Difference between revisions of "Os02g0760200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0760200| Description = C2 calcium/lipid-binding region, CaLB domain containing protein| Version = NM_001054722.1 GI:115448814 GeneID:4330799...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0760200|
 
GeneName = Os02g0760200|

Revision as of 19:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0760200

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001054722.1 GI:115448814 GeneID:4330799

Length

8888 bp

Definition

Oryza sativa Japonica Group Os02g0760200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32894875..32903762

Sequence Coding Region

32894951..32895064,32895915..32896081,32896179..32896253,32896334..32896468,32896992..32897110
,32897276..32897572,32897643..32897730,32897835..32897940,32898095..32898205
,32898888..32899051,32899605..32899725,32900326..32900550,32900635..32900825
,32901026..32901193,32901279..32901384,32901669..32901806,32901901..32902065
,32902145..32902348,32902709..32902903,32902971..32903042,32903165..32903317

Expression

GEO Profiles:Os02g0760200

Genome Context

<gbrowseImage1> name=NC_008395:32894875..32903762 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32894875..32903762 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctgcagagaattacagccgcactgcacctttaaactcaagaacatatcaacaggataagtattctgcccatgtccctgctcaagacaatgtgaaatcttctcaaatggatggactatctgatgtacccagtgcaccgccaatacatgcttatgatcaggaaataagccaagtttctcaaaatgttgatgcaaacgtatgcgatggttcgactgtcaaaaaagaggaatataatgatgatggcttggaacctaacttgcctgagaaaagtgaaaggagcactttaaatcctgggcacagcagcaaaccatctagttcaattcctcttcgagtccccacgtttcatgccagtttgcaagggccctggtattctgttcttgcttatgatgcttgtgttcgcttgtgccttcatgcatgggctagaggttgcatggaagctcctgtttttctggaaaatgaatgcacacttctgcgaaatacattttgcctgcaaaatgtgcttctacaatcagaagaagagctcatggcaaaacggacatctgagcttgttagcgatggagttgcatccaaacccaagaaaacaattggcaagatgaaggttcaagtgcggaaagtccggatgtctgtagatgtaccatctggttgcaatttctcatcattgccgatggtgaaactaaattcagttcggtaccgtttgtcaaatgtacaatccacactctcctctggatgggagtcggttcgaaggatccaaactttaccacagctacctgctaacagttccttttcaaaacatagcttagcgtacatgcaagcaagtgctcagtacatcaagcaggtatctggtgtgctaaaagttggcgtgactaccctgcgcaacagctcatcctatgaaacaccgcaagagacttactcttgccaattgaggcttaaaagtacacctgaagatgatgttgtaccgatgcagccaggatctggtgaaacacatgtcttcttcccggatagccttggagatgatttgatcattgatgtttctgattcaaaaggaaagccctgtggacgtgttgttgctcaagttgctacaatggcagaggaatctactgacaagcttcgttggtggtcaatataccgggaacctgagcatgaactcgtaggccgcatacagctatacatacactacacaactgctgcagatgagaacaacacgaagtatggctctgttgcagaaactgtggcttatgatattgttttggaagttgcaatgaaagcacagcacattcaacaacggaatctcatcttgcatggttcctggaaatggttgttgacagaatttgcattgtactatggcgtttcagatgcctacacaaagctgaggtatctctcttatatcatggatgttgcaacccctactgctgattggctcaatctggttcatgaccttttgttacccgtactaatgaagacccaaggcactgctgcattgagccatcaagagaaccgcatattaggtgaagttgaggagcaaattgagcaaactttagcgatggtatttgagaattacaagtctctgaatgaatctttgccgtcgggtttagtggaagattttagacctccaactggtttggctgcttgtgctctagaaccagctataaagctttacagtcttctccatgatgtattatctccagaggctcaactcagattatgcggttatttccaggctgctgccaggaaacgatcaagacgatacatgcttgagactgatgaatatgtagcaggaaattccgaaggcataagagtggatctggtgacctttacaacagcttaccagaagatgaaatcattatgctgtaatctacgtaatgaaatctttacagacattgaaattcataaccagcacatacttcccagttttgttgacctccccaatttagctgcgtccatctatagtgtggaactctcaaatagactgcgtgcttttcttgtggcatgccctccaactggcccttcatcacctgttgctgatttggtgattgcaactgctgactttcagaaggaccttgctagctggaatatatgcccaattaaagccggtgttgacgcaaaagagctatttcatttgtacattgtcttatggatcgaagacaagcgcaggacgttgctggaaaattgcaggatggataaggttaaatggtcaggagttaggactcagcatatgaccacaccttttgtggacgagatgtatgatttgctgaagaatacattgacagagtacgaggttatcatttgccgatggccagaatacatatttgttcttgagaatgctattgcggatattgagaaagcagtgatagagtctcttgaaaaacagtacggggatgttttggctccacttaaggattgtattgccccaaagaaatttggtctcaaatatgtgcagaaactcacgaagcgcaattcagttggcccctatactgtacctgaagatctgggcattctcctgaatacaatgaaaagactattagatgttttgcggccaaggattgagagtcatctgaagtcatggagttcttgtatgcctaatggaggaaactctgcagctattggggagagacttagtgaagttacggtaacactgagggccaaattccgaaactacatgcaagctgttgtggagaagctctcagaaaatactcgcatgcaaaatactacaaagctcaagaagatcattcaggattcaaaagaattggtgatggagtcagatattcgaagcaggatgcaagcgttgaaggaccaacttgttgaggcaataaatcatgtacacaaggtcactgaagtccatgtgtttgtagctatatgccgaggtttttgggaccgaatgggacaggatgtcttgagtttcctggagaatcgcaaagaaaacagagcctggtacaaaggcgcacgtgttgcagtatctgtgctggatgatacatttgcatcccagatgcagcagctgctgggtaattcgatccaacagaaggagctggaaccacctagatccatcatggaagttcggtcgatcctctgcaaagatgcaccccgacagaagaactctagcttctattactga</cdnaseq>

