Difference between revisions of "Os03g0145900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0145900| Description = The start codon is not identified.| Version = NM_001055488.1 GI:115450704 GeneID:4331606| Length = 3876 bp| Definit...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0145900|
 
GeneName = Os03g0145900|

Revision as of 19:28, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0145900

Description

The start codon is not identified.

Version

NM_001055488.1 GI:115450704 GeneID:4331606

Length

3876 bp

Definition

Oryza sativa Japonica Group Os03g0145900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2527035..2530910

Sequence Coding Region

2529144..2529233,2529362..2529439,2529564..2529604,2529689..2529732,2529816..2529898
,2529985..2530076,2530160..2530229,2530337..2530378,2530468..2530605

Expression

GEO Profiles:Os03g0145900

Genome Context

<gbrowseImage1> name=NC_008396:2527035..2530910 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2527035..2530910 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gataccaccaaaccatatagtgatcttattgagactgttctaccttcctcatcacaggttatctgctctctctgcaacaaagaacaggatgtacaacaggattgctccaattgtggggcatgcttgggtaaatatttctgcgcaaaatgcaacttttatgatgacgatgtatcaaagaaccaatttcactgcgatggatgtggcatatgcagaactggtggtgcagagaacttctttcactgtgacaaatgcggatgctgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataactgccctgtatgcttcgagtatctatttgactcaacaaaagacatcagtgcactgcactgcggacacacgatccatctggaatgcctatacgagatgagatcccatcaacaattctcttgcccggtctgcctgaggtctgcttgtgacatgtcccatgcatggcaaaagcttgatcaagaggttgcagcatcgccgatgccagtgatctatcagaagaaaatgatatggatcctatgcaacgactgtgggacgacatcgaacgtgcaattccacatattgggacacaagtgccccggatgcagctcttacaacacccggcagacaagagccgcccctgctgccgcgtgctccagagtctga</cdnaseq>

Protein Sequence

<aaseq>DTTKPYSDLIETVLPSSSQVICSLCNKEQDVQQDCSNCGACLGK YFCAKCNFYDDDVSKNQFHCDGCGICRTGGAENFFHCDKCGCCYSYVLKDSHHCVERA MHHNCPVCFEYLFDSTKDISALHCGHTIHLECLYEMRSHQQFSCPVCLRSACDMSHAW QKLDQEVAASPMPVIYQKKMIWILCNDCGTTSNVQFHILGHKCPGCSSYNTRQTRAAP AAACSRV</aaseq>

