Difference between revisions of "Os03g0185400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0185400| Description = Protein of unknown function DUF1677, Oryza sativa family protein| Version = NM_001186362.1 GI:297721854 GeneID:927105...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0185400|
 
GeneName = Os03g0185400|

Revision as of 19:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0185400

Description

Protein of unknown function DUF1677, Oryza sativa family protein

Version

NM_001186362.1 GI:297721854 GeneID:9271051

Length

1572 bp

Definition

Oryza sativa Japonica Group Os03g0185400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:4458012..4459583

Sequence Coding Region

4458195..4459226,4459299..4459547

Expression

GEO Profiles:Os03g0185400

Genome Context

<gbrowseImage1> name=NC_008396:4458012..4459583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:4458012..4459583 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctctccccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgccctcaagctgggggtcctccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcttgggccgtcaccaagattagatccgggggatcggatctctcggcggcggtggcggcggcggcggcgagaatgaacagcccccggcgatttgtgaatctggtgctcgacggcatcgcccggcggcagccgtcctacggcctgcaccgcgtcgacgtctcgacgctgttccgtccgctcgccgccgatgaggatgaagaagggcggcgcggcggcgctatggaagtcgaggacgctcagctgcctcgcgccgccatgatcttccacccttgcccatcatacgggcttccgagttggccctcctccgtggatttcatgcctctcggcagcggcagcggcagcggcagaggcggcgaaaagaacgacgtggtcgccgtcgactacagcggcagcggggtgctgtacggcgccgcctcgcgcgccgtcaccatccttcccccgatgaacacacccaaggccttcccggtgtcgctcaccatcggaggcaacatctacgtcatggaaaggtacccggcctcctcccaatccccctcctcttgcttcgaggttctcgtccacgatcgccacccaaaccaccccttcgccacgccgcactggcactggcgcctcctcccttcgccgcccttcgccttcaccgccgatgatgcccttgatagcatccgcaactttttccaagatgatgatgacttcctcaccgcctacacggccgtcggcggctcatgcatctggatgacagtgcagagcaccgtcgccgccgccgcggggacttactcctttgacacgtccaccgccacatggaccaagctcggcgactggttgcttccgttcagaggccgcgccgagtatgcgcccgagcacaagctctggttcgcgctctcctccgacggcaacgagctgtgcgcgtccgacctcgccgccgcggcgcaatgtgtggaaggtgagccccgtgtcgcccagcggctcaccggtgacgccgcacctcgtccctctcggcgccggcaggttctgcattgtcagattcatgtacaaagggtggaggtccaactttga</cdnaseq>

Protein Sequence

<aaseq>MFGRARCSTSAPAAGERRALPVDPLSLPRLLVSAATTPGAAAPA VSTLHAAALKLGVLPPRSRPPTPSSPPTPSPASSWAVTKIRSGGSDLSAAVAAAAARM NSPRRFVNLVLDGIARRQPSYGLHRVDVSTLFRPLAADEDEEGRRGGAMEVEDAQLPR AAMIFHPCPSYGLPSWPSSVDFMPLGSGSGSGRGGEKNDVVAVDYSGSGVLYGAASRA VTILPPMNTPKAFPVSLTIGGNIYVMERYPASSQSPSSCFEVLVHDRHPNHPFATPHW HWRLLPSPPFAFTADDALDSIRNFFQDDDDFLTAYTAVGGSCIWMTVQSTVAAAAGTY SFDTSTATWTKLGDWLLPFRGRAEYAPEHKLWFALSSDGNELCASDLAAAAQCVEGEP RVAQRLTGDAAPRPSRRRQVLHCQIHVQRVEVQL</aaseq>

Gene Sequence

<dnaseqindica>358..1389#37..285#atggaatggtaatctacgggatttacagagcgcgcaatgttcggacgcgccaggtgctcgacctcggcccccgccgccggcgagcggcgcgctctccccgtcgaccctctctccctccctcgcctactcgtctccgccgccaccacccccggcgccgccgccccggccgtctccaccctacacgccgccgccctcaagctgggggtcctccctcctcgctcccggcctccaacgccctcgtctccgcctactccctctccggcctcctcttgggccgtcaccaaggcaaggggagtagtactactttcccttcgtccttttacgatttcatccaggctctttctcgtcccgttttagattagatccgggggatcggatctctcggcggcggtggcggcggcggcggcgagaatgaacagcccccggcgatttgtgaatctggtgctcgacggcatcgcccggcggcagccgtcctacggcctgcaccgcgtcgacgtctcgacgctgttccgtccgctcgccgccgatgaggatgaagaagggcggcgcggcggcgctatggaagtcgaggacgctcagctgcctcgcgccgccatgatcttccacccttgcccatcatacgggcttccgagttggccctcctccgtggatttcatgcctctcggcagcggcagcggcagcggcagaggcggcgaaaagaacgacgtggtcgccgtcgactacagcggcagcggggtgctgtacggcgccgcctcgcgcgccgtcaccatccttcccccgatgaacacacccaaggccttcccggtgtcgctcaccatcggaggcaacatctacgtcatggaaaggtacccggcctcctcccaatccccctcctcttgcttcgaggttctcgtccacgatcgccacccaaaccaccccttcgccacgccgcactggcactggcgcctcctcccttcgccgcccttcgccttcaccgccgatgatgcccttgatagcatccgcaactttttccaagatgatgatgacttcctcaccgcctacacggccgtcggcggctcatgcatctggatgacagtgcagagcaccgtcgccgccgccgcggggacttactcctttgacacgtccaccgccacatggaccaagctcggcgactggttgcttccgttcagaggccgcgccgagtatgcgcccgagcacaagctctggttcgcgctctcctccgacggcaacgagctgtgcgcgtccgacctcgccgccgcggcgcaatgtgtggaaggtgagccccgtgtcgcccagcggctcaccggtgacgccgcacctcgtccctctcggcgccggcaggttctgcattgtcagattcatgtacaaagggtggaggtccaactttgatttcgacgagaaattcgcggtgttcaccggcgtcgaggttcggcgtggttgtaataagaacagcagcacaacgctccagatggttaatcataggtccagacggtacagccttctcgatagggtatgtgactctcgtgtgttttaaatagaaatttatgaataaaaacacttctcattttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0185400, RefSeq:Os03g0185400