Difference between revisions of "Os03g0160100"
(Created page with "{{JaponicaGene|
GeneName = Os03g0160100|
Description = Similar to EDR1 (Fragment)|
Version = NM_001055570.1 GI:115450868 GeneID:4331696|
Length = 6932 bp|
Definition = Or...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0160100| | GeneName = Os03g0160100| | ||
Revision as of 19:28, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0160100 |
|---|---|
| Description |
Similar to EDR1 (Fragment) |
| Version |
NM_001055570.1 GI:115450868 GeneID:4331696 |
| Length |
6932 bp |
| Definition |
Oryza sativa Japonica Group Os03g0160100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:3179681..3186612 |
| Sequence Coding Region |
3179841..3180284,3181096..3181518,3181984..3182084,3182727..3183988,3184174..3184214 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:3179681..3186612 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:3179681..3186612 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagaatctgttcaagagtaagatcaagtggcagcaccggtcgaacgaccccgcgtcgtcgcaggggcaggggcaggggctgccgcagcagacgccgccgtcgccatcgccggcgagctccccgtcgggggggccgcctgcgctatccgtgtcgacggtatcgtcgtcgtccccttccgccgccgcgacgccgacgggggctgctgcggcgggggcgggaggtgggggtgggggaacgggtggggaggattacatgttgtcggaggaggagttccagatgcagctggcgatggcgctgtcggcgtccaacagcgagtgcgtgggcgacctggacggggagcagatcaggaaggccaagctgataagcctcggcaggggcgaccgcttcgccgccgtccgggacgacgagcaaaccgcggatgcgctctcccgccgctaccgggactacaactttcttgattaccatgagaaagttattgatggcttctatgacatttttggcccctctatggaatcatcaaagcaagggaagatgccatcactagcagatcttcaaacgggcataggcgacctgggttttgaagtcatcgtaatcaatcgtgccattgataccaccttacaggagatggaacaagttgcacaatgtatcctgcttgactttcctgttgcaaatattgcagccttagttcaaagaatagccgagcttgttacagatcacatgggtggacctgtgaaagatgcaaatgacatgctcactagatggctagagaaaagcactgagctaagaacctcactacacacaagtttgttgcctattggctgcatcaagataggtctgtctcgtcaccgtgccctacttttcaagattctcgctgatagtgttggcattccttgcaagcttgtcaaagggagtaattatactggtgatgatgatgatgctatcaacataataaagatgaatgaaagggagtttttggttgatctcatggctgctcccggtactcttattccatcagatgtcttaagttggaagggcaactcattaaattctaatgcaagactcacccagaatccattggctgggtcatcaagtacaactgattctaatctcagtgccaatgcattaccacccggacataaaggtggccaactgcctttatttagcagtggcgattggatatcggccagtcaatctggatatgaaaaagatggagccaccacatcttcacaggcctcttcaagtggcacaacatctgttgctgctggaagcgcttttgatagttcttggacattagtttctcatggacaatcagatgatccatcaacctctgctggtatgtcagcacagcagaaagttatacttccaggtggagaacatccatggaatgagaatataaatgcgcgaaatgagaatataaaacttgtttcagatttacaagggaattcagagtccatcaacttatttgccgaccttaatccttttgggggtagggagcccaaaaggacttcagtgccattaaatgggccagataatagaaataatgagttgcaaagacgcagagagaatgtagtccctagcacacgaagaccccagcagcgattagttatgaaaaactggtctccttacaatgatgtttccaacaacaagcagtacaattatgttgaggattcatttgcacgtagaaatattggtgataatgctgcatcatcatctcaggtgccacggccatctgcaaaaaatactaatcttaatgttgtagtgcgcactgatacaccatacatggcagctcataattatgataatagtatggctggttcctctgcaatgaagatgacttctacagctgggattgggaaggttcctgataaggttctgtacggtgatttggacaagggccttactaattctagactgggggatcaaccaccgatagaaagacataaatggggcaattctgtagaaggaaggattccaacaggcacagttcacaatcaagcaaaagaacacaaggagaacttcgatggaaagcaagacaataagaagttacatcctgatccaaagaaatccccacttgacagattcatggacacatcaatgccatcaaggaaccctgaatccgtttcaccatcctttgctaggtcacacaagctagacaccatgttcgacgatgtgtctgaatgtgaaattcattgggaagatcttgtgattggtgaaaggattggcttaggttcatatggagaggtgtaccgtgctgattggaatggaacagaagtagctgtcaagaaattcttggatcaagatttctatggtgatgctttggatgaattccggagtgaagtgcggattatgcgtcgactgcgtcatccaaatattgttctcttcatgggtgctgttactcgtcctccaaacttatctattgtatctgagtatcttccaaggggaagcttatataagatccttcaccgtcctaattgccaaattgacgagaagcgtagaattaaaatggcccttgatgtggccaaaggaatgaattgcctccatattagtgtaccaacaattgttcatcgggatcttaaatcaccaaacttgctggttgacaacaactggaatgtgaaggtttgtgattttggactttcacgcttgaagcacagtacattcttatcatccaaatccactgctggaactccggagtggatggcacctgaggtcttgcggaatgaacaatcaaatgaaaagtgtgatgtttacagctttggtgtcatcttgtgggaattagcaacacttaggatgccatggagtggaatgaatccaatgcaagttgttggggcagtcggcttccaggacaagcggctcgatattcccaaggaaattgatcctctagttgcaaggatcatatgggaatgctggcagaaggatccaaatttgcggccctcgtttgcacagttaaccagtgctttgaagactgtccaaaggctagtaaccccttctcaccaggagtcccagagccctcctgtgcctcaagaaatatgggtgaattcttccaccccttga</cdnaseq> |
| Protein Sequence |
<aaseq>MKNLFKSKIKWQHRSNDPASSQGQGQGLPQQTPPSPSPASSPSG GPPALSVSTVSSSSPSAAATPTGAAAAGAGGGGGGTGGEDYMLSEEEFQMQLAMALSA SNSECVGDLDGEQIRKAKLISLGRGDRFAAVRDDEQTADALSRRYRDYNFLDYHEKVI DGFYDIFGPSMESSKQGKMPSLADLQTGIGDLGFEVIVINRAIDTTLQEMEQVAQCIL LDFPVANIAALVQRIAELVTDHMGGPVKDANDMLTRWLEKSTELRTSLHTSLLPIGCI KIGLSRHRALLFKILADSVGIPCKLVKGSNYTGDDDDAINIIKMNEREFLVDLMAAPG TLIPSDVLSWKGNSLNSNARLTQNPLAGSSSTTDSNLSANALPPGHKGGQLPLFSSGD WISASQSGYEKDGATTSSQASSSGTTSVAAGSAFDSSWTLVSHGQSDDPSTSAGMSAQ QKVILPGGEHPWNENINARNENIKLVSDLQGNSESINLFADLNPFGGREPKRTSVPLN GPDNRNNELQRRRENVVPSTRRPQQRLVMKNWSPYNDVSNNKQYNYVEDSFARRNIGD NAASSSQVPRPSAKNTNLNVVVRTDTPYMAAHNYDNSMAGSSAMKMTSTAGIGKVPDK VLYGDLDKGLTNSRLGDQPPIERHKWGNSVEGRIPTGTVHNQAKEHKENFDGKQDNKK LHPDPKKSPLDRFMDTSMPSRNPESVSPSFARSHKLDTMFDDVSECEIHWEDLVIGER IGLGSYGEVYRADWNGTEVAVKKFLDQDFYGDALDEFRSEVRIMRRLRHPNIVLFMGA VTRPPNLSIVSEYLPRGSLYKILHRPNCQIDEKRRIKMALDVAKGMNCLHISVPTIVH RDLKSPNLLVDNNWNVKVCDFGLSRLKHSTFLSSKSTAGTPEWMAPEVLRNEQSNEKC DVYSFGVILWELATLRMPWSGMNPMQVVGAVGFQDKRLDIPKEIDPLVARIIWECWQK DPNLRPSFAQLTSALKTVQRLVTPSHQESQSPPVPQEIWVNSSTP</aaseq> |
