Difference between revisions of "Os02g0813800"

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(Created page with "{{JaponicaGene| GeneName = Os02g0813800| Description = Similar to STYLOSA protein| Version = NM_001055022.1 GI:115449524 GeneID:4331114| Length = 10324 bp| Definition = O...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0813800|
 
GeneName = Os02g0813800|

Revision as of 19:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0813800

Description

Similar to STYLOSA protein

Version

NM_001055022.1 GI:115449524 GeneID:4331114

Length

10324 bp

Definition

Oryza sativa Japonica Group Os02g0813800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35749418..35759741

Sequence Coding Region

35749818..35749961,35750391..35750588,35750890..35751006,35751121..35751276,35751560..35751709
,35751786..35751895,35751957..35752098,35752204..35752422,35755372..35755467
,35755555..35755857,35755943..35755992,35756371..35756482,35756572..35756647
,35756757..35757052,35757131..35757240,35759087..35759184,35759269..35759300

Expression

GEO Profiles:Os02g0813800

Genome Context

<gbrowseImage1> name=NC_008395:35749418..35759741 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35749418..35759741 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcagagcaactgggaagcagataagatgcttgatgtgtatatctatgactatctgctgaagaggaacttgcagtcgacggccaaggctttcatggcggagggaaaggtcgccgctgatccagtcgcaattgatgctcctggagggtttctctttgagtggtggtctgttttttgggatatatttattgcaagaacaaatgagaagcattctgaggttgcagcggcatacctagaggcacagcaaatcaaagcgagagagcaccaacagcagatgcagatgcagcagttgcaactaatacaacacagacatgctcaactgcagcgaactaatgcaagtcatccttcacttaatggtccaataaacaccctaaattctgatggcattctggggcattcaacagctagtgttttggctgccaagatgtatgaagagcgcttgaagcaccctcaatccttggactctgagggatcacagcttcttgatgctagtaggatggctcttctcaagtcagctgcaacaaatcatgcagggcaattagttcccggaactcccggaaatgtgtctacaacgctgcaacaaatccagtctaggaatcaacaaactatggatataaaaagtgaaggtaatatgggtgttgcccaaagatctttgcccatggacccatcatccttatatggacagggtattattcagccaaaacctggattgggcggtgcaggactaaaccaaggagtaagcggtctaccattgaaagggtggccattaactggaattgaccaattgcgaccaaatttaggtgctcaaatgcagaagccatttctttcaacacagtcacagtttcaacttatgtcaccacagcagcagcaacaattcttagcacaggcccaagcacaaggcaatcttagcaactcaagtaactatggggatttggatccccggagatatacagcactaaccaggggtggcttgaatggtaaggatggacagcctgctggaactgatgggtgtattagttccccaatgcaatccagttcacccaaagttaggtcagaccaagagtatctcataaaggtacaacagacatcttcccagcaaccgcaggaacagcagcagcagcagagccagcaacaacagcagcagcaaagccagcaacagcaaatgcaacagagcaatagaaaaagaaagcaacctacatcttcaggagcagcaaatagtactggaacagggaatacagttggcccttcaaccaattctccaccatctactccatccacgcataccccaggagatggacttgggatgcctggcaatatgcgccacgtcccgaaaaatttagtgatgtatggtgctgacggaacaggactagcatcctcttcaaaccaaatggatgatctcgagccatttggtgatgttggctctttggaagataatgttgaatcattcttagccaatgatgatggagatgcaagggatatttttgctgcacttaaaagaagtcctgcagagcctaacccagcggcttcaaaaggttttaccttcaatgaggttaattgtttgcgcacgaacaatagcaaagttgtctgttgccatttttcttcagatggcaagatattggctagcgctggacatgaaaagaaggctgtactttggaacatggacaccttccagagccagtatacatcagaagaacacagcctcataattactgatgtccgtttccggcctaattcttcccagctggcaacatcatcctttgatagaactattaagctgtggaatgctgcagatcctggattctgtttgcatacgtttgttgggcataatgtccaagtcacatctttagattttcatccaaagaagacggaccttttgtgctcttgtgatggcaatggtgaaatccggtactggaatctgacccagcttagctgcatgcgtgccatgaagggaggtactgcccaagttcgattccaacctaacactggacagtttctcgcagctgctgcggagactatggttgccatttttgatgttgaaacgcacagcaaaaaatacacactacagggccataacacagatgtgcaatcagtgtgttgggacagcagtggggagtaccttgcctctgtcagtcaggacttggttaaggtctggtcaatatcatcaggagagtgcattcatgaggttagctccaatggaaacaagttccactcttgtgtgttccacccaagctatgccaatctccttgttattggaggctaccagtccctggagctatggaacatggtaaagaaccagagcatgacgatacaagcccatgaaggtctaattgcggccttggcgcaatcgccagtgaacgggacggtggcttctgcgagccacgacaactctgtcaagttgtggaagtaa</cdnaseq>

