Difference between revisions of "Os03g0108600"

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(Created page with "{{JaponicaGene| GeneName = Os03g0108600| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001055237.1 GI:115450202 GeneID:4331339| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0108600|
 
GeneName = Os03g0108600|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0108600

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001055237.1 GI:115450202 GeneID:4331339

Length

3081 bp

Definition

Oryza sativa Japonica Group Os03g0108600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:484269..487349

Sequence Coding Region

484271..484619,484921..485408,485610..485804,485907..486094,486187..486400
,486497..486628,486723..486895,486984..487206

Expression

GEO Profiles:Os03g0108600

Genome Context

<gbrowseImage1> name=NC_008396:484269..487349 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:484269..487349 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cggataggaaggaaggagacggcggcgctgcgagagatggaggtggcgggtgctcaggccggcatcctccccctcctcctccgtcaccccgcgtccctccggggctccctctccctctcctgcggcggcgcccgccggagctgggcggcggcggcggccacggcggaaggaggaggaggagaggagggtcgcggctacgagagggtgcccatggacacccccggcgcctaccgcctcgtcgaccgggccaccggccgcagcgtcatcgtgtggggcggcaccgacgacgtcagcatgccctcccccgcggtgctctccacgaccacgcgcgtccccgaccgcccaaaagaaaatgggagaagtacaagtattggaaattttggcagactcaaggcacagaaagttaaagttttagcaaggagatcagctcaccttaagagagaggattctggtcgcataagcaccagccggttcagtgaatctccttctgatgagtctgacgaagatggcacttattttgaaagagatagggcaagaaacacaaggcaaaacagtagatctagagacgacaaaacccgtggtgcgcattctctgaattctgtcttgaggcagtatagaggtgctgatgacttggattttccaggatcagaggctacttctggctccaaaagatggggtaacatttctgatgttacatttggacgacagaatcaaaggcaaaagggccctttagatagtgggtttttcagtcgaagatcttttaaggaaattggctgtagtgatgaaattctaggtgcactgagaagttttggcttccctcgtccatcgcatattcaggcgatggcatatcgacctgtcttggaggggaaaagctgcattattggtgatcaaagtggatctggcaagacattggcatatctttgcccagtagtacaaaacctgaggaaggaagaagttgaggggctccataggtcttctcctaggaacccacgagtggtagtactgacgcctacagctgagcttgcttctcaggtccttaacaactgccggtcaatatcgaaatcgggggtaccttttaggtctatggttgcaactggtggatttcgacagaagacacagttagaaagtcttgatcaagagcttgatgtacttattgcaacacctggtcgtttcttgtatctgcttcaagaaggctttgtgcaattaaataacctcagatgtgttgtgctggatgaagtggatattttatatggtgaagaaagttttgaacaagtgcttcatcaattgattactgttgcaccactgaccacgcaatatctctttgtcactgccactcttcctctcgacatctacaacaaggttgttgaaacatttccggactgtgaactaatcatgggaccaggcgtccaccgaacaagctctcgtcttgaagagattctcgtggactgcagtggagatgacaatgaggaaaagaatccggagacggcgttctcaaacaagaaatcagcacttgtaaagataatcgaggaatctcctgtccgtaaaacaattattttctgcaacaagattgagacatgcagaaaggttgagaatgcgctgaggcgggtggacaggaaggcttcgcagatcaaagtgctccccttccatgctgcattggatcaacaacagagaatcgccaacatcaaagagttcctgaacaagcagacggctgactcgatgttcctggtgtgcacagatagggcgtcgcgaggcatcgactttgcgaacgtgaaccacgtggtgctgttcgactacccgcgcgacccgagtgagtacgtgcggcgcgtcggcaggacggcccgcggcgcgtcgggcaacggcaaggcgttcgtgttcgcggtggggaagcaggtgtccctcgccaggagggtgatggagaggaacatcaagggccacccgctgcacgatgtgccatgcgtctag</cdnaseq>

Protein Sequence

<aaseq>RIGRKETAALREMEVAGAQAGILPLLLRHPASLRGSLSLSCGGA RRSWAAAAATAEGGGGEEGRGYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSP AVLSTTTRVPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGRISTSRFSE SPSDESDEDGTYFERDRARNTRQNSRSRDDKTRGAHSLNSVLRQYRGADDLDFPGSEA TSGSKRWGNISDVTFGRQNQRQKGPLDSGFFSRRSFKEIGCSDEILGALRSFGFPRPS HIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVV LTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFL YLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDI YNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKII EESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLN KQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFV FAVGKQVSLARRVMERNIKGHPLHDVPCV</aaseq>

