Difference between revisions of "Os03g0119100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0119100| Description = Similar to Phospholipase D beta 2| Version = NM_001055312.1 GI:115450352 GeneID:4331421| Length = 3851 bp| Definiti...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0119100|
 
GeneName = Os03g0119100|

Revision as of 19:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0119100

Description

Similar to Phospholipase D beta 2

Version

NM_001055312.1 GI:115450352 GeneID:4331421

Length

3851 bp

Definition

Oryza sativa Japonica Group Os03g0119100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1005937..1009787

Sequence Coding Region

1006097..1006390,1006468..1006665,1006767..1006937,1007069..1007217,1007444..1007591
,1007679..1007747,1007832..1008080,1008180..1008374,1008533..1008649
,1008869..1009786

Expression

GEO Profiles:Os03g0119100

Genome Context

<gbrowseImage1> name=NC_008396:1005937..1009787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1005937..1009787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgaattggagcgggatggatgtggtgtggccgcacgggcacggcgtctggggctcgtcgtcggcgtcgcggcggtcggcgatgctccacggcagccttgacatatggatccacgaggcgcggaacctcccaaacatggacatcgtctccaagaccgtcgtcgacatcctcgggacgaagaagaagaagaaggcggccaacggcgccatgaccagcgacccctacgtcactgtgcagctcgcgtccgccaccgtcgcgcgcacctacgtcgtcaacgacgacgagaaccccgtgtgggcgcagcacttcctcatccccgtcgcgcacgaggcgcccgccgtccacttcctcgtcaaggacagcgacgtcttcggcgccgagctcatcggcgaggtcgtcgtccccgccgagcagctcgaggccggggagcacgtcgagggcgtctacccggtcctcgatcccgccgccggcaagccgtgcgcccccggcgccgtgctgcggctgtcggtgcagtacatccccgtggcgaggctaaccatgtaccaccacggcgtcaccccgggcccggacttcgccggcgtccccaacacctacttcccgctgcgccgcggcggccgggtgacgctgtaccaggacgcgcatgtgccggagggctcgctgccggagatcaggctgggcaatggcgcgctctaccggcaaggccaatgctggcacgatgtctacgacgcgatatcgcaggcgaggaggctcatctatatcaccgggtggtcggtgttccacaccattcagcttgtgcgggacggcggcgccggcgtctcgctgggcgatctgctgaagaggaagtcgcaggagggggtgagggtgctgctcctcgtctgggacgatccaacgtcaaggaacgtccttggtatccagatggaaggttacatgggcacacgggatgaggagacccgtagatttttcaagcattcttcagttcagatactgctctgcccgcgttctgctgggaaaaggcacagctgggttaagcagcaggagaccggaaccatttttacacatcatcagaaaacagtgattctggatgctgatgccggcaaccataaaaggaaaatagttgcttttgttggaggccttgatttatgcggtggacgatatgatacacctactcatcctctttttcggtctctccagacattgcacaaggacgactattataacccaaactttgcggtacttgatgcccaagggccaagagaaccatggcatgatttgcattctaagattgatggcccagcggcatatgatgtcttgacaaactttgaggagcgctggttaaaggcatccaagcgcagcggggttaaaaaattgtcaaaggcaaataatgacacattgctatggattggaaggatacctgatattgcaagcattgacgatgaagtgtattcaagtgacaatgatccagagcgatgggatgttcagatattccggtcaattgattcaaattctgtcaagggttttcccaaaaatccaagagaagcaaccagtaagaatctcgtttgtgggaaaaacgtactaattgatatgagcgtacaaaccgcttatgtgaatgcaatccgaggagctcaacacttcatctatattgaaaatcagtatttccttggttcttcatttaattgggattcacataaagatgtaggtgctaataacttaataccgattgaaatagctctcaaaattgccaacaagatttatgccaatgagaggttttcagcgtacatagtaattccaatgtggcctgaaggtaatcctactggtgctcctacacagagaatactttactggcagaaaaaaacaatgcaaatgatgtatgaggtaattcacaaggcattgaaagaagtagggctggataacacatatgagccacaggattacctgaacttcttctgtcttggcaatcgtgaagcaggcggcagtcctagcacttgcagaggatcaagttcagccaacaatccccaggatcaagctaagaagaaccggaggttcatggtgtatgtgcactcgaaagggatgatcgtggatgatgaatacgtgataattggatcggctaacattaaccagagatccatggaaggaaccagagacaccgagatcgccatgggagcgtaccagccccagtacacatgggcaaacatgctttctgctcctcgtggacagatctacgggtacaggatgtcactgtgggcagagcacattggagcggtggaggaaagcttcagttgcccagagagcctggagtgcacgaggcaggttcggcacatcggggagcagaactggaggcagttcgcctccagcgaggtgagcgagatgagagggcacctcgtcaagtaccccgtcagcgtcgcccgcgacggcaaggtgaagcccctgccgggatgcgccgcgttcccggacctcggcggcaacatctgcggcacgttcctgcccatccaagaaaacctcaccatatga</cdnaseq>