Protein Sequence

<aaseq>MAQSNWEADKMLDVYIYDYLLKRNLQSTAKAFMAEGKVAADPVA IDAPGGFLFEWWSVFWDIFIARTNEKHSEVAAAYLEAQQIKAREHQQQMQMQQLQLIQ HRHAQLQRTNASHPSLNGPINTLNSDGILGHSTASVLAAKMYEERLKHPQSLDSEGSQ LLDASRMALLKSAATNHAGQLVPGTPGNVSTTLQQIQSRNQQTMDIKSEGNMGVAQRS LPMDPSSLYGQGIIQPKPGLGGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQKPFL STQSQFQLMSPQQQQQFLAQAQAQGNLSNSSNYGDLDPRRYTALTRGGLNGKDGQPAG TDGCISSPMQSSSPKVRSDQEYLIKVQQTSSQQPQEQQQQQSQQQQQQQSQQQQMQQS NRKRKQPTSSGAANSTGTGNTVGPSTNSPPSTPSTHTPGDGLGMPGNMRHVPKNLVMY GADGTGLASSSNQMDDLEPFGDVGSLEDNVESFLANDDGDARDIFAALKRSPAEPNPA ASKGFTFNEVNCLRTNNSKVVCCHFSSDGKILASAGHEKKAVLWNMDTFQSQYTSEEH SLIITDVRFRPNSSQLATSSFDRTIKLWNAADPGFCLHTFVGHNVQVTSLDFHPKKTD LLCSCDGNGEIRYWNLTQLSCMRAMKGGTAQVRFQPNTGQFLAAAAETMVAIFDVETH SKKYTLQGHNTDVQSVCWDSSGEYLASVSQDLVKVWSISSGECIHEVSSNGNKFHSCV FHPSYANLLVIGGYQSLELWNMVKNQSMTIQAHEGLIAALAQSPVNGTVASASHDNSV KLWK</aaseq>