| Gene Sequence |
<dnaseqindica>161..604#1416..1838#2304..2404#3047..4308#4494..4534#4646..4714#4844..4944#5282..5360#5439..5537#5626..5694#5787..5836#6080..6256#6365..6503#ccttcctcccacgcttcttcttcttcttcttcttccctttccccaacctcgccgtccttcgcttgctcacgcggccttctccgatcgcggcggcggcggcggaggaggaggagtacggggaggggcgtagcgaggatcgagcggagacgtggttgacgagatgaagaatctgttcaagagtaagatcaagtggcagcaccggtcgaacgaccccgcgtcgtcgcaggggcaggggcaggggctgccgcagcagacgccgccgtcgccatcgccggcgagctccccgtcgggggggccgcctgcgctatccgtgtcgacggtatcgtcgtcgtccccttccgccgccgcgacgccgacgggggctgctgcggcgggggcgggaggtgggggtgggggaacgggtggggaggattacatgttgtcggaggaggagttccagatgcagctggcgatggcgctgtcggcgtccaacagcgagtgcgtgggcgacctggacggggagcagatcaggaaggccaagctgataagcctcggcaggggcgaccgcttcgccgccgtccgggacgacgagcaaaccgcggatgcgctctcccgccgctaccgggtgagtcgccatgaccaaggattcgattcgagatggattatatatgctaaactatgcaaccgtgtgactagtgagattttagtttgcattgccatacaacagtagacttattgcgggggaaggattgttttacatgttatgattaccagttactactataatccatgctaccattgttctcgtcgaattcaaattcaaccaatggattggatagtagcttccgtggctatgtctagaccatgtaaatgtgaatcttcaccttggaatggaaaatcacacatagaatagggaagggctcctatctagcatctacatgtattcattcctgtggactggaattacctcctttggtctcttccaggttcccggtgatcaacccattaaaacaattgtattaataaaatacttctacaatatacgttgccatgtttttgctggtgcattgcgatagaatcctacagatcagagtcttgcattggatattgcccaggaataaaggactattgtttctgtggacggcggggaagtagatgatattacaaggcagcgagattttctagactggaggttcttttgcgggcaattgtagctttgtagcttgttggttacatcaatctatgtcttttacatgttgggttgattccattctgttacttagtgagtgatatttcatatttgtagatattttgcttggtagatcacttttttccttccatgatgtgtcaattaagctcaaacatggggatgataagtatatttgcttgctggattgtctgacattctatcactgtgcttctattctgactttcaggactacaactttcttgattaccatgagaaagttattgatggcttctatgacatttttggcccctctatggaatcatcaaagcaagggaagatgccatcactagcagatcttcaaacgggcataggcgacctgggttttgaagtcatcgtaatcaatcgtgccattgataccaccttacaggagatggaacaagttgcacaatgtatcctgcttgactttcctgttgcaaatattgcagccttagttcaaagaatagccgagcttgttacagatcacatgggtggacctgtgaaagatgcaaatgacatgctcactagatggctagagaaaagcactgagctaagaacctcactacacacaagtttgttgcctattggctgcatcaagataggtctgtctcgtcaccgtgccctacttttcaaggtcagttctctctcagaaaatcctcaatatattgaatgttatgaattgtctagggtaagggttcaaagactaggggatatggcactcgccttctaataacggtggcagggcttctccctgctgagctaaaagaggatttgaggcttagggctaactttagagattcattgattgattgataatagagtacgtgggggtccctttatagggaggacatactagacacataaggaactaaatctctagtattatataaaccaatccaatctctatctctaactttctaataaacttcatctctttcctaactagataatctcctatatttatatgatttattcctaatttatcatgcccaaactgctgcatgggcctatgctcatacattgaatgtaagcactagatttcttcatttgtccaacatatatagatgtccgcttatggctactgtatatcttcgtgcagattctcgctgatagtgttggcattccttgcaagcttgtcaaagggagtaattatactggtgatgatgatgatgctatcaacataataaagatgaatgaaaggtattgatgtatttgatcattgctgtttctctgggggaaaactatagtaaaaaaacccggaccggtgggtgacctggccgaccttctggttcaccggtctgaccggtggctcggatggttgaaccacggttcacatgtgtacatgtatattgttattccctcctactcacatatggtgcaatagcataagggttaggccatccttccgtgagcacactgcccagggttcgattcccaccaaatgcgccactccttgccaattttgcggaaaaaaaggggacagccacagcaagcattgatgaaatgggcctcaggcagcccatttatggcccatttgcaggttgacctgtccaaccagtatcggtttaatgtccggttcgcctaagaaccggccggttcagccggttcaaagcggtttgaatgcatgtccggtctttgaagcaaaccgaaccgtgctaaggtctggttcccatttttttccggtcgaaccgccggtccggtctggttttttctactatggggaaaacaatccaaatacattatttatttattcgtctgctacctttgtttcaaatatatttttaaataatttggtattgctgccttacattttctaagtgggtttatgtgctgtttttgcagggagtttttggttgatctcatggctgctcccggtactcttattccatcagatgtcttaagttggaagggcaactcattaaattctaatgcaagactcacccagaatccattggctgggtcatcaagtacaactgattctaatctcagtgccaatgcattaccacccggacataaaggtggccaactgcctttatttagcagtggcgattggatatcggccagtcaatctggatatgaaaaagatggagccaccacatcttcacaggcctcttcaagtggcacaacatctgttgctgctggaagcgcttttgatagttcttggacattagtttctcatggacaatcagatgatccatcaacctctgctggtatgtcagcacagcagaaagttatacttccaggtggagaacatccatggaatgagaatataaatgcgcgaaatgagaatataaaacttgtttcagatttacaagggaattcagagtccatcaacttatttgccgaccttaatccttttgggggtagggagcccaaaaggacttcagtgccattaaatgggccagataatagaaataatgagttgcaaagacgcagagagaatgtagtccctagcacacgaagaccccagcagcgattagttatgaaaaactggtctccttacaatgatgtttccaacaacaagcagtacaattatgttgaggattcatttgcacgtagaaatattggtgataatgctgcatcatcatctcaggtgccacggccatctgcaaaaaatactaatcttaatgttgtagtgcgcactgatacaccatacatggcagctcataattatgataatagtatggctggttcctctgcaatgaagatgacttctacagctgggattgggaaggttcctgataaggttctgtacggtgatttggacaagggccttactaattctagactgggggatcaaccaccgatagaaagacataaatggggcaattctgtagaaggaaggattccaacaggcacagttcacaatcaagcaaaagaacacaaggagaacttcgatggaaagcaagacaataagaagttacatcctgatccaaagaaatccccacttgacagattcatggacacatcaatgccatcaaggaaccctgaatccgtttcaccatcctttgctaggtcacacaagctagacaccatgttcgacgatgtgtctgaatgtgaaattcattgggaagatcttgtgattggtgaaaggattggcttaggtatttttcctcaactaagattttgacatgatccttgcttctctatacattaacaagttgaaccgacaaatctttaacaatttgtcaaactatattattatagctcagccatgtgtaaactcattgcactatctgatgccaatttgttgcacaaacttgaaccaacttcttcctcctcccaacaggttcatatggagaggtgtaccgtgctgattggaatggaacagtaagaaactgtttgcttttatttccatattgtgccatagaaacattcttcccagaggttaaattctttattgttttgcttctgtcaaaaaacatttttgtttatttgcaggaagtagctgtcaagaaattcttggatcaagatttctatggtgatgctttggatgaattccggagtgaagtaggtgaaactatatatattttatatatcttagagctttactggctatagcgtggattcatttatttgtcatttttaattgatttttgctgcaatgttttgatttgccatatactttctttttacaaggtgcggattatgcgtcgactgcgtcatccaaatattgttctcttcatgggtgctgttactcgtcctccaaacttatctattgtatctgagtatcttccaaggtataacaattttctactgttgtttgcttgtgaagatcttttggtgtttatgataaagtatcatggtgtagataaacatagaaaacattctatctggaaggaccacaaagaaaagctctctcaacaacttagctttagaatggaacataacactggaggttcaacatgctgtagttgaaatacctgtctttaatgatttacttgtgcatgggaggtggcatactggcatctatctatagtagttatattatagtgcaactcatgctctatagttattgtactggtcatgttcgacgaattgatggctcacccttgactactctcctgtccttggcaggggaagcttatataagatccttcaccgtcctaattgccaaattgacgagaagcgtagaattaaaatggcccttgatgtggtaagtattttctatattttcttggcatgtttgtttatttttgtatctgcttgagaaaatggttgctttctcttaaaggccaaaggaatgaattgcctccatattagtgtaccaacaattgttcatcgggatcttaaatcaccaaacttgctggttgacaacaactggaatgtgaaggtactgtgctctttttacctttacattcattcagtcataagtatttatgagcgtgctgatcgattggctcaccaatgatgtgaaataggtttgtgattttggactttcacgcttgaagcacagtacattcttatcatccaaatccactgctggaactgtaagtactaaaccggaccatagtaggatgagttctctccttctttgatcatcactaaacatttactatttctgttttcgatatctcaccagccggagtggatggcacctgaggtcttgcggaatgaacaatcaaatgaaaagtaagttattcctcgatggcttttgtttcaataactattagcttttgccctagcttgttcaatttattttttcattctgggcataccattcaaagttgttcagcattacagaagaaattatgtttatcttccagtctctactcgtagaaatggaacacccatctccctcacaaacctttcagctttccttgtttgattggtgtggcagtaatctcactcagacatcacctgaaatttctgcaggtgtgatgtttacagctttggtgtcatcttgtgggaattagcaacacttaggatgccatggagtggaatgaatccaatgcaagttgttggggcagtcggcttccaggacaagcggctcgatattcccaaggaaattgatcctctagttgcaaggatcatatgggaatgctggcagaagtgagtgtttagaaacaaacctattttatgttgcatcaataaagtactctcttccaactatcaattgtgttgctagatccgagctaatatttggtttttaaacctcagggatccaaatttgcggccctcgtttgcacagttaaccagtgctttgaagactgtccaaaggctagtaaccccttctcaccaggagtcccagagccctcctgtgcctcaagaaatatgggtgaattcttccaccccttgatgttgaggggcattccactctcaaaattgtgagtaattattgatgattgttgctgttaagtttgttcaagtctgcaaatgtgggcgcactgtagattctagcggccctaatggtagacatccctgctgccgcgacaaaagaacccagcagtagagtatgtatagagactatagtcatcgaccaaaacgatgacccgaagaagaaatccagtctgtggcatctcatttttcatgttcccagtttgcctttgtaaaaccttttggattcgagccctctggaaagcagtgagagctcgtggcgttggattaagaaggatctgtgtctgactgtgtttacaagtggattggataattgttgctgcagaacatgacatcttggaagttaaaaatgttgtaatatgcaatttttttaaacttgcaattcgaatgc</dnaseqindica> |
| External Link(s) |
