcgccggctgcctggtcgagaggcgcggcgagacgacgccgctcaccgtgccgggagtcggggtgatcgccgacgtgccggccgacgtgaggtgcgacaagggcgaccgcgtccggttcaagtccgacgtgctcgagttcaacaaggttagcaccttaccttgtattgagatcatctactttcaaagttatcatacctttgtcactgtcatgggttcatggtttatcaagcccacatatcattgaaaaagtcacgtgatttcaagggtagaggattttcatccagtgccgctatgccaccattaattcaccctacatgatgataatatatatgggtatggctatgaatatatatatcatacgttggttttattctatatttgcttagttttttaaagatagttcaaagttttagatatttttgagtttttaaatatgagatagaaaatgggcaaagctgaagataacttgctcgaagctgctctatttaggtttttgaacaaaaggttgcattaattgaggaagatattcgggttattcataatttcagttgtcagtattcaccaaactgcagaagcaccgtattaacagaaaattactgttccaagaaaaaagaaaattactgtggttggttattggatgctaacagagttttcgcttattaatatttttagatattgacacgacatttgcggttctacgtgtttctcacgaactgtacttatcatcaaccatatcggcactgccaacatttttgcgacagaaaataaacacttgtcctaattttggtgtcccatcagtgtcaaatattcagtatctcaataaaagccgataaaatcaactttacaggaaaaaaatcctctttttttttctgaaagaagactttacagaaaatctgaaaaaagtgattatgtttgcttggttcgttggtattaagttgcatgcacctaaaagcctaagctgatagggaaaggcggacaattcactttatacactccaacactccccctcaagtctcaagcgtggaatattggagtgggctgtaattattttatttaattgcgcgccagccaggattcgaactcaagacctcttactctaataccatattaagctgcatgcaccagccagttacatctaaaaacctaagctaatagggaaaggcagataattcactttatacactccaacagttaggagtagtggtcctgctctaagttcaagtcaaatttgcctcattatctagttttttttaaaaacaagagagtcaaatttgcctgtaaaatagctacacttgtacttgtaaaaaacaggacagtggcacaccttgaactgcgacagggcctttgtttgactttcaccaaaagagatccgtcaaatgtacatcactgaacagaatcttgccaaaatttcagccttcctgaatgtgatcagttcaacaataatcaaaatcaaatagcattgtttctttttaaaaaagtttaaccaaatttgacgcattcacgcatgcacgcagatgtcggagctgttcaaccagaggagttcggtggaagggaagatcccgtcggggcagttcaacgcgtcattcgacctggacagcgggtcgtgggcccacgacgcgccgcacaccaggtgcctcgctatggacgggtacttcatctccctctttgacctccgtctcgaccaccgccacctcgccctcgatgcaggtgtcctcgccgacgtgccacccgcctgggacccctctgccatcgcaaggttagtggctagcttgtgagtactcctttctttaaaaaaaagtctaattctagctattagtttgaacacgcatgatttatagttagaattaagctttttatgtgacgaatggtgtagctagcttgttgcacgtacacaaataattgcattgcaactttacaagcgcatgcatgcatctgaaagctacctgcaaattgctcccttttctgaattctgagtggtcttgactgtcccttttctgaattctgagtggccttgactgacccaagagtggtcgattggccctgctgcgatttgagtgctgcaaatgcgcgctcgtgttaggatcatgatcttgataggcaacaacaacgcaacactcgctagaaatgtcaggtcccaaccagagacaagtagacaaaaacaatgggcagctgaaaaatcaaagcgtcgcatgcatgcaccagctttattcagttcaacccaaaagtttaagctgatcagtaaggatggacaattcacaagggtggctgttcgaagccacacatctgaccatttcatatcgaaaggtacaaatatagagtatgccatttggcatggctgcgacatgtggatggagattgaaaattctggattcctgtgggagttgggacaacaacgacggggactttctgtcgcacgatccagaaggatttaaattaacctgcaaattgcagccatgaagatgtacggaaaatcacttgcagatttgagagttgcagttgctggacttggactaattccaggtctggggatctcaagtcggtggctgaagaaagcagctcgattagatgtccaagtttgctgcaaaaaaaactgggtactgactgaatctatgacaagacaatgcgttacccagagaaacgaataattcagtcatgtccaaatcagggtgcttcatttcagatgattaaatatgatccaataatgcattgacatatacttctacacacatacatattctatctttttttcgtattatatatttgtccgtcttcgttgaaccgattacagatggtatgaactctgcacatgccgtcatttgactagcgtacacatgatttgtattactaggcagagccgtagctttcagagagagttctgaactgacgatgctgccgacaccatgtcacaatgtagtcgatcatgtagcaatcaatcgttagaacgctaatgacttgttcacgcaacacatccaagattaacctgatcctgattgattgatgcataattgcgtatgcagattcatcgagaagtatgggacgcatgtgatcgtggggctgagcatgggcggccaggacgtcgtctacgtgaagcaggataagtcgtcttctctgtcgccgtcggagatcaaggagcatcttgacaggctcggcgatcagctcttcaccgggacatgcgccatgccacctctgcactgcaggtccaaggacaagttcaaggttaaacatgtcaagtattgttaatgtacagtaattactctagaaattcagttgtcattctcatcagaagttgaaggtttttgtgctgaaattcagtgtctgtgtggtgaattgtgatagataccggaggccttcaacgtgttcgatgcacaagtagctcagcagaggcttcacgggatcaccactcttgtatcaagcaaggaggtaattaactgaatcactgtactctattttctagaacaaaaatggctaagggttctggcattctcaactcttgaatctttcgatcaattatgagataaactttgcattgcttgtgacataaatttctactatatctgtttctttttcttcgttggtttggacaacgagtcaatggcacagtcttcaatacatatatctcatctttacttttttttttccaacaccgtggctgtgtttagtgtatagttccctttaaatttctaaaaattccgtcacatcaaatgtttagacacatgcatggagtattaaatatgaacgaaaaaaatcaattacacagtttgcatgtaaattacgagacgaatcttttaagcctaattacgccatgatttgataatgtggtgctacagtaaacatttgctaatgaagaattaattaggcttaataaatttgttttgcagtttacatgcgaatctgtaatttattttggtattagtctacgtttaatacttcaaatgtgtgtccgtatactttaaaaaaaattggacagggaactaaacacggcctgtatttatgaaacttataaaaaaattgaccatatgaaatgtttttcatgaaaatatcttttaatatcaattttcacatattaaatcctactccctctagtttttttaccgataataccgttgacttttaaacatacgtttgaccaatagtcttattgaaaaataagtaattatatttattttactgtgacttaaatctattattaaagttactctaagtatgactttcattttggcatatttgtacaatattttcaagacaaatgattaaatatatattcaaaagtcagtatcgttatttattaaaacccaacgggaataatacttttttatttttaatgatcgaagatgtcacgacttgactgcgtgtatttgaggataatattttctttttgataacggaggtttgaccatatcttatattatggaatagagggaggactagctaattatatgagtttgctcatcgtgtgcagggtgtgacggtgatatactccaagaggggagggaacacgacggtgagcagccactcggagtggctcctgaccgtgccggcgatgcccgacgtgatcaacgtcaagctcgtccccatcacctccctcatcaggggcgtgcctggcactggcttcctctctcacgccatcaacctctacctcagatgtaacaacagaacagagcttaatgatttttcttttttagacgagtttatttactgttgattagtttaaaataacaaattaagcatgtgattggattgttacagataagcctcctgtcgctgacctgaggtacttcctggatttccagcatcactgcgtgtgggccccggtgctcggcgagctgcctctgggcccttgctcacaccggcaaggctccagcccggcgctgcatttcagcctgctgggctccaagctctatgtcagctcaactgaggtcagactctgaaacagcctctcactctgtcactgaaccagataaattccattctgtggttcactttccatggcgtgtgtgatccttcaaaataaaaaaattgcaggtggttgttccgaagctgccggttactggcatgaggctgcatctagagggcaagaaaaacaaccggtaagatttcacaggtttatttaaatataattaaatacacatgaaaacttgaaaataggtttttcttttttatagatgcacacccacgcactgagacacacatactactacacatgcacacctcacaaaatgtggctccccacgcgctcaatgaaattagtttgggggagcttatgtcagctctgcagctgcaagaaactcctcgaaacaaactagatgatcttcattcagataccaagaagttttagttgtagaatccagaaaataaactaaaagctagaagctagatttcccagattctttagattctcactagctaacttttcaccagctgcttctcagaattttaagtttccaaaatagaacataaaaccagcgacaactcagttatcagtccatcatgacataggcacctctgcattatctacaaacattttattattgtccaaggcatcaaacatcttccaggaaaaaacattttattatttgtcacccttatctcaatgacacgtgggtccatatgtgtcataacatttgggcccactaataaatggttaattgccacatttaatagtggcgaatagttaaatttctaaaaaaaaacaaagactacgatgaaaaagaaaaccttaaaactaacttttaagtaagttttaaactttgattggggccgatcagaaagagcatagaatgaaattgcatgttaacaagtttaggtatgcacagtacatatgttttgcgtcggatggtgtgtgactaaagtggatttcattgtgtcgtgcgtcaggctgggcatccacctgcagcacctgtcgacgacgccgacgttcgtcgccgccgccagggccgacaagccgccggtgtggcgtggcacggaggcggtcaccgacgaccggtactacgagccggtgcagtggcggatgctggcgcgcgtctgcaccgcgccggtgaagtacgacccgcggtggtgcgccggcgaccgccgccgccgccccgccgcctgcgtcgtcgccggcgcgcagctccacgtcgtggcgcacgacgccgccaacaacgtgctccacctcaggctgctctactcccagctccccggctacgccgtcgtgcagtccaagtgggcgcgcggcgcggcgcggccgccgtcggggaggtcgtcgagtttcctgtccatacccttctcggggtcgccgtcgacatccagtggcgccgccgagaagggaggccggccggagcagggcgcctcgccggtgggcgtcgccaacgtcaactccggcgtgttcgccggcgggccgccggtgcccgtcggcgcgcagaagctgctcaagttcgtggacacgtcgcaggtgaccatgggaccgcaggatagccccggttactggctcgtcaccggcgcaaggctggacgtcgacaaggggaagatcatgctgcatgtcaagttctcactgctagcccaagtttcttgacgacgagtcgacgagggtgtcaagatgttcatgaccatcccgtgatccagagtttgtacagttttcagctgccaaatgcagatatgctaacaactgaaaaaacagaatattccaaaaaaatttgatttttgattttttttttttggtttggaccctgaagatgttgcaacgatctgtaaatgaaaaaagatagtaggaaccagaggtatcattctaacactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0736300, RefSeq:Os02g0736300