Difference between revisions of "Os02g0788600"

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(Created page with "{{JaponicaGene| GeneName = Os02g0788600| Description = Clp, N terminal domain containing protein| Version = NM_001054884.1 GI:115449138 GeneID:4330965| Length = 3121 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0788600|
 
GeneName = Os02g0788600|

Revision as of 19:24, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0788600

Description

Clp, N terminal domain containing protein

Version

NM_001054884.1 GI:115449138 GeneID:4330965

Length

3121 bp

Definition

Oryza sativa Japonica Group Os02g0788600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34389503..34392623

Sequence Coding Region

34389503..34390972,34391095..34391344,34391446..34392623

Expression

GEO Profiles:Os02g0788600

Genome Context

<gbrowseImage1> name=NC_008395:34389503..34392623 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34389503..34392623 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagcctactcggcgacggcggccgcggcggcggtggcgtcgctgccgtcggccgcgccgccgctgactcccgacgcggcggcggtgctgtcacgcgccgcggcggacgcgtcgaggcggcggcacgcgcacaccacgccgctgcacgcggcggccgcgctgctgtccggcccggcgccgctgctccgcgacgcctgcgtggcgggcctcgcgtcgccgcacccgctccggtgccgcgcgctcgacctctgcttcgccgtcgcgctcgaccgcctcccgacgtccacggagcaccagcaccaccacgcggcgccgccgctctccaacgcgctcgccgccgcgctcaagcgggcgtacgcgcaccaccgccgcatcggcagcggcgtggtcgaggcggacgaccaccgcgtcggcgtgccgcacctcgtgctcgccatcctcgacgacccctccgtcgcccgcgtcatgcgcgaggcatccttctccagcaccgccgtcaaggccgccatgctgcgctccctctccgaccccgccgcccccgactccggcgtctacgtcaacgccagagtgctgcaccggcaggtgtcccaccgggaggaggaggtgaacaaggtggtggaagttctcaagcggggcaagaagcgcaacccggtgctcgtcggcgacacggtggacgtggacgccgtggtacaagaggttgtcaccatgatacagaggcaacggctcggcaatgcgcgagtcatctccttccagagagaattcggcgacctggtcgatctcgacagggcggagctcgccgccaagatcaaggagctcggcgaggcgataagatcggagctactctcgccggcgtccaggagcgccggcgtcgtcgtcaacctcggcaacctgcagtggctcgtcgaggagagatgcgtggcccccggcgagcaagagaagcggagggacgtggtgctcgacacggcgcgcgccgccgtggccgagatggcgcgcatcctgaggcagtccggcgagcgcgagcaccgcgtctgggtgatcggcacggcgacgtgcgccacgtatctcaagtgccaggtgtaccacccgtcgctggagagcgagtgggacctccaggccgtgcccatcacgccgcgaccgccgccgccgccgccgtcatcgctcggcctctcgccgagtgttaatggagttaacagaggcatcctgagcagctcggtggaggtgttgtcatcggcgatgaccaccagtgcaatgcaaagcaggtcgccgagcctgtgcagcgcctgcctcgacggctacgagcgcgagcgcgccgacatggcgtcgtcgccgggctgcggcgcgctccatgccacggagcagcccatgtcgcagtggctgcagatcgggacgccgagcagcgcacggccaccgttcgaccgcgcgcaggacaaggcgcgggaggctgacgagctgcgacgtcggtggctcgaccggtgcgcgcagctgcactcccacggcggcggcggctgcggcggtggccggccgtcgtcgatggtcacttgctcggaatggaacggcgcaagcgtcctcgccaacatgcaggctataccagtaaggccgccgccaccggcggccgcggcggcgcctgccgccgcggtggacaccgacctcgcgcttgggccggcggcatcaacggcgtcgaggccaccggcgtactgtgacaccgacgagaagctgctcgtgaaacggctcacggaggcggtgcgatggcaacccgaggctgctgccgctgttgccgctgcgatcacgaaggccaggtccggcgagcggaagcggcgtggcatggggcccaccagggccgacacgtgggtcctcttctccggccatgacgtggccgggaagacgaagatggcggaggcgctgtccatgtcggtctttggcacgaacgccgtcgcgctgcgcctcgccggcaacggcggcgagcccatcgcgtcgtgccgcggccggacggcgctggactgtgtggccgacgccatacgtgccaacccgctgcgtgtcatcgtgctcgacggattcgaccaccacgacgacgacagagtcgtgcaggcgtccatactacgcgccgtcgagtccggccgcctcgtggactcgcgcggccgggacgtcgccctcggcgaagccatcttcgtcgtcatgtcgctggacgacacgaggcggtgccaagaggatcatcagttcaccgactcgccatggaaccttgagctccgagtccggaacaacgcacggaagcggaggccggagccgcagccgctcgacggcgccggcgaccggcggttgaaaccgcgcaaagactcgcctccgcttcaccttgacctgaacctgtccatgtgcgaggatcacaccgacgacgacgacagcggcggcgaggaatcccggaactcgtccagtgacctaacggtggagcacgagcaggagtacggccaacccgccgctgccgccgccaagttctcggctccgtcgagcttctccgagctcaccaaagccgtggatgcaacggtggtgttcaagcccgtcgacttcgggccgctcaaacggagcgtctccgacgtggtctcggcgaagctcggggacgccgccggcgccggcgccggtttgtccgtacacgtcgacgacggcgtgctggacaggctggccggcgcggcgtggacggcgggagagtcagccacgtcgttggaggcgtgggccgacgaggtgctgtgccctaccatacggcagctgaaacgtagcttgagcgccaacgatgtcgacggcgcgacgacggtgagcttgtcggcggtggaaggcagcggcggccgccggaggaaggacggcgaggtgttcccgacgtcggtgaccgtcgccgtcgacggaaactga</cdnaseq>

Protein Sequence

<aaseq>MRAYSATAAAAAVASLPSAAPPLTPDAAAVLSRAAADASRRRHA HTTPLHAAAALLSGPAPLLRDACVAGLASPHPLRCRALDLCFAVALDRLPTSTEHQHH HAAPPLSNALAAALKRAYAHHRRIGSGVVEADDHRVGVPHLVLAILDDPSVARVMREA SFSSTAVKAAMLRSLSDPAAPDSGVYVNARVLHRQVSHREEEVNKVVEVLKRGKKRNP VLVGDTVDVDAVVQEVVTMIQRQRLGNARVISFQREFGDLVDLDRAELAAKIKELGEA IRSELLSPASRSAGVVVNLGNLQWLVEERCVAPGEQEKRRDVVLDTARAAVAEMARIL RQSGEREHRVWVIGTATCATYLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSP SVNGVNRGILSSSVEVLSSAMTTSAMQSRSPSLCSACLDGYERERADMASSPGCGALH ATEQPMSQWLQIGTPSSARPPFDRAQDKAREADELRRRWLDRCAQLHSHGGGGCGGGR PSSMVTCSEWNGASVLANMQAIPVRPPPPAAAAAPAAAVDTDLALGPAASTASRPPAY CDTDEKLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTRADTWVLFSGHD VAGKTKMAEALSMSVFGTNAVALRLAGNGGEPIASCRGRTALDCVADAIRANPLRVIV LDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVVMSLDDTRRCQEDHQF TDSPWNLELRVRNNARKRRPEPQPLDGAGDRRLKPRKDSPPLHLDLNLSMCEDHTDDD DSGGEESRNSSSDLTVEHEQEYGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVDFGP LKRSVSDVVSAKLGDAAGAGAGLSVHVDDGVLDRLAGAAWTAGESATSLEAWADEVLC PTIRQLKRSLSANDVDGATTVSLSAVEGSGGRRRKDGEVFPTSVTVAVDGN</aaseq>

