Difference between revisions of "Os03g0102400"

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(Created page with "{{JaponicaGene| GeneName = Os03g0102400| Description = Conserved hypothetical protein| Version = NM_001055197.1 GI:115450122 GeneID:4331297| Length = 5250 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0102400|
 
GeneName = Os03g0102400|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0102400

Description

Conserved hypothetical protein

Version

NM_001055197.1 GI:115450122 GeneID:4331297

Length

5250 bp

Definition

Oryza sativa Japonica Group Os03g0102400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:148227..153476

Sequence Coding Region

148650..148709,149000..149074,149343..149408,149737..149793,150422..150537
,150821..151103,151413..151468,151585..151682,151776..151813
,151910..152024,152233..152291,152436..152469,152745..152818
,152892..153077,153174..153338

Expression

GEO Profiles:Os03g0102400

Genome Context

<gbrowseImage1> name=NC_008396:148227..153476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:148227..153476 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agggaggggaggggggcgatcgaccagaccaccatggtgcgagcagcgtcaggggcagatccaccaccattcctccaaacacgcatggtggacatgccctcctcctcctcctcctcctcctcttccctctctcaatctcaatctcaatctcactcccactctcagactcacaaggagaaggagaaggagaaggagaaggaggaggagcaggaggaggagaagccctccccctcccgtaacgcctcctccaagtacgacttcgtcaaggtcaaggtgtggcttggcgagaatgccgatcactactacgtcctctccaggttcctcctctgcaggatgctcaccgtcaccaagattcctaatcatgttgccattaagattgcccttgaactcaagaaattgcttgtcgacaacagcctccttgatgtttctcagagtgacttagaggctaacctatttaagctcatggagaagcggggatacggcgaggattatattaatcggtataaaatgatgaccagattccatcatcaaagagtaccactagtagttttagtgtgtggaactgcttgtacgggaaaatcaacaattgctacgcaactagctggaaggctgaatttaccaaatgttttgcagacagacatggtgtatgagttgctacggacatcaacagatgcccctcttacttcggtgcccgtgtgggctcgggattttgattctcctgaagagcttatcacagagttctgcagagaatgcagagttgttcgcaaaggtttggctggtgatttgaagaaggccatgaaagatgggaagccaattatcatcgagggaattcatttggatccaagtatttatttgatggacgaggaaaagagagatgataattccaaaatggagaagaaggtagctgaatctgaaaattcaccagcaactgtaaagagcaagacagaaaagcaacaagaaaacgaactacatgagaagagaatggatgacagtcaggagtgcatgtctgaggagggtagaataagtgaagggctatcttgtgctaaaagccacgtaattagctcttctgatcctgcatgttctaaagagaaaaatcccagagctgaaggtgaaggacataaggatttggacctacagaaaaacaacgccaccaagaaggacaaacctgctgctaaaccaataatagtcccaattgtgttgaggatgtctgattttgatcacaaggcattgttagaggaatggatagccaccagggcttccagggataattgtcttcctcaggatcatcgaaagcttataaacaaccttaagcttattcaggactatctttgttcttttgaatcacagggattgaccgttgttgacatttcagcgaactcattccctcagacactagattggcttcacagctatcttcttcagtgcatcgaacgtggccttttggctgcatgttcagaaagtcccaagcaaggtgggagctaa</cdnaseq>

Protein Sequence

<aaseq>REGRGAIDQTTMVRAASGADPPPFLQTRMVDMPSSSSSSSSSLS QSQSQSHSHSQTHKEKEKEKEKEEEQEEEKPSPSRNASSKYDFVKVKVWLGENADHYY VLSRFLLCRMLTVTKIPNHVAIKIALELKKLLVDNSLLDVSQSDLEANLFKLMEKRGY GEDYINRYKMMTRFHHQRVPLVVLVCGTACTGKSTIATQLAGRLNLPNVLQTDMVYEL LRTSTDAPLTSVPVWARDFDSPEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEG IHLDPSIYLMDEEKRDDNSKMEKKVAESENSPATVKSKTEKQQENELHEKRMDDSQEC MSEEGRISEGLSCAKSHVISSSDPACSKEKNPRAEGEGHKDLDLQKNNATKKDKPAAK PIIVPIVLRMSDFDHKALLEEWIATRASRDNCLPQDHRKLINNLKLIQDYLCSFESQG LTVVDISANSFPQTLDWLHSYLLQCIERGLLAACSESPKQGGS</aaseq>

