Difference between revisions of "Os03g0169000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0169000| Description = Protein of unknown function DUF246, plant family protein| Version = NM_001055632.1 GI:115450992 GeneID:4331760| Leng...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0169000|
 
GeneName = Os03g0169000|

Revision as of 19:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0169000

Description

Protein of unknown function DUF246, plant family protein

Version

NM_001055632.1 GI:115450992 GeneID:4331760

Length

3722 bp

Definition

Oryza sativa Japonica Group Os03g0169000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3695720..3699441

Sequence Coding Region

3696030..3696294,3696438..3696595,3696814..3697018,3697834..3698123,3698197..3698359
,3698446..3698534,3698635..3698702,3699109..3699283

Expression

GEO Profiles:Os03g0169000

Genome Context

<gbrowseImage1> name=NC_008396:3695720..3699441 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3695720..3699441 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtgggggagcgatggcgaggtcgaggcctagggtttggctcctggcggggtgcagcgccgtgctgctgtgggccttcgtcgggcagctcgtggccgtcggacgcctcctcgccttgttcggcctcgccggcgacgcggagccctcgcctccgcccaccgcgcttccgcctcgaagagtctataagagtaatggttatctgaaggtatcttgcaatgggggtttgaatcagatgcgttcagagatatgtgacatggtggcggttgctcgcttgctaaaccttacaatggttgtcccagaactagacaagaggtcattctgggctgatcaaagcaattttgaagatatatttgatgttaaacatttcattgacacattaagagatgaagtgcacattgttaaacagcttccgaagaggtttggtccagaggattcaaacaatatacttaatatgccacctgtgagctggtctgatgaaaaatattacttgcatcagatcttaccattattcagcaaatatagcgtcatccattttaacaagacggatgctcggttagcaaacaatggtatcagtacacagcttcaactacttaggtgccgtgttaattttcatgcactgaagttcacccctcaaattgaggccttggggaataaactggtgcagaaacttcaggccaagggatcatttgcagccttgcatttacgctatgagatggacatgctggccttttctggttgcaatcatggtctttctcaagaagaagctgaagagctcaaaagaatgagatatgcttatccatggtggagagaaaaggaaattgattcacaagctaagagattgcaagggctatgcccacttacacctgaggagacatcttttattctgaaagctctgggatttcagaaggacactctcatatacattgctgccggtgaaatttatgggggagaaaaaagattagaaccattacaagctgcatttccaaaacttgtaagaaaggagacgctgctagacttggaagctctacgacaattccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtgatattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggttcctgggtttcaggagaagtgtgctactagaccgacagaaattggttggatttatagatctgtacaacaataagacaatctcttggaacaattttgcatcttctgtccaggaaactcatagaaatcgtgtagttcaaccgtcctgtcggcagaaacttgaaaataagccaaaagaagaggattacttttatgctaacccacacgaatgcctggccaattcaagattttgcagccgaaccaaggatgcaatcagtgtaaggtga</cdnaseq>

Protein Sequence

<aaseq>GGGAMARSRPRVWLLAGCSAVLLWAFVGQLVAVGRLLALFGLAG DAEPSPPPTALPPRRVYKSNGYLKVSCNGGLNQMRSEICDMVAVARLLNLTMVVPELD KRSFWADQSNFEDIFDVKHFIDTLRDEVHIVKQLPKRFGPEDSNNILNMPPVSWSDEK YYLHQILPLFSKYSVIHFNKTDARLANNGISTQLQLLRCRVNFHALKFTPQIEALGNK LVQKLQAKGSFAALHLRYEMDMLAFSGCNHGLSQEEAEELKRMRYAYPWWREKEIDSQ AKRLQGLCPLTPEETSFILKALGFQKDTLIYIAAGEIYGGEKRLEPLQAAFPKLVRKE TLLDLEALRQFQNHSSQMAALDFIVSTASDIFIPTYDGNMAKLVEGHRRFLGFRRSVL LDRQKLVGFIDLYNNKTISWNNFASSVQETHRNRVVQPSCRQKLENKPKEEDYFYANP HECLANSRFCSRTKDAISVR</aaseq>

