Difference between revisions of "Os03g0100400"
(Created page with "{{JaponicaGene|
GeneName = Os03g0100400|
Description = Similar to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair prot...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0100400| | GeneName = Os03g0100400| | ||
Revision as of 19:26, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0100400 |
|---|---|
| Description |
Similar to DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) |
| Version |
NM_001055180.1 GI:115450088 GeneID:4331279 |
| Length |
5326 bp |
| Definition |
Oryza sativa Japonica Group Os03g0100400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:44762..50087 |
| Sequence Coding Region |
44806..45689,45826..46055,46962..47071,47381..47545,47672..48463 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:44762..50087 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:44762..50087 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcctggtggtggtttcgtgtggcctcccggtggcctccctggcgtccgccgtcctcctccagctcttccaccaatcccccgacgatggctgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcctcctcctcaactcccagagccagcctcctctcttgcagctgcaggtccacgacgtggcccccgacctccccgcccaccaccgcgtcgccctctacgcctcccgcgccgcgctcttcctctccccccgcgccctcgtcgccgacttcctcacctcccgcctcctcccctcccgcgtccgcgccctcctcctcctctccgcccaccgctcctccgacacctcctccgacgccttcgtggctcgcctcctccgccaccaccacctcctccctgtttatgccttctccgatcgcccccatgccatggtctccggcttcgccaaggcggagcgcgctatgaagagcctctacattcgacgcctccacctttggccccgcttccaccttcttgctgccgctgacctcgagcgctccccgcccgaggtcatcgacgtccgcgtccccatgactcagcctatgaggggcatccaggccgctatcctcgatgccatggacgcctgcctcaaggagctcaggcggaccaacaaggtcgacgtcgaagacctcaccgtcgacaagggcctcttcaagtcttttgatgagatcgtcaggaggcagctcgaccccatctggcacacgctcggcaagaagaccaagcagctcgtcgccgacctcaggacgctacgcaagctgcttgattatcttgtcaggtacgatgctgtgacataccttaagtacctggacacactcagagtatctgaaggcgtccgatctgtttggatatttgctgactcaagccacaagatattcgacctttcaaaaaggcgtgtctaccaggttgtgagagcagacggtacaaaggttgcagcagacaacaagggcacaccaacaaagaagaggaaggtggcacgcgctagcagcaggaaaggaaaagaaactgaaaatgagggttccagtgataacaaggacaatactcagaaggttaatgcagagatgggcattgtagtggaggagattttagaggaagcacctaaatggaaggttttacgggaactattgcaggagatagcagaagaacaggcaaagggagatggtgacaatgtaaaccctgttcatgaagacggaattaacgagagtggcatagttttggtagcatgcaaagatgagcgctcatgcgtgcagctgcaagaatgcatatcaaaaggctcgcatcaggtcatgcgggccgagtgggagaagtacttgcttggcaaagctgaactgcatggattgcataggaagaacaagaaaacatctcagcaactaaaagggtttggtgttctggatggggaagttcctatgaggtctggtgagagtgcaggtcctgttagcattagcaaggttgaggctaatgccttacttgcggctgcctctgaaataagcactgtaactaaggaagcaaatcttgctgatgattcaaatgtcagctgcaagaagagatcattcggaaaagggaaagggaaagggaaatttaagaaaaccatggcaaagagagaagccagtaagttgagaaacagaaatactacagaacatactgatttggaagttgaaggtcaatcaggaaaaacagatgaacaggctgagactgatgcttgtaagttgtctgcagaagatgattctgcatcagctccagctgttgacaaagctgctaacaatttatctgcttttggagactctgtggataccgaaccactacctcctgtgcaattttacgccctagacagtgatcagcatgtacttgatgtatggaaaccttctgtaattatcgtttatcatccagatataacatttgttagagaaattgaagtatacaaggcagaaaatccatcgatgaagttaaaagtttactttcttttttatgaagattctgccgaggtacaaaaatttgagtccagcattcgccgggaaaatgaagcatttgaatctttgatcagacagaagtcgctgatgatgatacctgttgatcagaatggccgttgcattggaccaactcttgcaaatgaaccagaagctcttttatctcaaaattcactaacaagaaaggcaggtggtagaaagccactagagaaggagatgcaggttattgtggacatgagagaattcatgagcagtcttcctaatgtattgcaccagaaaggtattcgaataatacctgttaccttggaagtcggtgactatgttctttctcctttgatctgtgtcgaacgaaaaagtattgcggacttgttccaaagctttgcttctggtcgtctctacaatcagattgaaaccatggttcggtattacaagatcccagtgcttctgatagaattctcacaagacaagagcttttcctttcagtctgcaagtgaaattggggatgatgtatctccgacaaatataatctcaaaactttcattactagtcctgcattttcctcggcttcgcatagtctggtctcgcagcttgcatgccacggcagatatattcctatcactcaaaacaaaccaggatgaacctgatgagagcaaggcaatgagagttggtgtgccctctgaggacggagttgtggagaatgacgtgagggctgaaaattacaatacgtccgcgattgaattcttgaggaggcttcctggtgtgacagattcaaactatagaagaataatggaggaatgcaatagcttagcagagctggccctgcttccggtagagcggctgtctgagttgatgggtactcagaaaggggcacgcatgctcaaggaatttctcgatgccaagtgtccaactatgctctag</cdnaseq> |
| Protein Sequence |
<aaseq>MLPFEEQVVADLLEDPNGGLVVVSCGLPVASLASAVLLQLFHQS PDDGCFLILSAPEPVKAQIRRRLLLNSQSQPPLLQLQVHDVAPDLPAHHRVALYASRA ALFLSPRALVADFLTSRLLPSRVRALLLLSAHRSSDTSSDAFVARLLRHHHLLPVYAF SDRPHAMVSGFAKAERAMKSLYIRRLHLWPRFHLLAAADLERSPPEVIDVRVPMTQPM RGIQAAILDAMDACLKELRRTNKVDVEDLTVDKGLFKSFDEIVRRQLDPIWHTLGKKT KQLVADLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVRSVWIFADSSHKIFDLSKRR VYQVVRADGTKVAADNKGTPTKKRKVARASSRKGKETENEGSSDNKDNTQKVNAEMGI VVEEILEEAPKWKVLRELLQEIAEEQAKGDGDNVNPVHEDGINESGIVLVACKDERSC VQLQECISKGSHQVMRAEWEKYLLGKAELHGLHRKNKKTSQQLKGFGVLDGEVPMRSG ESAGPVSISKVEANALLAAASEISTVTKEANLADDSNVSCKKRSFGKGKGKGKFKKTM AKREASKLRNRNTTEHTDLEVEGQSGKTDEQAETDACKLSAEDDSASAPAVDKAANNL SAFGDSVDTEPLPPVQFYALDSDQHVLDVWKPSVIIVYHPDITFVREIEVYKAENPSM KLKVYFLFYEDSAEVQKFESSIRRENEAFESLIRQKSLMMIPVDQNGRCIGPTLANEP EALLSQNSLTRKAGGRKPLEKEMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDYV LSPLICVERKSIADLFQSFASGRLYNQIETMVRYYKIPVLLIEFSQDKSFSFQSASEI GDDVSPTNIISKLSLLVLHFPRLRIVWSRSLHATADIFLSLKTNQDEPDESKAMRVGV PSEDGVVENDVRAENYNTSAIEFLRRLPGVTDSNYRRIMEECNSLAELALLPVERLSE LMGTQKGARMLKEFLDAKCPTML</aaseq> |
| Gene Sequence |