Gene Sequence

<dnaseqindica>4768..4827#4403..4477#4069..4134#3684..3740#2940..3055#2374..2656#2009..2064#1795..1892#1664..1701#1453..1567#1186..1244#1008..1041#659..732#400..585#139..303#ctcctcttcttcttctttcctctcctgtgattctgtgaaggaatggtggtggtggaatcaatcaatcaatcgatcgatcaatcaatcgtgcaagggaagaagggaatcaaaatcgttttctttttgtttgttttttgaagggaggggaggggggcgatcgaccagaccaccatggtgcgagcagcgtcaggggcagatccaccaccattcctccaaacacgcatggtggacatgccctcctcctcctcctcctcctcctcttccctctctcaatctcaatctcaatctcactcccactctcaggttcttcttcttcttaattccatctactgtttatttgctaataataagtagtaattcattcctcactctctcaatccgattcgcattcgcatgcagactcacaaggagaaggagaaggagaaggagaaggaggaggagcaggaggaggagaagccctccccctcccgtaacgcctcctccaagtacgacttcgtcaaggtcaaggtgtggcttggcgagaatgccgatcactactacgtcctctccaggttcctcctctgcaggatgctcaccgtcaccaaggtcacatccccccctcccctcttcatggctgctgggatctcatcatcccatgacggattcctcttcttttcagattcctaatcatgttgccattaagattgcccttgaactcaagaaattgcttgtcgacaacagcctccttgatgtgtatcttcatcttccccttctcactatcttttctttttcttattataccaacaatacattgcactcactgcttactacctttcaagttttagttttccttttatctatctactccgtatcattttgacgcaccattgttgctgttattgttttgggacactccactcatcctccttgccatctgtataatatacaatgctgctcctcctgttttttacaattatgtgtgtggattgcctcttgggtttacactaatatagcttggaatcttgcagttctcagagtgacttagaggctaacctatttaaggtgatttcttttttactttcttgttattatctcttcctgttctgtgcatgtctttttcttttcctgtggcctcgagtgcgcgtctgtgttttgggtgttaaagatgctcgtcaatttctaactcaaaaggcactacttttgcagctcatggagaagcggggatacggcgaggattatattaatcggtataaaatgatgaccaggtatttgcaacgtgatgtttgtaacatcactacgataatcctgaactaataaaaaatatgcacataatttggtttgtccgtgattcatactcttatctgcgtaaccgctccattttgcaccattatgacattcatgttatgtttaccctcgcaaacttctacttcagttgcatttggacagtatgtttatgctctatttgtcttgcagattccatcatcaaagagtaccactagtagttttagtgtgtggaactgcttgtacgggaaaatcaacaattgctacgcaactagctggaaggctgaatttaccaaatgttttgcaggtttattttccttttctgttgcatttatcatgttttatgttccaatattgttatagtttctaccttaccaacgcatttcctgattgtaacatatagacagacatggtgtatgagttgctacggacatcaacagagtaagttgtttcatttctttcgtctccattatccgttgctatataatctctttgtttcactcttggcccccaccccctcttctctctttgcagtgcccctcttacttcggtgcccgtgtgggctcgggattttgattctcctgaagagcttatcacagagttctgcagagaatgcagagttgttcgcaaaggtatgtgatatcttgtggggattttttttgttcacaataaattgttctctgcatcggatatgattggatactggttattcactgggttgttttctggttgtctaaatattgattaggtttggctggtgatttgaagaaggccatgaaagatgggaagccaattatcatcgaggtatgatgtcttgcctcttgatcactcggtcaaccatggtccacgcgtcatatatgcatgactgacaaatcccccaacaaccccatcagaccacactacctcctgtacatgtcattgtgtgacatggctatgaaggtcaggaggggtgttggtgctgcatagatccaccggtagtacttatctgcattttgttagtgctgcctcacaagtaagcacagaacatgtaaccatcaatttcttttaacagcatgaccctgtgcatatttctatatagattatatctaatattaacaaatattttcattgcagggaattcatttggatccaagtatttatttgatggacgaggaaaagagagatgataattccaaaatggagaagaaggtagctgaatctgaaaattcaccagcaactgtaaagagcaagacagaaaagcaacaagaaaacgaactacatgagaagagaatggatgacagtcaggagtgcatgtctgaggagggtagaataagtgaagggctatcttgtgctaaaagccacgtaattagctcttctgatcctgcatgttctaaagagaaaaatcccagagctgaaggtaagccaaatggaagtaaattttaaatcccagaggggaaaggtcagtaaaaacaccacaaggttcatgcagactaaagcaagtttaatttgtattactatgtagtatgcactagttggacaatataatctaggtgcaagtagggagaatgcccaatataagaaaacaagtgtgcaaaagacccaatcatacactattccagtattccaaatacctgactaaccaggccggtttgttagttccgatcgcactgctgaggggagatcacgctgctgttttgtaggtgaaggacataaggatttggacctacagaaaaacaacgccaccaagaaggacaaacctgctgctaaaccaataatagtcccaattgtgttgaggatgtctgattttgatcacaaggtctgttttctctgtgtcacaaatttagatacttgtctgctcttttttttattaaattaaacctagttccatattgggaaagaggagttcgcataagatgcgataatgataggctcaaggcaagtgattgccctgcttactgtggttgggttcatccccagccagccagccaactgtggcaggaggctccgatcccccaaactttggatttaatttggtctttgatgatcaaccaagagacatatgccagccttgatagtttatctgccaactaacaaaccaactaactggagaatcatattcctaaccaagcaataacctagtagaaacttgactaacaactaaatcattccttggcatcaatgatgctggatgctgtctgttctggtttgtcctctcactccaatgaattcgtccacaactgttgagttttaaacctatctatttttatttcacatcagtgccacctctgaaaactattgagtagaataagggaatggatgcaggctcccagtaatcaatacccgatgtcatggatgcttgttttttatatattccgcacttgtcatttgtttcatttgtttatattcactattcacattcagattggctttgttgttttgttcaggcattgttagaggaatggatagccaccagggcttccagggataattgtcttcctcaggtactcatataagttagtgcacaatggtttcttgtttcacgccaggaaaaatgccatttaatccggatgcttgtaatctgcacctgtcattgaatgattataacatcttgctctatgttagacaacttataaaaaataggacctaacagtgaaatgccacatgtgctgcacattgtgacttttagtagtattgctgacagtaagaattgattcatcattatacaatggtaaggactaatatgtgtacttctcttagtaatgtactcagctttgttagctcatttgagtaagatctgactttgtgttatgtgaacttcccattgttcaggatcatcgaaagcttataaacaaccttaagcttattcaggactatctttgttcttttgaatcacaggtgatttttcctttattactgaaaatcatgaattcttttcaaaaaaaaaaaatctacctactactgcatgcagttgccaaccatgtactcgtgcaatcattttaatggagtaaatatgttctagttcaaaaaatggtttgatgtatatttttttcatgtacccttcatgtgctgttgttttctcccagtaagatgctgcattcatttatctcgcattggattaccatttgggttcagtattttcttaccttttgttaaatgtattcagggattgaccgttgttgacatttcagcgaactcattccctcagacactagattggcttcacagctatcttcttcaggtacctgagaaaagggcatatcctaacgtgctttccaacataacttttttttcttttacgaattagtcaattgacatgcacaacaatataacaaaacattgaccaaatgataagttctaaaccattatttatctataacaggtcttttatcaagctgtcatatataatttacttaatgaagcttcatgtttttttcaaaaaaaaaacttataagcttgatttgacaatatatttattatttagtagtgaattggtcattgatttcggtgttattatttattacttgacagtgcatcgaacgtggccttttggctgcatgttcagaaagtcccaagcaaggtgggagctaacggatacggacgaagcccgcattagtgttgcttaagatatattggttggtaatcaggaacgttggcagtggtagagaactccatagttggataaaagctttttagaggtggatcggtaaaatgaaaagaaactcaaggccggtgaaataatgcgatcactcacatagacataagttttgtttttccccgagctcccagagataatagatactagtactgtagtacatctcgcagaattgagacgagtatgctcaattaattgagcgaaaagacgagtataaagaggtcaatctcgggtcatccaacatatcaacaaactcgatcagcaccttgtcaatctgtggtccacagcgtataaaaggtcggctccacagcttgtaacgtggattctgaaacatcattttatcatcatcatcatcatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0102400, RefSeq:Os03g0102400