Gene Sequence

<dnaseqindica>3148..3412#2847..3004#2424..2628#1319..1608#1083..1245#908..996#740..807#159..333#aaacggaaaaagaaaaaaaaaatcgcagctaggcctctcccgaatcttctggaaccttctcgaaccaggaggcggaggaggagctgctgctgccgcggctgccaatgccggtggcggggatcaggaggaggaggaggaggagggggcggtggatgtagggtgggggagcgatggcgaggtcgaggcctagggtttggctcctggcggggtgcagcgccgtgctgctgtgggccttcgtcgggcagctcgtggccgtcggacgcctcctcgccttgttcggcctcgccggcgacgcggagccctcgcctccgcccaccgcgcttccgcctcgaagtgcgtgatctcctccgtgtcttatttatttgtttatttgtttagttatttcttcgcggagtttgatttaagttttgttcagttttgaattttgatgtgtatggatttggtggcattctgtagggatgagtagaattgtacaaatgaaagtgtattggattcaaatgtggatgaacttgttattgccctttcccaaatcgatagtaagttagtgaagttgtagaagcggctgcttcaagtacagttgcgattgatgagaaaaatggttttcactctagaagtcacggcagaacataaatggatgcactagctgattgacatcctcatttttttgaatgtttacttaagaagcagcattaatcatcacttgggcatatcagttttaacttgatttttttgtttttaggagtctataagagtaatggttatctgaaggtatcttgcaatgggggtttgaatcagatgcgttcagaggtcagttgtttttttttttacttgagttagttttgctgctcagtattatattgtctctcacttttttatacttctgttattttgaaaccatatattccagatatgtgacatggtggcggttgctcgcttgctaaaccttacaatggttgtcccagaactagacaagaggtcattctgggctgatcaaaggtatttttcattttgtaggataggttatgtaccggacctaccatgttaatatctgaaatgtgcgatatttttgcaatactttgcagcaattttgaagatatatttgatgttaaacatttcattgacacattaagagatgaagtgcacattgttaaacagcttccgaagaggtttggtccagaggattcaaacaatatacttaatatgccacctgtgagctggtctgatgaaaaatattacttgcatcaggtttgtacatatatcttgcttgacacatgcttactatatattatatactcttcatggtatcttatctatgcagatcttaccattattcagcaaatatagcgtcatccattttaacaagacggatgctcggttagcaaacaatggtatcagtacacagcttcaactacttaggtgccgtgttaattttcatgcactgaagttcacccctcaaattgaggccttggggaataaactggtgcagaaacttcaggccaagggatcatttgcagccttgcatttacgctatgagatggacatgctggccttttctggttgcaatcatggtctttctcaagaagaagctgaagagctcaaaagaatgaggtcaaaagccatcttgtgctcttatatatatattaataaataccaaaatgtagcctttcagatattgacccaagtagttccttgcatataagaggaaataccacactccattgctccctccgttttttcttatgtcgtttgttgtagtaggaggcaaacaccatccccctattcaaccaaaacacacactctctcactctccatggttttgtattttttcttatgtcgtttataggacatttgcatggttcgaatatgcacctttgaccattactttttctagtcatatattcactaaaaatattagagctatgacgatttggaccttttttccttcgcctatgtacctactaatgtcattgactacacacaattcaaaacaacatctatttaaaatgaaaggggtaatagtttaatgatgttatctatacccccttaactcgtctagaaatgattgttcatgtcatagatactatgtgtaacagtcttctacaattctatgtaacattctcgtattacctttttggtgattatttgagtttataaaacatcactctgagtctattaaatcgtcattttcatacctagtttttctctcctttttatggtggattcatttcaatgaaatgaaaaaggaaaaatactcatttattcttaatattgtcaaattagtcaattgctatcttattcttgagtgctgagtatggacacacaattgcacgtctatgtctctaagataagtgtctcaatgttttctgtgtaagaaaagtacaacaagccacaagcaactgaggccaactttttctctcaaacagatatgcttatccatggtggagagaaaaggaaattgattcacaagctaagagattgcaagggctatgcccacttacacctgaggagacatcttttattctgaaagctctgggatttcagaaggacactctcatatacattgctgccggtgaaatttatgggggagaaaaaagattagaaccattacaagctgcatttccaaaacttgtaagtgcaatattgtagtcaaaatgctgccaattttttttgccttttccatgtgttatggtaactggtaataattgtagtacagttttcataaatttcaatgcatgtgtttttttccctatctgtctgccaacactgtttcacatgttttgggataccacttcattgcctaaatgttcactcacttcgctatataaacagtgttgaatatctttcaggtaagaaaggagacgctgctagacttggaagctctacgacaattccagaaccattcttctcagatggctgcacttgacttcattgtatccacagccagtgatattttcattcctacttatgatggtaacatggcaaaacttgttgaaggtcaccggaggtatggacacagccagatttcctctttatgaaaatcaagcttcttgttcagttcagtatgatttgatcatgtagccaaaagttggcgtgcaatcagatatatgttgtggtcattagttttttattggcatttcaatatttcaggttcctgggtttcaggagaagtgtgctactagaccgacagaaattggttggatttatagatctgtacaacaataagacaatctcttggaacaattttgcatcttctgtccaggaaactcatagaaatcgtgtagttcaaccgtcctgtcggcagaaacttgaaaataagccaaaagaagaggattacttttatgctaacccacacgaatgcctggccaattcaagattttgcagccgaaccaaggatgcaatcagtgtaaggtgagcgtcaagtcaagttgtaacctcaccgagccaagttattatggcgacgtgcagtggactgaagccagcagcacagcaggcagagtccatcttgatcgtttaaccggttttcctgatctcctgttgtataggtcagccttttcgctttgcgattgattgattcatttttcacttgccgaatgcagaatatgaatgcccttctaaagcatgtaaattgggctggttgtttactgttcgtgttcatgacaatcaattaattcatgatgatagccaaagcaaaatacatgcttttctatgaaaaaaaaattcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0169000, RefSeq:Os03g0169000