Protein Sequence

<aaseq>SNWSGMDVVWPHGHGVWGSSSASRRSAMLHGSLDIWIHEARNLP NMDIVSKTVVDILGTKKKKKAANGAMTSDPYVTVQLASATVARTYVVNDDENPVWAQH FLIPVAHEAPAVHFLVKDSDVFGAELIGEVVVPAEQLEAGEHVEGVYPVLDPAAGKPC APGAVLRLSVQYIPVARLTMYHHGVTPGPDFAGVPNTYFPLRRGGRVTLYQDAHVPEG SLPEIRLGNGALYRQGQCWHDVYDAISQARRLIYITGWSVFHTIQLVRDGGAGVSLGD LLKRKSQEGVRVLLLVWDDPTSRNVLGIQMEGYMGTRDEETRRFFKHSSVQILLCPRS AGKRHSWVKQQETGTIFTHHQKTVILDADAGNHKRKIVAFVGGLDLCGGRYDTPTHPL FRSLQTLHKDDYYNPNFAVLDAQGPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKR SGVKKLSKANNDTLLWIGRIPDIASIDDEVYSSDNDPERWDVQIFRSIDSNSVKGFPK NPREATSKNLVCGKNVLIDMSVQTAYVNAIRGAQHFIYIENQYFLGSSFNWDSHKDVG ANNLIPIEIALKIANKIYANERFSAYIVIPMWPEGNPTGAPTQRILYWQKKTMQMMYE VIHKALKEVGLDNTYEPQDYLNFFCLGNREAGGSPSTCRGSSSANNPQDQAKKNRRFM VYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPQYTWANMLSAPRGQIY GYRMSLWAEHIGAVEESFSCPESLECTRQVRHIGEQNWRQFASSEVSEMRGHLVKYPV SVARDGKVKPLPGCAAFPDLGGNICGTFLPIQENLTI</aaseq>

