Difference between revisions of "Os03g0100500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0100500| Description = Similar to TAR RNA loop binding protein (TAR (HIV) RNA binding protein 1)| Version = NM_001055181.1 GI:115450090 Gene...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0100500|
 
GeneName = Os03g0100500|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0100500

Description

Similar to TAR RNA loop binding protein (TAR (HIV) RNA binding protein 1)

Version

NM_001055181.1 GI:115450090 GeneID:4331280

Length

1406 bp

Definition

Oryza sativa Japonica Group Os03g0100500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:62468..63873

Sequence Coding Region

62468..62582,62830..62981,63056..63126,63214..63370,63520..63687

Expression

GEO Profiles:Os03g0100500

Genome Context

<gbrowseImage1> name=NC_008396:62468..63873 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:62468..63873 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caagatgtgctcaattttcagaagaaaatcacaccctataggaactttgatcaaccattaaacgttggtggtcattcagttgttggcgatgactatatttcaagattacttttagatctagagggagatgaccagcagttggatttagcgctagaatcaagaaatcacgctgtggaaactatcaagcaaagccagcagcaattaatagtagtagcatcattggtagatcgcatccctaatcttgctggactgacaagaacatgcgagatattcaaagcagttggattggccgttgctgacaaaagtattatcgaggacaagcagtttcggttgatcagtgtgacggcggagaagtggttgcccatgatggaggttccagtgaatagcgtcaaagtgttcttggagaagaagaggctggaaggctattccgtgatagggttggagcagacggccaacagcaagccactggaccacttctcttttccgagcaaaacggtgcttgtgctgggacgggagaaggaaggcatcccggtggatatcatccatgtgttggacgcatgcgtggagatcccgcagctgggcatcgtcaggtcactcaatgttcatgtcagcggtgccattgccgtgtgggaatacacccgccagcaacgcatcgcaacttaa</cdnaseq>

Protein Sequence

<aaseq>QDVLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLLDLEGDD QQLDLALESRNHAVETIKQSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAVADKS IIEDKQFRLISVTAEKWLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDHFS FPSKTVLVLGREKEGIPVDIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI AT</aaseq>

Gene Sequence

<dnaseqindica>1..115#363..514#589..659#747..903#1053..1220#caagatgtgctcaattttcagaagaaaatcacaccctataggaactttgatcaaccattaaacgttggtggtcattcagttgttggcgatgactatatttcaagattacttttaggtatgtaaagcatccttgcaattttactattactcctttcttcacattccctcccaaaatagcttgcaagatggatttgcacaggcttgttactttcattgcgcttggtgtgctaagtttttatgtaatactaagtcattttgaagagctaagctgcggatgctcttattatctacaaactgagcttttgtttttgctccctacgctatttcacttgtccatgtgctgtcttgtttgctgggtgcagatctagagggagatgaccagcagttggatttagcgctagaatcaagaaatcacgctgtggaaactatcaagcaaagccagcagcaattaatagtagtagcatcattggtagatcgcatccctaatcttgctggactgacaagaacatgcgaggtatatatcggtataattcctgttattatccctgaaacgtgcatgatataatggtattaggtttttggtgacagatattcaaagcagttggattggccgttgctgacaaaagtattatcgaggacaagcagtttcggttgatcaggtatgtatatggctggcagatgtatataggtgatgatgatttatttgtgtttctctgacttggcatgcaaatatgcaatgcatgcagtgtgacggcggagaagtggttgcccatgatggaggttccagtgaatagcgtcaaagtgttcttggagaagaagaggctggaaggctattccgtgatagggttggagcagacggccaacagcaagccactggaccacttctcttttccgagcaaaacggtatataattagaagatccaaatccccccctctctctctctctctctctctctctgtgtgtatgtgttatgtttgcattactgcacataggaggagggaaaaaatcatacaaaaaaagaactaacaaggaaaatatatttattgacaaggtgcttgtgctgggacgggagaaggaaggcatcccggtggatatcatccatgtgttggacgcatgcgtggagatcccgcagctgggcatcgtcaggtcactcaatgttcatgtcagcggtgccattgccgtgtgggaatacacccgccagcaacgcatcgcaacttaatttctgtttgagcagaaatcaacttaattttctcaaagctgttccttgttactagtactcctactccatagtggagtctgtattatatgtattcatcaatcggttagaactagaaacaaatgagagatgatagtactccacttgtcttgcccgtacatacagcacaactctactgtcctgacctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0100500, RefSeq:Os03g0100500