Gene Sequence

<dnaseqindica>3..351#653..1140#1342..1536#1639..1826#1919..2132#2229..2360#2455..2627#2716..2938#atcggataggaaggaaggagacggcggcgctgcgagagatggaggtggcgggtgctcaggccggcatcctccccctcctcctccgtcaccccgcgtccctccggggctccctctccctctcctgcggcggcgcccgccggagctgggcggcggcggcggccacggcggaaggaggaggaggagaggagggtcgcggctacgagagggtgcccatggacacccccggcgcctaccgcctcgtcgaccgggccaccggccgcagcgtcatcgtgtggggcggcaccgacgacgtcagcatgccctcccccgcggtgctctccacgaccacgcgcgtccccgaccgcccaaaaggttccattattcaataccacttactatacagttgtgcaatgacaatgatttttcatcttcaaagtaaatatgttcccggtgcattatgccaacatttggccgtaacaggttgggtatgagattaattttaacgccttttagcaacggaacacgcattccttcatgccaatatgccatgtcatcagacatgaaattcactagattttcctgtattgtgtgatggatgtgttatctctctcagtttgcttagtaagaactgcttcactttcccaaaaatgaggccattttttttacaccacagaaaatgggagaagtacaagtattggaaattttggcagactcaaggcacagaaagttaaagttttagcaaggagatcagctcaccttaagagagaggattctggtcgcataagcaccagccggttcagtgaatctccttctgatgagtctgacgaagatggcacttattttgaaagagatagggcaagaaacacaaggcaaaacagtagatctagagacgacaaaacccgtggtgcgcattctctgaattctgtcttgaggcagtatagaggtgctgatgacttggattttccaggatcagaggctacttctggctccaaaagatggggtaacatttctgatgttacatttggacgacagaatcaaaggcaaaagggccctttagatagtgggtttttcagtcgaagatcttttaaggaaattggctgtagtgatgaaattctaggtgcactgagaagttttggcttccctcgtccatcgcatattcaggtaaataacttttcaaaacaaaattctctacttggggcagacatctcaagcttttactctcttttgttgtgaagaagaacatcttgaattgttgtcataagtgactgtgtatgtctgcacttaatccttgcactataacaatgagctttccttactatgcctaaaaatcttttccttaactagcctgttgcattatttcaggcgatggcatatcgacctgtcttggaggggaaaagctgcattattggtgatcaaagtggatctggcaagacattggcatatctttgcccagtagtacaaaacctgaggaaggaagaagttgaggggctccataggtcttctcctaggaacccacgagtggtagtactgacgcctacagctgagcttgcttctcaggtattttacaccttgaatgtgatcctgccaatgttcagtgattgtttttatgccaaattaggaaaagctggagtgctcattggaacatttttaatctctcaggtccttaacaactgccggtcaatatcgaaatcgggggtaccttttaggtctatggttgcaactggtggatttcgacagaagacacagttagaaagtcttgatcaagagcttgatgtacttattgcaacacctggtcgtttcttgtatctgcttcaagaaggctttgtgcaattaaataacctcagatggtatgccattgttgttcattttctctcattttgcagcttgaacttccatctgagaacacatcaaactaatgagtgaacatacttatgaacagtgttgtgctggatgaagtggatattttatatggtgaagaaagttttgaacaagtgcttcatcaattgattactgttgcaccactgaccacgcaatatctctttgtcactgccactcttcctctcgacatctacaacaaggttgttgaaacatttccggactgtgaactaatcatgggaccaggcgtccaccgaacaagctctcgtcttgaagaggttggccatttcttgctttcttcatttttgagaaaaatgttcccaggagataccttttggagggtacatatttacatttgagaggttgaactgcagattctcgtggactgcagtggagatgacaatgaggaaaagaatccggagacggcgttctcaaacaagaaatcagcacttgtaaagataatcgaggaatctcctgtccgtaaaacaattattttctgcaacaaggtagttcctctccagtattccagcatacgatctgcaaccaaaaagagtttgcagtgtatctgacagatggattttttttttgtggtggtgttagattgagacatgcagaaaggttgagaatgcgctgaggcgggtggacaggaaggcttcgcagatcaaagtgctccccttccatgctgcattggatcaacaacagagaatcgccaacatcaaagagttcctgaacaagcagacggctgactcgatgttcctggtgtgcacagataggtaaggcatcgatcacctgaagtgaagcgcatgaaatcgattctgttttcaagcgatgatctgattggatttggtgggtggcatgcagggcgtcgcgaggcatcgactttgcgaacgtgaaccacgtggtgctgttcgactacccgcgcgacccgagtgagtacgtgcggcgcgtcggcaggacggcccgcggcgcgtcgggcaacggcaaggcgttcgtgttcgcggtggggaagcaggtgtccctcgccaggagggtgatggagaggaacatcaagggccacccgctgcacgatgtgccatgcgtctagtcctagaaagagctctacagagcagagacagtttcaggtcaaatttgtgctagcatacatagcaccatctaatattgatgtagatagggtttgtgaaaccggttttgatgcatacacatatgctgatcgagtgaattagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0108600, RefSeq:Os03g0108600