Gene Sequence

<dnaseqindica>3398..3691#3123..3320#2851..3021#2571..2719#2197..2344#2041..2109#1708..1956#1414..1608#1139..1255#2..919#gtcgaattggagcgggatggatgtggtgtggccgcacgggcacggcgtctggggctcgtcgtcggcgtcgcggcggtcggcgatgctccacggcagccttgacatatggatccacgaggcgcggaacctcccaaacatggacatcgtctccaagaccgtcgtcgacatcctcgggacgaagaagaagaagaaggcggccaacggcgccatgaccagcgacccctacgtcactgtgcagctcgcgtccgccaccgtcgcgcgcacctacgtcgtcaacgacgacgagaaccccgtgtgggcgcagcacttcctcatccccgtcgcgcacgaggcgcccgccgtccacttcctcgtcaaggacagcgacgtcttcggcgccgagctcatcggcgaggtcgtcgtccccgccgagcagctcgaggccggggagcacgtcgagggcgtctacccggtcctcgatcccgccgccggcaagccgtgcgcccccggcgccgtgctgcggctgtcggtgcagtacatccccgtggcgaggctaaccatgtaccaccacggcgtcaccccgggcccggacttcgccggcgtccccaacacctacttcccgctgcgccgcggcggccgggtgacgctgtaccaggacgcgcatgtgccggagggctcgctgccggagatcaggctgggcaatggcgcgctctaccggcaaggccaatgctggcacgatgtctacgacgcgatatcgcaggcgaggaggctcatctatatcaccgggtggtcggtgttccacaccattcagcttgtgcgggacggcggcgccggcgtctcgctgggcgatctgctgaagaggaagtcgcaggagggggtgagggtgctgctcctcgtctgggacgatccaacgtcaaggaacgtccttggtatccagatggtatgcacaatgcaacatgcaatcacaaaattaattttcggctatttgtttcttgtatcaaactgatggtcacaccacttatttggcttctggtccaaatttcattgctttgtctaatggtagttggggttgatggagtgacacattgatctctgaaaacctgtgaataatatattcatgcaaatacagcttgacttgttgtcagagttttctctataggaaggttacatgggcacacgggatgaggagacccgtagatttttcaagcattcttcagttcagatactgctctgcccgcgttctgctgggaaaaggcacagctgggttaagcagcaggttgtttatttacaatttgttttcttcagtaagctttgtctcctctgaatgccataatttgcttcatatagacacatgtcaccagctaacatctttttagtcaaaatagctgttcttgtggaccatgtaatgatgttaacagttgaaaattgaaccaggagaccggaaccatttttacacatcatcagaaaacagtgattctggatgctgatgccggcaaccataaaaggaaaatagttgcttttgttggaggccttgatttatgcggtggacgatatgatacacctactcatcctctttttcggtctctccagacattgcacaaggacgactattataacccaaactttgcggtgagattactttgtcctattgttcatgtgcctgtatcactgtatgtggtttatacacatgaaaatagttcctgtaattgacgcatcttgtatttgcaggtacttgatgcccaagggccaagagaaccatggcatgatttgcattctaagattgatggcccagcggcatatgatgtcttgacaaactttgaggagcgctggttaaaggcatccaagcgcagcggggttaaaaaattgtcaaaggcaaataatgacacattgctatggattggaaggatacctgatattgcaagcattgacgatgaagtgtattcaagtgacaatgatccagagcgatgggatgttcaggtaagatccttcaaaggttttcacagctacagataaacaaagtatgtgaccaaacagcactgaacagtattaacttggaagcagatattccggtcaattgattcaaattctgtcaagggttttcccaaaaatccaagagaagcaaccagtaaggtaactaagatataaatttcacccaattatgctatgtttggttattctttgtatttacctgacacagacttttcctttggttgacagaatctcgtttgtgggaaaaacgtactaattgatatgagcgtacaaaccgcttatgtgaatgcaatccgaggagctcaacacttcatctatattgaaaatcagtatttccttggttcttcatttaattgggattcacataaagatgtaggtaagcatgagctttgtttgcttcaaatcttgttgttcaactcaatgtattctggccttttatggcacgttccaattgcgttctctaatagtaacttcatttaaaatttgctgctttatgttggagaataattcaaaatttcttgacccttatcatgacgtaaataaatacgacaagtacttatggttgcccctaatttcaggacttaaaatttgttctgctgcaggtgctaataacttaataccgattgaaatagctctcaaaattgccaacaagatttatgccaatgagaggttttcagcgtacatagtaattccaatgtggcctgaaggtaatcctactggtgctcctacacagagaatactttactggcaggttagagcgtctctctagcattgtcttctagtctgctcaactgtgtactatctgctactacattctacagagctaacttctctcagtatagcaatgtaacttatttgttgtcattgttgttgtcattgtagaaaaaaacaatgcaaatgatgtatgaggtaattcacaaggcattgaaagaagtagggctggataacacatatgagccacaggattacctgaacttcttctgtcttggcaatcgtgaagcaggcggcagtcctagcacttgcagaggatcaagttcagccaacaatccccaggtgagactgcagtacttctgcttctctcgcagcatactcaaattgtatgccatccgtacattcagagttcagatttgtcttgctgcgacctgtacattcaggatcaagctaagaagaaccggaggttcatggtgtatgtgcactcgaaagggatgatcgtggatgatgaatacgtgataattggatcggctaacattaaccagagatccatggaaggaaccagagacaccgagatcgccatgggagcgtaccagccccagtacacatgggcaaacatgctttctgctcctcgtggacaggtaaatgatcccttgatcacccaaaattccacagatttcacagttgcgctgatggattggttttggtgagctcgaagatctacgggtacaggatgtcactgtgggcagagcacattggagcggtggaggaaagcttcagttgcccagagagcctggagtgcacgaggcaggttcggcacatcggggagcagaactggaggcagttcgcctccagcgaggtgagcgagatgagagggcacctcgtcaagtaccccgtcagcgtcgcccgcgacggcaaggtgaagcccctgccgggatgcgccgcgttcccggacctcggcggcaacatctgcggcacgttcctgcccatccaagaaaacctcaccatatgaaacaggataaagatgttttcgtttgcgattcttgagaagggattcttgtgaaagcagccctggacgcgttgcattcgttgtagatgtgcagatttttctcttttcttcgttacgatttggaggatgtgaaattttgggttgggatcaacacagatttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0119100, RefSeq:Os03g0119100