Gene Sequence

<dnaseqindica>9781..9924#9154..9351#8736..8852#8466..8621#8033..8182#7847..7956#7644..7785#7320..7538#4275..4370#3885..4187#3750..3799#3260..3371#3095..3170#2690..2985#2502..2611#558..655#442..473#atctggctccctctcttcctctccctccctccctcccttcgctcgctttctctctcctccccttccctttcctccccttccatctctctctctctttctctcatctcctcctcgcttcttctcaagcaaagctagcggcgagctcggagtagcggcgcgctctctcgtacgccaaccgcccggctcctcctcctcctccccttcgggaccccgtgcccgagctcgccgccgccgatcgggcattggatccttccaccaccggtgttcgttcgtagcggattttatttttgcggggtttctcggcatcccctgagtcgcgggatcgcgcccaatcggtaatgtgggctctgatcccttcgtttcacgcgaatttggggctcgattcgttgctgatttctgccgcgtttggttctggtcggtttaatctgtttttgcttgcagatggcgcagagcaactgggaagcagataagatgtaagctactacttggatgcgttttttgggtgactgtttttgttgtttggggttaattccttccttcccgtgctggttgtgcaggcttgatgtgtatatctatgactatctgctgaagaggaacttgcagtcgacggccaaggctttcatggcggagggaaaggtcgccgctgatccagtcggtaatcatctcatatccgctgcttctctagttgctgccccttttgtttttttgccgggtttttctctcgtttcaatctccaaagtaagtttgtggttacggtgatttgaggttttatgtggagtgtcagagttttgagattaaccagggcgaattctgggtttcgaactggaaggggagggccttctagtgctaaaatgatgaaggaaatttgaattttattttattcagggagtaattttcagccaaattagaacagagaactcggaaaattggaagaggtttgcagattttggggcaaaatttaggtatggaagctgaggataggcagagattcaagctaaaataggaggatattttgaaatttgttgatagtaacttggagaggctcgtttatttatttatttatttatcctgagatggcagacttgaggctacttgtgtacatggtataatttccactgtatgtattctgctagctatgtaaatcgacctattgttatcaagtggatgagaggatggcgtgattgtgttgatcgcttttttcatgctctcaagcatgctgggttttgaggaaggtggcaattatttgtttttgccgtgcattgtgtaactatttctatttttgcagtgatttcatttgttgagattatttagttgaattgaagcataatcaattcgatatcctgaatgcaatgttacattgactgataatggtagcatttgtagtggataagtacatgggtgctatatatggatttgcagtacatgcaaaggagaaggcgggaagctacattgcttatttggttgcggttgtgttcatatatctagcacaatgtatcttgacatttatagccactaatgaaccattaatgtggaattgaactaaacttagtatattcagtgcaaaaccgtgctgttgcaatttgtgtgttgtggggcctgtctagattcgtagtactaagatatgtctaatccggctttaggttgctatattttgggacgaagggagttcctttatagttctgcgtatcgcagtaggtactattagtgataccagcaaactggactggaacacattgtcaaacacaggaattgaactaaacttggtaaatggaatgcaaaactgtggcattgccctttttaactttgaaatgaatttcttccttgctaaaacctgtcatatgagaaacggctaattggtaaccttctgtctttgtgggcattatccgagtgataacgtgtcatgtctcatccttccataatgtttgactctaattggttttcccgtcctaaatggttcttcagctcttctatgtggatgacatattgcgaccgctaagatccctaacactttgagaaatgataccatcacttttaagtcccaaatcaacttcttgattactgaaacctggcaagttagaaaggggtaggtcgacggtgtataagcgaggcagccctgtgggcggaaattctaaacgctgaagatagaactgtagtttccttgtggaaaggaattttctcttcccctctacgaattctaaatcttatgtaattctctgtgtaaaccttctaaatgtttgcaatgacaaaattcaggtggggaagctctccccctggtgatttagtcaaaaaaaagaaagaaaggggtaggtgagtttttttgccttgctgggcagagtatatctccaaagattccaaatacccttccttacagaagatctttaacgttaatgcaaaaataactagacgtatatccactccaagaagttctgcatgtggtttcctggtagagacccttccttttacctgttcaagaatcatgattgtaaattcttctcatgcagcaattgatgctcctggagggtttctctttgagtggtggtctgttttttgggatatatttattgcaagaacaaatgagaagcattctgaggttgcagcggcatacctagaggtatcctgggaattttttaagtcgccatgcatctattactcttgatctgatccacgtgtatttctgtcggaaacataggcacagcaaatcaaagcgagagagcaccaacagcagatgcagatgcagcagttgcaactaatacaacacagacatgctcaactgcagcgaactaatgcaagtcatccttcacttaatggtccaataaacaccctaaattctgatggcattctggggcattcaacagctagtgttttggctgccaagatgtatgaagagcgcttgaagcaccctcaatccttggactctgagggatcacagcttcttgatgctagtaggatggctcttctcaagtcagctgcaacaaatcatgcagggtgattctcttttagtttttgataagcttttatataagagagagatgggagaaattgaattttgatatgttactggcatgatcactaatcatatatcttaatctcataggcaattagttcccggaactcccggaaatgtgtctacaacgctgcaacaaatccagtctaggaatcaacaaactatggtgagttgttgcttcttgtgctcatcttgtgtcattttgtttgctccattaaaatgtaaaagtaaaaagatagatgttctttccaacaggatataaaaagtgaaggtaatatgggtgttgcccaaagatctttgcccatggacccatcatccttatatggacagggtattattcagccaaaacctggattgggcggtgcaggttagtcctttcctatgtatattgtgaggtcacttttgttgctaaagtgaaactgcaataatgtggagttacttgccttctctaacaacaatcgatttactagtctgtcattcttgtaataacagtaacatctaaggttgcgaatagtaaatataaattgccaaaacaaatggatattaaacaagtactgaattaattattatgctgtttctggttggcttttgtggtgaatattgcatggatatatttctagtctaaaaagcaaatgttgttgttctcaatgtagaaaaccatcctgttctcgttttgtttgttctgattttttggatgtcctttttgtttgtcaattgttgaaatttcttcttctgctgttaacaggactaaaccaaggagtaagcggtctaccattgaaagggtggccattaactgtaagttcatttatctattgtcccctttcttcatgtttttattactatctaatcaccaattaatgccagtgctgccatcctacagggaattgaccaattgcgaccaaatttaggtgctcaaatgcagaagccatttctttcaacacagtcacagtttcaacttatgtcaccacagcagcagcaacaattcttagcacaggcccaagcacaaggcaatcttagcaactcaagtaactatggggatttggatccccggagatatacagcactaaccaggggtggcttgaatggtaaggatggacagcctgctggaactgatgggtgtattagttccccaatgcaatccagttcacccaaagttaggtcagaccaagagtatctcataaaggttggtttatttttggaagcgcacttctgtttgtgttttcattgtctctagtgttcaaccatctgactgtacctgcaagttattcaggtacaacagacatcttcccagcaaccgcaggaacagcagcagcagcagagccagcaacaacagcagcagcaaagccagcaacagcaaatgcaacaggtactgacaattcgcccaggcttaacctctggatttgttttcttttcttgaaagttagcagatgtgtgcatatattgctgcaaacttcaaactttaaatctgctcaacaaaacatcactttgtgcctctacaattgcacttttgcaagcaaattaagcatagtagtttattatgagtgagttagatgtactgattgttcatagctgaataaaaaaaatgatgtttgaggctccgttgggcactgcattggcttttctcaattggatcgaaggagttagttagaggtgtttaaattagagacgtgaaagaaaatgttactgggatcagcaaagattctcctaaccgactagatccctaagcacaggaatagcaaccacaaactaactataaagcccaaagactattttctgttggcgatgtcctgcagctttctgattcttttctatagatcttgtgaattatagtttagttagatgtattgtgtgtaataggaatcatattgttaatcttggggtgataagactagattttgtgttgatcattcgctgcagcctttgtattgttttctatgatttttttggtcaatgggtttctttaaaaacaattccaagggtaagatcgcgtaaaggcaatattgaggacagcagaatgactgggatataaaattggtatgccagattattgtagttacacacatccaatattaattacagtttcatggctttttttttttgtgaacatgcaatagctttgcatgtcaatatattagacgaagattaatacaactgtggtgcgcctcaatggctactggggtggcagggagaggagctagggaaatacactaacaacaaaggagaactaaactaagagctgaactccaaagcagaaggtaggcaaggaaaacaaaacgggctaagctatgtgctgaacaaagctcccacagggttagcggtcgctgccacccactgtcatcctatttgctatggatgacgtcttttttttttctttttacctgtctactaaaagtcgacagattttgctcctgttttctctttggcatatacaagagaccaatttgtcatacaacctacatatctatttatctactatattattaaaacaaccttgaaataaggcaccaagtccgttgtaggggctagaaattcccacattaatcggagaaaaagaaaagaagagtccaaatagaaatacaatttaaaaatagctgaaattcggaattaaaaataagtaatattgaaagaagaatccatataataacccaataagagattaatcaaaattcggaataaaaataaaataaaatgcgaaattagaaaagaaagaagagtccaagtaggaatacaatttaaaaataacagaaattcggaattaaaaataaggaatattgaaagaagagtccatataagaacccaatacgagattaattaaaattctgaataaaaataaaattaatcctaaattagaaaaaaaaaagaagagttcatgtagggatacaatttgaaaataactaaaattcgaaattaaaaataaacaatattgaaataagagtccatataagaaaccaatactatattaattaaaattgaaaataaaaaatcaaataaaatccaaaattggaaaaaaaaagagagttcaagtaggaatacaattttgaaacaattgaatttggaaataaaaaaataataaatattaaaagaatagtctatatagaacacaatacgagattaattaaaattcgaaataaaaaataaaataaattcagaaaatagaaatagaaaaataatagctcaactagaatacaatttataaataattaaaatttgtaataaaaaaataaagactattgaaataagagataatctagaacacatgacgagattaattaaagtttggaataacaaataatttatgaataagataaattcagaaaatagaaatagaaaaataatagctcaactagaatacaatttataaataattataagagttcaagtaggaatataatttatgaataaaaattatcggttgatgggatatctaaaaactataaacaaaaccccaaatagaatcccaatgacgtttaagaggagcgacgatgggcatgccgttaagtagcgtggtcacgacagttggcgggacttatggagagtaaaaataaacccaaaggataatcatgttcgatttttaaaatctcaatgacaataaggaggggaggcagcgggcaggctgtagtctgtagaggtgtataggggcgaagccactaacgatctggcgagacttatagaaagtaagaaagaacataaacaataattatgttcgacttttaaaatcccaatgataataaagagaggtggcagcggacgggccatagagtagtaaattggcgatgtttgacaatacttctaaaaattatgaaaacgagacctaacaagacaatgaactctaaaaactataaggcctaaattttaaagttctaaagatgatgaatagaagtagtggtagatcgagtaagcaaataaaaaggtgtcaaaggagtaagaggtagcgactgatgtgacttttaagaactatgaaattattagaatcacgggaatgatagttttaaataaaatcatgtgtaaaaatagattattttaaattgatgctagttgcgcaattgcgcgggttgcccaactagttttttgaaagtagaacaccatcacataaatttggatgctttaatacacgtttctatatttttaggagctacatgtgaatttttcaggggatacatatgaaacggtcacagggaaaactaatttaagttttgaaccatggctaactggctgcgtgtatgttttccaaattttcattttgcttattttcacatacttatcccttaccatatatccatttttttgttctacaattattattatttatctccagagcaatagaaaaagaaagcaacctacatcttcaggagcagcaaatagtactggaacagggaatacagttggcccttcaaccaattctccaccatctactccatccacgcataccccaggagatggacttgggatgcctggcaatatgcgccacgtcccgaaaaatttagtgatgtatggtgctgacggaacaggactagcatcctcttcaaaccaaatggttacaggcttacaacttttctcatttcattcaagatgtttagttggatgtatgtaacgattatttgtgtcagatgataagcatcgtattttctgtacttaacaggatgatctcgagccatttggtgatgttggctctttggaagataatgttgaatcattcttagccaatgatgatggagatgcaagggatatttttgctgcacttaaaagaagtcctgcagagcctaacccagcggcttcaaaaggtaataccctgatgttttccgtattctgtaaacatgaaataacacaccttttggtttttaggttttaccttcaatgaggttaattgtttgcgcacgaacaatagcaaagttgtctgttgccatttttcttcagatggcaagatattggctagcgctggacatgaaaagaaggtatcagtaaatggacttcattttacactgctggtttttgtgggtttagtatggtaacttgtttgttgtctcttaggctgtactttggaacatggacaccttccagagccagtatacatcagaagaacacagcctcataattactgatgtccgtttccggcctaattcttcccagctggcaacatcatcctttgatagaactattaagctgtggaatgctgcagatgtaagttatgtttttgtatatgtatatgaaagtggcataggagattattcttcctggagcaatggtacccacaattagtgacatgcactttcttttaatgcactggtcattgcaataaaattttcacaaatataccatatcactaatatctgacagcacaaagtatatatttgtggtcacgattattagttggcattgagagttgagtatgtccaacctattaatctgaagttccgtatatgtacttgcatttaattttattatgaaaattgttgttttgcagcctggattctgtttgcatacgtttgttgggcataatgtccaagtcacatctttagattttcatccaaagaagacggaccttttgtgctcttgtgatggcaatggtgaaatccggtactggaatctgacccagcttagctgcatgcgtgccatgaaggtttgccatcttctttttgtttgcttaagacgttttcggcaccttttgtcttatgaagaattcatggtttgtatggtctaggttcatccatctgattctgtttttgttggacagggaggtactgcccaagttcgattccaacctaacactggacagtttctcgcagctgctgcggagactatggttgccatttttgatgttgaaacgcacagcaaaaaatacacactacaggttctgttcttgaaaatcaataacacatctatgattcagcactgtttgttgtgtaacccgcagtggatgttttcagttatttttgtcttttcctgtagctgaactagctttttcttaatggaaaggggaggagctattgctcttctgttttttttttaaaaaaataaaaaatctatgattcaaaacatgcacatctttatttccatgttttgtagtatacctcttgtttcagaaggggtgggaacctgttgtttatccttttttgcctgtgatcttgtatctgaagtctttattatcacagggccataacacagatgtgcaatcagtgtgttgggacagcagtggggagtaccttgcctctgtcagtcaggacttggttaaggtctggtcaatatcatcaggagagtgcattcatgaggttagctccaatggaaacaagttccactcttgtgtgttccacccaagctatgccaatctccttgttattggaggctaccaggtaactactgattttctttcagtttagccatatgtatgtaaaatttaccctttttttccctgaaagatagggagagacatgtttctaacaatcaattttagacatgattccttttttttttcatcttgcaacatcccatggtcatttttaacaacgctgctggtttaccaacgccacaaaaaactatcctagtgccagacctgccagtgacgcaatttcttgccatatcccacgttatgcagtggcatttcattttttggcattgagttctccgccacaagaactgtggcatggctctcatcagaatgctgtaatatccaagccaaggcatagtctgatatttggtttggaatctgagaatcgttacttctgatgaacactctgtaccttgtttgctgtaaatttctcatggacactgtaacaatgcagtccctggagctatggaacatggtaaagaaccagagcatgacgatacaagcccatgaaggtctaattgcggccttggcgcaatcgccagtgaacgggacggtggcttctgcgagccacgacaactctgtcaagttgtggaagtaacaacaataacgtacctagagataagaatagctgttccaggtaattgatactggatttcttcagcctaggctagtcatagaatggaggtgagtttgatgtactggttgagttgtgttactatctcagaggcaaataaggaagagtaggagccgggcgattgtcgcggttgagctgttcagtgcgtattgcagtgagtttgtgggaggggctgtttctttttttttttttttttttaccttgatgatagatgttgatgtagcacaaaaggaagataaggaacgaaggcctaaagttggctctctgtttcatgttgttaatgttctagtatgagatgtaaaatgtaacaatattcggtgttttaatgggaactcgctgcaatttgtccggcggttgatagatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0813800, RefSeq:Os02g0813800