Gene Sequence

<dnaseqindica>2110..2199#2328..2405#2530..2570#2655..2698#2782..2864#2951..3042#3126..3195#3303..3344#3434..3571#gtgcgtgcagcaggcgcaggccgtgctcgtgctcgctcgctcgggcagtcggtctccctccgcgaggagagaggagacccttggcaagcgtggaggacgactcggtgccggccgagtgcggctgctgctgctgcggctgtctcctgccgtggccgcgaaatcatcgggttggccggtggtcggcgcacgcaggtactacgtgggacggtgccgtgtggctcgtccgtgcggctctgtttttttttctctctctcgggtttggcgttaagtacggtgagaggcagctgcttcgcgtcttggtttcttgttctaccttgcgttttgtttggtgtctcgtcgtcggtctggtctgtggtggccggcggcgagatggccgagctgattcagaggaggtgaaaaacctgagaagagatgcagagcagagcaagaagttttgagttgatttgcttcttcatttttggtctctcttcaggtgctaagagctacaatacctgagaattcagttagtggatcatcagttcgaggaaagctgcgagaaatggagatggacttggcagtcgagcagtacgggtaagcaccattcatcatgtctccgttcctgtggatgcagtggatcttttttactagcaagtcgttactgatcactcgtttgtttctcctcctttttttcctcttccatatgcaagatgcgtgcattacaggaggaaatgcaagataagggcgccctgctgcggcgagatcttcgattgcaggcactgccacaacgaagcgaaggtatcaccgttttttccttgtctcagtattacatgctttgaattgtctctggctaggagaaaaaaaccttattgttctgcttactttgttacaggactcgttggaggtcagcatcagcgaccggcacgagatccctcgccatgaaatcaagctggtcggtgtccctgtccagttattttggctgccctttccagcgtatcactatcgctgttactttatcggatattttgctgcatttgatgctaactgtcgtgtcggacatgatattagtaatttgcgctgcccaatattcttggaaatgattgattactgctgcttcagttccatcctgaatttcttttccttttctactgtacgcttatccactactactgtatactccctccgtctcaaaatataagcatttttttagatttcgacacatttttcgagatattattatgatcaacaatatgtataaagataaaatattttaaataaaaatagttgtatattatgatagtttgattaatgataaactattagcatcaattttacatgattgattttttttgtcattaatagtcaaaattagaaatgtttgactttgcaattttctaaaattgtttatattttaggacaaggagagagtagatacttagccagattctgttgatttttttggctacttaatgtgtccgtgcagcagtataggtgcgtcctccatattaagtactctctccgtcccagaatatagcaacctagcatgggatgagacctatcctaagaccatgtaagagaatagtcaagtgggagaaactattgtaggcatggttcaccgttagtcaagaactcaggatgatttgaagcacagcatagttgcaaaagaatagattgtaccatcaactacacactcctattattgatggctgactataactggtgtttcagaagttactcaaagactgaatgaactataactaacagtgcaagttcatatcctaaagattgaattggttgcatgtccgatctagatcattatctgaaaatgttcatactagatcattatctaaaaaaaaaaaatatttcactacgtgcccatagaatctagttttaaactcagcgtaaaaaaagtcaccaggtcacaaataactgcacagattaagtagagaagacagctggagtaaaaccaatagccgttatcaaatttcagaatctgcgactgcttgtatggttgaaacgggcaaagtctgttcttttgtggatatggatacaagtcactatctcccctttcgccacttttggttgtttaatcataatgagcctcctccaccaatataatgaccttttttttgagataccaccaaaccatatagtgatcttattgagactgttctaccttcctcatcacaggttatctgctctctctgcaacaaagaacaggatgtaagttgccaataactagtaagaatagtcattatctaaaaaaaaaactagtaagaatagtgtttatcaggtgtcatcagatttggctgttcccatcacataaaattcgtccgccttttgatttgtaggtacaacaggattgctccaattgtggggcatgcttgggtaaatatttctgcgcaaaatgcaacttttatgatgacgatgtaagcacataaagaacatttgaaccttgtgctgttaatgaaactaaatagcattttgattatattttttgggtggtatttctgttcttttctctgacttgcgtggctctcgctcttgttccaggtatcaaagaaccaatttcactgcgatggatgtggcatatgcaggcaagttgtgctaaatatgcattcctgtgacggagtaatgaaatatgagccctttttgataaatctcaccatcacattttacagaactggtggtgcagagaacttctttcactgtgacaaatgcggtatgtttagggtcgagtgatttcatcaatttcagattttggtattagtaaatatttgcattgacaaatattgtggttatcaggatgctgctacagctatgtgctgaaggattcccatcattgtgtggaaagagcaatgcaccataactgccctgtatgcttcgaggtaaatatttgttgtcagagaaaccatggactctgaaattttctgtattctactaaaataaattcccttatttgtttctgtgctagtatctatttgactcaacaaaagacatcagtgcactgcactgcggacacacgatccatctggaatgcctatacgagatgagatcccatcaacagtaagtaatcacagataagacttacaccatggcctctcccaactgattgctgactatggtgtcaatctgtgacatttcgccagattctcttgcccggtctgcctgaggtctgcttgtgacatgtcccatgcatggcaaaagcttgatcaagaggtgcattttccttctcccattgcacagcttatccattgacactgaccatgtacatatacatacatacatacatgcatagaacaccatccaaataactcttcactcaggttgcagcatcgccgatgccagtgatctatcagaagaaaatggtatgtaaattcagttacttgtgttcttcagtccaaccaggtaactatacgctgaacaaaagtttttgtggtttttttggctctgtcagatatggatcctatgcaacgactgtgggacgacatcgaacgtgcaattccacatattgggacacaagtgccccggatgcagctcttacaacacccggcagacaagagccgcccctgctgccgcgtgctccagagtctgaattctgaagaacagtgagatgagagctagtctgaactccgaagaacagcgagagatttgcactgctctctgcagtctgaaatgcccaataaaaagatttgcagcctgtgattagtctcaaagcccatcaaaacgcaaacaaccgtttgttctgaaatttgggctcgtccatggtttgttccccctagtaggccggtctggtgctaatctggcccagcgttgtgctttaggcggatttcgactttgcttgcctgctgggccttggccgcaagcgccagtcaggactctgcatcgagatgattttta</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0145900, RefSeq:Os03g0145900