Protein Sequence

<aaseq>MAAAENYSRTAPLNSRTYQQDKYSAHVPAQDNVKSSQMDGLSDV PSAPPIHAYDQEISQVSQNVDANVCDGSTVKKEEYNDDGLEPNLPEKSERSTLNPGHS SKPSSSIPLRVPTFHASLQGPWYSVLAYDACVRLCLHAWARGCMEAPVFLENECTLLR NTFCLQNVLLQSEEELMAKRTSELVSDGVASKPKKTIGKMKVQVRKVRMSVDVPSGCN FSSLPMVKLNSVRYRLSNVQSTLSSGWESVRRIQTLPQLPANSSFSKHSLAYMQASAQ YIKQVSGVLKVGVTTLRNSSSYETPQETYSCQLRLKSTPEDDVVPMQPGSGETHVFFP DSLGDDLIIDVSDSKGKPCGRVVAQVATMAEESTDKLRWWSIYREPEHELVGRIQLYI HYTTAADENNTKYGSVAETVAYDIVLEVAMKAQHIQQRNLILHGSWKWLLTEFALYYG VSDAYTKLRYLSYIMDVATPTADWLNLVHDLLLPVLMKTQGTAALSHQENRILGEVEE QIEQTLAMVFENYKSLNESLPSGLVEDFRPPTGLAACALEPAIKLYSLLHDVLSPEAQ LRLCGYFQAAARKRSRRYMLETDEYVAGNSEGIRVDLVTFTTAYQKMKSLCCNLRNEI FTDIEIHNQHILPSFVDLPNLAASIYSVELSNRLRAFLVACPPTGPSSPVADLVIATA DFQKDLASWNICPIKAGVDAKELFHLYIVLWIEDKRRTLLENCRMDKVKWSGVRTQHM TTPFVDEMYDLLKNTLTEYEVIICRWPEYIFVLENAIADIEKAVIESLEKQYGDVLAP LKDCIAPKKFGLKYVQKLTKRNSVGPYTVPEDLGILLNTMKRLLDVLRPRIESHLKSW SSCMPNGGNSAAIGERLSEVTVTLRAKFRNYMQAVVEKLSENTRMQNTTKLKKIIQDS KELVMESDIRSRMQALKDQLVEAINHVHKVTEVHVFVAICRGFWDRMGQDVLSFLENR KENRAWYKGARVAVSVLDDTFASQMQQLLGNSIQQKELEPPRSIMEVRSILCKDAPRQ KNSSFYY</aaseq>

Gene Sequence

<dnaseqindica>77..190#1041..1207#1305..1379#1460..1594#2118..2236#2402..2698#2769..2856#2961..3066#3221..3331#4014..4177#4731..4851#5452..5676#5761..5951#6152..6319#6405..6510#6795..6932#7027..7191#7271..7474#7835..8029#8097..8168#8291..8443#gggtgggtatgcatctgagtactctcataacggcccagcgcgaagagaagcgaacaatgcagttccgaaaacccggatggcagctgcagagaattacagccgcactgcacctttaaactcaagaacatatcaacaggataagtattctgcccatgtccctgctcaagacaatgtgaaatcttctcaaatggtacgtttctgcgcttacctgtaaagcatattcattttcttatcctcagcttcagtatcttatttctgtgaaagcaatagcattacttgtcatttccattttacttcattctgcggtaccatgtacaagcactcacctttcggttgagttaggaaagaaaagcctgtattgcataaagctgaaaatgtttatggtcagtagtatgtgaacccgcaccaagcaaccagctgctaaaaaaaattagcacctaaacttaaaaatgaaacagttttcttgttttgaggaatcatctgtccagaatctagattacctgatactgtttgttgcattctatatctcagaattttgttcgatagtatgtcctccacaactccatagttctctgagaaaaaaaaatatttccccccttccatgaatattttctttttcttttttttggtggggttccatgaatattttctgaagcagaattgtaatttagttcactttgattatggtctggatgattaaaaaaacaatttttgcttctggattctaaagagaaaccctctcctaggattatctgtcataaatctggaacatttgcttcctcttgagaaaagcatgtgcgctgagcaggtactgtaatcttgtatgcaaaaccgtttttaaaatgcagttttctggggaatgttttgttgtcaagttttctataaatgatccaaactagccaaaggaaatcatatatattgagaatttttatattgataagttttcagggaacaatatgtgatgtgttgattgaacatgtcgcacgatgacattgttacttttaagttgtgtaattgtgatgattgatttttatgtgcaggatggactatctgatgtacccagtgcaccgccaatacatgcttatgatcaggaaataagccaagtttctcaaaatgttgatgcaaacgtatgcgatggttcgactgtcaaaaaagaggaatataatgatgatggcttggaacctaacttgcctgagaaaagtgaaaggtagcttttgtaatacatgttatttgttaaatacttcttgagaagtttttttttgttatgtttgcatttatttctgtaaaattgttcggttatgtaggagcactttaaatcctgggcacagcagcaaaccatctagttcaattcctcttcgagtccccacgtttcatgccaggtatgtgtagtaagcaagtcataatttgttctggtgtactatgctcactactaacacatttcttaaaaaaattatccaagtttgcaagggccctggtattctgttcttgcttatgatgcttgtgttcgcttgtgccttcatgcatgggctagaggttgcatggaagctcctgtttttctggaaaatgaatgcacacttctgcgaaatacattttggtgagttattttttatgcatgaacaatgctttctgctcataaaatatgacagtatgtaaaatgccattaactactgtagctgtctatgtttgctggctttatacctgcctattctgaacctgaggtgaacagtgctttaagtttctgtctgcaattgccaattcttgtactttgaaaaatctttaaataaattcctcagatacaaaatttatctattcattctagttttacttgactgctgtggttgttcctgtccattgatttgctacagttggaaatatttatggatcttgagtaaattgttattgtactttcctttttttaaaatggatactttagaagtcaaaactgatagaaagtgtttggatctagcctcttgtaaacataacctaaacatttgttatccatgtgctaaactgctaatgcacattcatgctgatagtgcttaaatatttgtttcactccatccttagtgcataaacagtaatacaatcttaagttgatattcttgtttattttttagcctgcaaaatgtgcttctacaatcagaagaagagctcatggcaaaacggacatctgagcttgttagcgatggagttgcatccaaacccaagaaaacaattggcaagatgaaggttcaaggtatggaaacccaacactggctattttcccctactgtttatgaaaactacttatatccacatcttcatagctaccattaccagaatattgatttgcattgtcattgttgcatgcaaaggaatgccaagatgatagtgctaacttagttaatatttccaattgcagtgcggaaagtccggatgtctgtagatgtaccatctggttgcaatttctcatcattgccgatggtgaaactaaattcagttcggtaccgtttgtcaaatgtacaatccacactctcctctggatgggagtcggttcgaaggatccaaactttaccacagctacctgctaacagttccttttcaaaacatagcttagcgtacatgcaagcaagtgctcagtacatcaagcaggtatctggtgtgctaaaagttggcgtgactaccctgcgcaacagctcatcctatgaaacaccgcaaggtatatatggatcacttctcttttaacattgagttccctaactgaatccatcatgtcctttttgcctcagagacttactcttgccaattgaggcttaaaagtacacctgaagatgatgttgtaccgatgcagccaggatctggtgaaacacatgtcttgtatgtagcaagacctttctttgagcacatatatcattgttttgcctggaaatctgaatattatgagattagtgaggctgaatatttttatgtaaatatttcagcttcccggatagccttggagatgatttgatcattgatgtttctgattcaaaaggaaagccctgtggacgtgttgttgctcaagttgctacaatggcagaggaatctgtatgattttccaaaccaacttgctactctctgtttaagttctttaaatagaagttattgtagattttcatacttgctctaaatggttattgtacaatctatgacttcttcaaaatccttgttccttacagtatttctcaactttcttgtgtagactgacaagcttcgttggtggtcaatataccgggaacctgagcatgaactcgtaggccgcatacagctatacatacactacacaactgctgcagatgagaacaacacgaaggtactgattcagtgttctgcaaattcaggtcttatcatcttaggatgttatgtattcatgtgaatttaatttatttgatacctgttaattgcagcactgtaacctattgctcatttctcccccacactccttttgctagctgtcgatttactgaacaccttaaatgacacggatgattttcatggatggcattttttaccatttgattgtttcctgtataacatggaaacaacagtatatcaatcattgatcaacttacttatattttcctgtcatggttgtcacttaaaaaaaagagtgtaaaacagcctttatcatgtatttagactgtagactttgttcttgccagacatatcatgattcgactgaagttttcttttatttatgttactatgaattccagcatgtcagcaaaggaaatgtttcctaaatcttcattctgatggaataacatgaaacaagagtgattttacattgtagatttgaatttgtctgaacagggtagtctgtttatcaggatctaagtcatataaacatgatttaaaagtatacctttctttcgtagctgcctgattcgaaatggcctatccattttgagattaaaaatgtgctctattgagtggaagggatacttgactaattgacatctatttaattttcatggccgtgattttctttgcagtatggctctgttgcagaaactgtggcttatgatattgttttggaagttgcaatgaaagcacagcacattcaacaacggaatctcatcttgcatggttcctggaaatggttgttgacagaatttgcattgtactatggcgtttcagatgcctacacaaagctgaggtatttggctattactataggaccaataaccatcacttttacttaggctgcgttcgtgagcatgggttgggaaccctccctcccatgcacgcaaaacgaagcgactgtttaatgcatgattaattaagtattagctaaaaaaacttgaaaaatggattaatatggttttttaaaacaactttcatatagatttttttttggcaaaaaacacaccgtttagcagtttgaaaagcgtgcgcgcgtaaaacgagggaggtgagttgggaaagttggggaaagaactcagccttagcatatagttgttggcatgacgttgtgacttaacttgcttaagtcttgccatatgttcccttttcttgatctgtctagatgcaagaaatatttacaatacctgatgagattatttaagtctgactcacaaggctgttctagcagttgattagaacctttaaatttttctatcatatcataattttttttcaaatatctgtcatcttccctcatttcctttcctttgctattgctgagtgctagcccttgactccttgttcaggtatctctcttatatcatggatgttgcaacccctactgctgattggctcaatctggttcatgaccttttgttacccgtactaatgaagacccaaggcactgctgcattgagccatcaagaggtactgttcttttcttcagatatttcccctggaacagcaagttctgttgcacatctgatagcaaatgccatgatttaatgttaatgctatatagtatattatccaagaaattcccttccttacacccaataatgtgtgggagctttcagcactgggtgtacccttgtttgtgttgatgttatgttatccttgtgtgcaatagcagtactgcacctatatgctaactgtttacaaatgaatgtgtattttatatgttctaatattaaaagaaatgctagaataattatcttcagatgtaaaactaaagaaatttgtatcaaccgactatctatatgtaagcacatatacggtatggaattattttaaatcttacaaatggtacacaattgtatacatgtatcaatctatagaagatcaccatagagcacaccaacaccatcaccaactcttcttatgttgtagagataacaggcaaattaatctagttacgtggaataaattatattatgctttattggcttattttgttttttctttctgaaattgcttatgtaacattaacatcttaactgtgctgcttcactggaattgtatcatcagaaccgcatattaggtgaagttgaggagcaaattgagcaaactttagcgatggtatttgagaattacaagtctctgaatgaatctttgccgtcgggtttagtggaagattttagacctccaactggtttggctgcttgtgctctagaaccagctataaagctttacagtcttctccatgatgtattatctccagaggctcaactcagattatgcggttatttccaggtcattcttcaactgttttatatctcgatatttatcttctatagccagaactctgtagcttgatttattcaaaaatatgtccaggctgctgccaggaaacgatcaagacgatacatgcttgagactgatgaatatgtagcaggaaattccgaaggcataagagtggatctggtgacctttacaacagcttaccagaagatgaaatcattatgctgtaatctacgtaatgaaatctttacagacattgaaattcataaccagcacatacttcccaggtattgtgattgtattgcaacatctgttctaggctagtatattaccatgtactgttattcattacttactttgtatgcatagtttcattgtagagtatttagacgcgttgactattctactgattatattgcttttgctattgtttctatttttttctatcaatcatttcaattttatgtttgtccctctgcttctacagttttgttgacctccccaatttagctgcgtccatctatagtgtggaactctcaaatagactgcgtgcttttcttgtggcatgccctccaactggcccttcatcacctgttgctgatttggtgattgcaactgctgactttcagaaggaccttgctagctggaatatatggtaaaaaagaattcttatgtgtttgctaggttctcttctttctcatgccttgtctaggcaagactgaatttgaatttctgcacagcccaattaaagccggtgttgacgcaaaagagctatttcatttgtacattgtcttatggatcgaagacaagcgcaggacgttgctggaaaattgcaggatggataaggtaggttctgctctttcttttgctcctgttcattgttgatctatgatatgtttggttagcacaggttcttcatatgacaaataccatttgctattggtactgtgttgcctcagtgttaatccagtatttatctttgcttttattctccatttgtgtaacattggagaggttatatgtaggtactgtgccctggcagctactaaaatagtttgtccacccaggttttcagtcaatatattttgtaattgtatctcattatgcatcaccttctccaattatatcaggttaaatggtcaggagttaggactcagcatatgaccacaccttttgtggacgagatgtatgatttgctgaagaatacattgacagagtacgaggttatcatttgccgatggccagaatacatatttgttcttgagaatgtaagtttgtatcattcatgggacctttattgaactgttgcacagcaaagaaatccaacttaacatgtgctatttccttgctttacaataaaaggctattgcggatattgagaaagcagtgatagagtctcttgaaaaacagtacggggatgttttggctccacttaaggattgtattgccccaaagaaatttggtctcaaatatgtgcagaaactcacgaagcgcaattcagttggcccctatactgtacctgaagatgtaagttttgttgttgaactgttggtccacatttatttgaatttcaagtcttactatttgaccccttatttgctttcagctgggcattctcctgaatacaatgaaaagactattagatgttttgcggccaaggattgagagtcatctgaagtcatggagttcttgtatgcctaatggaggaaactctgcagctattggggagagacttagtgaagttacggtaacactgagggccaaattccgaaactacatgcaagctgttgtggagaagctctcagaaaatgtgagtgtattgcgacattttatgcagttttaccttttcaaacgctgacttatttgcagtcattttagagagagctcgcaacccagtcaccctggacacaaatagattttaatgtcataactgatccattatgctactttgatctggagtcatttaaaaaagacactttttagggaatttagtcttgattatcagtaatgctgctttgactaatagcactcaattttctgttctatatgtagcaatttagcagtcaattcaactgcggagacagttgctttgttgacacctttgatggatgatgtgttgttaagtttgttgaaaaatattgtattcttatcttctgttttttttttgaagactcgcatgcaaaatactacaaagctcaagaagatcattcaggattcaaaagaattggtgatggagtcagatattcgaagcaggatgcaagcgttgaaggaccaacttgttgaggcaataaatcatgtacacaaggtcactgaagtccatgtgtttgtagctatatgccgaggtttttgggaccgaatgggacaggtatgaatagaagtacccttcatatttttctctttgtcatacatgttactaatcaacctggttttaggatgtcttgagtttcctggagaatcgcaaagaaaacagagcctggtacaaaggcgcacgtgttgcagtatctgtaagtttatgctcctacagtccccatgtcaccctgcttgccagtgacggcctatttatttagttctccattgttgatgctcctcctttctgctatgattaaataaacatgcaacattgcaggtgctggatgatacatttgcatcccagatgcagcagctgctgggtaattcgatccaacagaaggagctggaaccacctagatccatcatggaagttcggtcgatcctctgcaaagatgcaccccgacagaagaactctagcttctattactgagcatttttggtgtacataccagtcactggaagaataaggacgtgttgacatgctgcggaagatgcaaagtgaagatgtgggaatctatgtaaaggaaaaatgtgaaaaatataaagatataagtacaacaaaaaaacaaggctacagaagggtcccattgaagacttgaagtgcatgaccggagaagatggcctaccagataagtccatcaaatgatactttgctggttaaacctggttcaagtatgcttctgctgcctgtgggatggtctgcattgaaaaattggactgcactgtaggtagtgtagtttaagtgatgctttaggttagatcatcgatagcatctatctgtgctcacacaattgccaatgttagtgtttcgaggtcgatgactcgttgatagaaattattttcttctaatgtatggacgggacaattgattgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0760200, RefSeq:Os02g0760200