<dnaseqindica>45..928#1065..1294#2201..2310#2620..2784#2911..3702#3969..4079#4174..4434#4654..4877#4974..5184#cctcctcactcggaaaggaaaagagcgccgccgccgccggcgtgatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcctggtggtggtttcgtgtggcctcccggtggcctccctggcgtccgccgtcctcctccagctcttccaccaatcccccgacgatggctgcttcctgatcctctccgcccccgagccggtcaaagctcaaatccggcggcgcctcctcctcaactcccagagccagcctcctctcttgcagctgcaggtccacgacgtggcccccgacctccccgcccaccaccgcgtcgccctctacgcctcccgcgccgcgctcttcctctccccccgcgccctcgtcgccgacttcctcacctcccgcctcctcccctcccgcgtccgcgccctcctcctcctctccgcccaccgctcctccgacacctcctccgacgccttcgtggctcgcctcctccgccaccaccacctcctccctgtttatgccttctccgatcgcccccatgccatggtctccggcttcgccaaggcggagcgcgctatgaagagcctctacattcgacgcctccacctttggccccgcttccaccttcttgctgccgctgacctcgagcgctccccgcccgaggtcatcgacgtccgcgtccccatgactcagcctatgaggggcatccaggccgctatcctcgatgccatggacgcctgcctcaaggagctcaggcggaccaacaaggtcgacgtcgaagacctcaccgtcgacaagggcctcttcaagtcttttgatgagatcgtcaggaggcagctcgaccccatctggcacacgctcggcaagaagaccaagcagctcgtcgccgacctcaggacgctacgcaagctgcttgattatcttgtcaggtctgctcatccactccataccttcacctatcattctgctccattaagctgttgatgattattccttcctggatggcatgaatcgcacacaaaaattctcttattcaaataataaaacttcttaggcattctctaggtacgatgctgtgacataccttaagtacctggacacactcagagtatctgaaggcgtccgatctgtttggatatttgctgactcaagccacaagatattcgacctttcaaaaaggcgtgtctaccaggttgtgagagcagacggtacaaaggttgcagcagacaacaagggcacaccaacaaagaagaggaaggtggcacgcgctagcagcaggaaaggaaaagaaactggtagcggctaccggccatttcctttcaatcgcaactaatgccttttcttaaagaatttagatataggcctcttaatttcatgaaaaaaataaatattttccactcaataggagtggctttaacgactttccactgcatagatactaattaattatttgccactccatagacagtcttaatataagatcttcccagtcattttctttgcgatcaccccaaaacaaaacgcagtggccacctatcttgttgctttacgcctcctctaaccagacttggtctggtcaaataagctcaagcagagctgatcaggggacatgccacttatcttcttccctgacttctctatccaagcgacaatacaggcgacatggcacgccggcgccggcaccgccaaggaaggtgcactagcaggggagccattagcaagttggatcctggagccatccccaatccccctttttggagtaaatttgcacaaaatcaaagaagtagcttcttctttcatctactcagcatcatccttgggtcgcatgaccactgttttgcagtttgcacaatcatctgcactctccactagttcacatgtcccctgcatcttctagccaggagcaatgtgttggagtcagcgacgctggccactgctggtcactggaccatgaggcggcggcactgctgcagttgaagcatcccggcactgtctaatcagaggcaaggaagggaggggtaattttggaagaagaatatgtgtgcctggcatttagaggggaagttgcagagaaagtggcatttcataaagctcatgtgtctatcgggtggcaattaattaactgacatctgttgagtggtaaatgttagagccacatctattgagttcacatggttaaattccccatttatttcctgtagaaaatgagggttccagtgataacaaggacaatactcagaaggttaatgcagagatgggcattgtagtggaggagattttagaggaagcacctaaatggaaggttttacgggtgagtgaccctgggtctgtttcctggtgttctttcaggcagcactcagcattaaatatgtgcttcatttgtaatggagaattctcctttaaatctagttggcggaaatttttgcttttgtgcccagctatttcttgtaaataatgtattgagaatatatatatgcaacccacccttttctgttcttttatcaactttccctgtacctaccaaataatacaggtaggttattattaatcaaggaaactccgtgcttgtccacaaattacgaataatgtgtaaactgatttactatacatatctttgcaggaactattgcaggagatagcagaagaacaggcaaagggagatggtgacaatgtaaaccctgttcatgaagacggaattaacgagagtggcatagttttggtagcatgcaaagatgagcgctcatgcgtgcagctgcaagaatgcatatcaaaaggctcgcatcaggtaacagttgaagtataatgtagttagcaacatagcatcaatcaacatcttaaatgcaagttttactttgatatatttaaaactaaaccatattaatccttcacacgcttccttgtttttaacaaggtcatgcgggccgagtgggagaagtacttgcttggcaaagctgaactgcatggattgcataggaagaacaagaaaacatctcagcaactaaaagggtttggtgttctggatggggaagttcctatgaggtctggtgagagtgcaggtcctgttagcattagcaaggttgaggctaatgccttacttgcggctgcctctgaaataagcactgtaactaaggaagcaaatcttgctgatgattcaaatgtcagctgcaagaagagatcattcggaaaagggaaagggaaagggaaatttaagaaaaccatggcaaagagagaagccagtaagttgagaaacagaaatactacagaacatactgatttggaagttgaaggtcaatcaggaaaaacagatgaacaggctgagactgatgcttgtaagttgtctgcagaagatgattctgcatcagctccagctgttgacaaagctgctaacaatttatctgcttttggagactctgtggataccgaaccactacctcctgtgcaattttacgccctagacagtgatcagcatgtacttgatgtatggaaaccttctgtaattatcgtttatcatccagatataacatttgttagagaaattgaagtatacaaggcagaaaatccatcgatgaagttaaaagtttactttcttttttatgaagattctgccgaggtacaaaaatttgagtccagcattcgccgggaaaatgaagcatttgaatctttgatcagacagaagtcgctgatgatgatacctgttgatcaggtggtgtaccactctgctaaaattcgttaaatcatcaaggattaatttcagcttgatccttgcgtaatgttcactagtatatgaatgcagacatactatgcttgattaaattactattacactttttatctaatctacatgtgaacctcatattgtacttatcttagctgtcagtcaaccttatgtgagcaaaagtgccggtgtgcacatggagaaaattccatatatttccctgatacatgaaagcacatctgtcttcttttcagaatggccgttgcattggaccaactcttgcaaatgaaccagaagctcttttatctcaaaattcactaacaagaaaggcaggtggtagaaagccactagagaaggagatgcaggtgatgcttccgtccattattttgactaaggaacaatattatttgcttttactggctgaattgctgagatgtttattgttgcatatccttctaggttattgtggacatgagagaattcatgagcagtcttcctaatgtattgcaccagaaaggtattcgaataatacctgttaccttggaagtcggtgactatgttctttctcctttgatctgtgtcgaacgaaaaagtattgcggacttgttccaaagctttgcttctggtcgtctctacaatcagattgaaaccatggttcggtattacaagatcccagtgcttctgatagaattctcacaagacaagagcttttcctttcaggtaccccctcgccctcctctgccatgcattttcttttcatgctactatttgccaatttggtaggatattcgttcttagatggatggtatcttgctccctacaaacagccatcccatgttgtctttcgatcttgagcaaattttaatccatttccgactatgtgctattttatattggttttcgtgttcaaaggtgctgaatggtctgtttatttttcagtctgcaagtgaaattggggatgatgtatctccgacaaatataatctcaaaactttcattactagtcctgcattttcctcggcttcgcatagtctggtctcgcagcttgcatgccacggcagatatattcctatcactcaaaacaaaccaggatgaacctgatgagagcaaggcaatgagagttggtgtgccctctgaggacggagttgtggagaatgacgtgaggtaagttgtttttttttgtatttggtaacggcataacgcacgcggaagcatacttatatctgatctactctcctcggtaaaatatgttttcgtcagggctgaaaattacaatacgtccgcgattgaattcttgaggaggcttcctggtgtgacagattcaaactatagaagaataatggaggaatgcaatagcttagcagagctggccctgcttccggtagagcggctgtctgagttgatgggtactcagaaaggggcacgcatgctcaaggaatttctcgatgccaagtgtccaactatgctctagggctgtgtaatcttgtttgtaattgttgaaaatgatcaataatgaacttattattctacttagtaaaaccgattttaagatgtggatggtgaagagtgatgaatgtacaacccttactagaaagcttgggtcactcggtcgc</dnaseqindica> 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| External Link(s) |