Gene Sequence

<dnaseqindica>1652..3121#1280..1529#1..1178#atgagagcctactcggcgacggcggccgcggcggcggtggcgtcgctgccgtcggccgcgccgccgctgactcccgacgcggcggcggtgctgtcacgcgccgcggcggacgcgtcgaggcggcggcacgcgcacaccacgccgctgcacgcggcggccgcgctgctgtccggcccggcgccgctgctccgcgacgcctgcgtggcgggcctcgcgtcgccgcacccgctccggtgccgcgcgctcgacctctgcttcgccgtcgcgctcgaccgcctcccgacgtccacggagcaccagcaccaccacgcggcgccgccgctctccaacgcgctcgccgccgcgctcaagcgggcgtacgcgcaccaccgccgcatcggcagcggcgtggtcgaggcggacgaccaccgcgtcggcgtgccgcacctcgtgctcgccatcctcgacgacccctccgtcgcccgcgtcatgcgcgaggcatccttctccagcaccgccgtcaaggccgccatgctgcgctccctctccgaccccgccgcccccgactccggcgtctacgtcaacgccagagtgctgcaccggcaggtgtcccaccgggaggaggaggtgaacaaggtggtggaagttctcaagcggggcaagaagcgcaacccggtgctcgtcggcgacacggtggacgtggacgccgtggtacaagaggttgtcaccatgatacagaggcaacggctcggcaatgcgcgagtcatctccttccagagagaattcggcgacctggtcgatctcgacagggcggagctcgccgccaagatcaaggagctcggcgaggcgataagatcggagctactctcgccggcgtccaggagcgccggcgtcgtcgtcaacctcggcaacctgcagtggctcgtcgaggagagatgcgtggcccccggcgagcaagagaagcggagggacgtggtgctcgacacggcgcgcgccgccgtggccgagatggcgcgcatcctgaggcagtccggcgagcgcgagcaccgcgtctgggtgatcggcacggcgacgtgcgccacgtatctcaagtgccaggtgtaccacccgtcgctggagagcgagtgggacctccaggccgtgcccatcacgccgcgaccgccgccgccgccgccgtcatcgctcggcctctcgccgaggtttgcatccgtgacaaacacagcatactgcctccatcatcaacctcgcctttttttccacgacgataacgatgtgtttgtgttctctttgtgttttacagtgttaatggagttaacagaggcatcctgagcagctcggtggaggtgttgtcatcggcgatgaccaccagtgcaatgcaaagcaggtcgccgagcctgtgcagcgcctgcctcgacggctacgagcgcgagcgcgccgacatggcgtcgtcgccgggctgcggcgcgctccatgccacggagcagcccatgtcgcagtggctgcagatcgggacgccgagcagcgcacggccaccgttcgaccgcgcgcaggttggttcggtttggtttttttgccgcgcacgacaacgacaaactaagccgcgtcgtgttccgtcgccgtgagcagcgcattgacgtgcggaatctctctctctgtgtctgtcgctttgcaggacaaggcgcgggaggctgacgagctgcgacgtcggtggctcgaccggtgcgcgcagctgcactcccacggcggcggcggctgcggcggtggccggccgtcgtcgatggtcacttgctcggaatggaacggcgcaagcgtcctcgccaacatgcaggctataccagtaaggccgccgccaccggcggccgcggcggcgcctgccgccgcggtggacaccgacctcgcgcttgggccggcggcatcaacggcgtcgaggccaccggcgtactgtgacaccgacgagaagctgctcgtgaaacggctcacggaggcggtgcgatggcaacccgaggctgctgccgctgttgccgctgcgatcacgaaggccaggtccggcgagcggaagcggcgtggcatggggcccaccagggccgacacgtgggtcctcttctccggccatgacgtggccgggaagacgaagatggcggaggcgctgtccatgtcggtctttggcacgaacgccgtcgcgctgcgcctcgccggcaacggcggcgagcccatcgcgtcgtgccgcggccggacggcgctggactgtgtggccgacgccatacgtgccaacccgctgcgtgtcatcgtgctcgacggattcgaccaccacgacgacgacagagtcgtgcaggcgtccatactacgcgccgtcgagtccggccgcctcgtggactcgcgcggccgggacgtcgccctcggcgaagccatcttcgtcgtcatgtcgctggacgacacgaggcggtgccaagaggatcatcagttcaccgactcgccatggaaccttgagctccgagtccggaacaacgcacggaagcggaggccggagccgcagccgctcgacggcgccggcgaccggcggttgaaaccgcgcaaagactcgcctccgcttcaccttgacctgaacctgtccatgtgcgaggatcacaccgacgacgacgacagcggcggcgaggaatcccggaactcgtccagtgacctaacggtggagcacgagcaggagtacggccaacccgccgctgccgccgccaagttctcggctccgtcgagcttctccgagctcaccaaagccgtggatgcaacggtggtgttcaagcccgtcgacttcgggccgctcaaacggagcgtctccgacgtggtctcggcgaagctcggggacgccgccggcgccggcgccggtttgtccgtacacgtcgacgacggcgtgctggacaggctggccggcgcggcgtggacggcgggagagtcagccacgtcgttggaggcgtgggccgacgaggtgctgtgccctaccatacggcagctgaaacgtagcttgagcgccaacgatgtcgacggcgcgacgacggtgagcttgtcggcggtggaaggcagcggcggccgccggaggaaggacggcgaggtgttcccgacgtcggtgaccgtcgccgtcgacggaaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0788600, RefSeq:Os02g0788600