Difference between revisions of "Os03g0213400"
(Created page with "{{JaponicaGene|
GeneName = Os03g0213400|
Description = Similar to RNA helicase|
Version = NM_001055897.1 GI:115451522 GeneID:4332045|
Length = 11234 bp|
Definition = Oryz...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0213400| | GeneName = Os03g0213400| | ||
Revision as of 19:30, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0213400 |
|---|---|
| Description |
Similar to RNA helicase |
| Version |
NM_001055897.1 GI:115451522 GeneID:4332045 |
| Length |
11234 bp |
| Definition |
Oryza sativa Japonica Group Os03g0213400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:5947476..5958709 |
| Sequence Coding Region |
5947847..5947930,5948660..5948791,5949327..5949476,5950382..5950552,5950682..5950849 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:5947476..5958709 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:5947476..5958709 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ttttaccttcagtactccagtgttgaggcttacaatgagatgcttcggcgtcacatgaatgagagtgaggtgattaatatggtggcccattcctctgagtttgagaatattgtagtaagagaagaagaacaggatgaattagaatccctttttaagaatgcatgcccacatgatattaagggggggccaactgacaaacatgggaaaatttcaattctcatacaggtttacatatcgcgtgctccaattgatagctcctctttgcactctgatgctcaatacattagtcaaagcttggctcgcattatgagggcattatttgagatttgtctgcgccgagggtggtctcagatgacatccttattattagagttctgcaagggtgttgaccgcaaaatatggcccgaacaacatccacttaggcagtttgacagagacctttctcatgagatatgtaaaagacttgaggaaaaacatgttgatctggatcgtctttatgagatggaagaaaatgatatcggagctcttattcggttttctcatctaggaaaggtggttaaacaatatgttggatactttccatatgtcaacttatctgctactgtgagcccaatcaccaggactgttcttaaagtggaccttcttataactcctgaatttttgtggagagatcgtcatcatggcatgtcgctacgatggtggattattgttgaggattctgaaaatgatactatttatcattcagagttgttcacactaatgaagaaggcaagaggagcacctacaaagatttcttttaatgtaccgatctttgaacctcatccaccacagtactacatacgggccatatcagattcctggttaggagcagagtcactgtttactgtttcttttcataaccttaccttgccacagacacaaataacacacactgaacttttggacctgaagcctcttccattgagtgctcttggcaacaagacgtatcaagatctatacagattttcccatttcaacccgatacaaacacaggcttttcacgtcctctatcacagcgacaataacgtactcttgggagctccaactgggagtggcaagacgatttctgcagaactagcaatgcttcatcttttcaacacacaaccagacatgaaggtagtttacattgctccattaaaggctatagtacgggaaagaatgaatgattggagacaacgtcttgttactcagcttgggaagaagatggttgagatgactggcgacttcactccagatatgatggccctattatcagcggacatcataatttctacccctgaaaagtgggatgggattagtcgtagttggcatagtagaagttatgttatgaaggttgggctcatgatattagatgagatacaccttcttggagctgaccgtggccctattctcgaggtcattgtatcaagaatgcgatacatatcatcacaaacagaacgttcaattcggtttgttggtttatcaacagcattagccaatgctcgtgatttagctgattggttgggcgtgagagatgatggtctattcaatttcaagcccagcgtgaggcctgtacctcttgaagtgcatatccagggatatcctgggaagttctactgtccaagaatgaatagcatgaataaaccagcatatgcagcaatatgtactcattcaccagacaaaccagttctgatttttgtatcatctcgtcggcagactagacttactgctcttgatctcatccagcttgctgcatcagatgaaaaaccaaggcagttcctaagcatggcagataactctctcgacatgattctttcacaagtctctgacaccaatttgagacatactctgcaatttggaataggtctgcatcatgcaggtctaaatgatagagatagatccttggtcgaggaactcttttcaaacaacaagattcaggtactggtatgtactagcacactggcttggggtgttaatcttccagctcacctggtcataattaagggaaccgaatactacgatggcaaaacaaaaagatacatcgattatgatatcacggatattctgcaaatgatgggtcgggcaggtcgaccacaatatgaccaacatggcaaagctgttattcttgttcatgaaccaaaaaaaagcttttataagaagttcctgtatgaaccattccctgttgaaagtaatctaagggagcacttgcatgatcacataaatgcggagattgtttccggcactatcagtaataaagaggaggcgatcatttatcttacttggacatacctgtaccgaagactggttgttaacccagcttactatggattggaagatactgaaacgtacaccttgaattgctacctctcaaggctagtggaaacaacatttgaagatcttgaggacagtggatgcataaaagtggatgatcactctgtaaagtacttgattttgggaaagatagcgtcacagtattaccttagttaccttacagtctcaatgttcgggacaaatataggccccaacacatcattagaggcatttgtgcacatactgtcagcttctgcagaatttgatgagcttcctgtacgccacaatgaggataacttgaaccgaaccctgtgtggaaaagtcccgtactcagttgatcagcaacaccttgatgacccacatgttaaagcaaacttactctttcaggcacacttttccagagcagaattaccaattagtgactatgtcactgatttgaaatcggttcttgatcagagcatacgtattatacaggctatgattgacatatgtgccaatagtggatggctttcaagcgcattgacttgtatgcatcttctacaaatgatcatacagggtctctggtttgagagagattcatctctctggatgctaccatccatgaatgataatcttctagatcatctgaagggcagaggagtttcaacaattccagccttactaggtctctctcgtgaagaattacataggttgcttcaaccattttctgcttctgagttgtaccaggatctgcagcatttcccttgtgtggatgtaaaacttaagcttcagaatgaagataaggaccagtccaggcctccaattttaagcattagattgcaaatgaaagatgcgcgccgttcaacatcaagagcgttttcccctagatttcccaaggcaaaacaagaagcttggtggctggtccttgggaacattagaagttcagagctctatggtctgaaaagaattaattttatggatcgggtggttaacactcggatggaattgccagcaatgtttgatatacaggagacgaagctaattttggtgtcggattcctaccttgggtttgatcaggagtactcacttgggcatcttgcaaagggtgtgtga</cdnaseq> |
| Protein Sequence |
<aaseq>FYLQYSSVEAYNEMLRRHMNESEVINMVAHSSEFENIVVREEEQ DELESLFKNACPHDIKGGPTDKHGKISILIQVYISRAPIDSSSLHSDAQYISQSLARI MRALFEICLRRGWSQMTSLLLEFCKGVDRKIWPEQHPLRQFDRDLSHEICKRLEEKHV DLDRLYEMEENDIGALIRFSHLGKVVKQYVGYFPYVNLSATVSPITRTVLKVDLLITP EFLWRDRHHGMSLRWWIIVEDSENDTIYHSELFTLMKKARGAPTKISFNVPIFEPHPP QYYIRAISDSWLGAESLFTVSFHNLTLPQTQITHTELLDLKPLPLSALGNKTYQDLYR FSHFNPIQTQAFHVLYHSDNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVVYIAPL KAIVRERMNDWRQRLVTQLGKKMVEMTGDFTPDMMALLSADIIISTPEKWDGISRSWH SRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSIRFVGLSTALANAR DLADWLGVRDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPD KPVLIFVSSRRQTRLTALDLIQLAASDEKPRQFLSMADNSLDMILSQVSDTNLRHTLQ FGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGK TKRYIDYDITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESNLRE HLHDHINAEIVSGTISNKEEAIIYLTWTYLYRRLVVNPAYYGLEDTETYTLNCYLSRL VETTFEDLEDSGCIKVDDHSVKYLILGKIASQYYLSYLTVSMFGTNIGPNTSLEAFVH ILSASAEFDELPVRHNEDNLNRTLCGKVPYSVDQQHLDDPHVKANLLFQAHFSRAELP ISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSALTCMHLLQMIIQGLWFERDSSLW MLPSMNDNLLDHLKGRGVSTIPALLGLSREELHRLLQPFSASELYQDLQHFPCVDVKL KLQNEDKDQSRPPILSIRLQMKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYG LKRINFMDRVVNTRMELPAMFDIQETKLILVSDSYLGFDQEYSLGHLAKGV</aaseq> |
| Gene Sequence |
<dnaseqindica>10780..10863#9919..10050#9234..9383#8158..8328#7861..8028#7634..7729#7029..7091#6754..6919#6594..6661#6079..6222#5832..5987#5692..5757#5348..5539#5117..5266#4211..4301#3539..3627#3285..3347#3045..3170#2877..2966#2687..2809#2249..2365#1964..2164#1145..1225#891..971#684..785#380..604#142..297#2..70#cttttaccttcagtactccagtgttgaggcttacaatgagatgcttcggcgtcacatgaatgagagtgaggtaaggttttatctctttttgtttggttgatgcttgtgaggttgtactaatcattctggatactgcctcaggtgattaatatggtggcccattcctctgagtttgagaatattgtagtaagagaagaagaacaggatgaattagaatccctttttaagaatgcatgcccacatgatattaagggggggccaactgacaaacatgggaaaatttcaattctcatacaggtatctattggataactactgtttttccaatgtcttgagcctaacaactttctttaaccaatcactggtatcaattttgcaggtttacatatcgcgtgctccaattgatagctcctctttgcactctgatgctcaatacattagtcaaagcttggctcgcattatgagggcattatttgagatttgtctgcgccgagggtggtctcagatgacatccttattattagagttctgcaagggtgttgaccgcaaaatatggcccgaacaacatccacttaggcagtttgacagagacctttctcatgaggtttgttatctgctacagctgaccaataatttacatttttatgtgtttgctaatattttttatgtgttctctgaattagatatgtaaaagacttgaggaaaaacatgttgatctggatcgtctttatgagatggaagaaaatgatatcggagctcttattcggttttctcatctaggaaaggtatgcccttacttaagaagtggtacctgtaacttgcaaggttgatttgaataccgcaatcgctgaagagtactgactaatgaaatttacattcttttgctgaaggtggttaaacaatatgttggatactttccatatgtcaacttatctgctactgtgagcccaatcaccaggactgttcttaaagtaagggctactgtgacctgtaattatttcttttcttaataaaatttctagctgtgggggcctcctctactgtggtcttggtaacaaaataagtaagggctaatgctaattgattaatctgaaagaaataccaaattagttgattatttatgccttcatctcttgctttgtaggtggaccttcttataactcctgaatttttgtggagagatcgtcatcatggcatgtcgctacgatggtggattattgttgaggtttattactttgcatatattattttgatgctcctgccgctacatcattttagagttgtagcataacatatcttccaccattttgattgtcttattgcttcgatgaaatattctcttatagtcttgttagagatcgctttttttgttgactctgttcagtactgtatgaagtatggaactatggataatgcacctctttttttagtatgaatgttttgaggattccaactatattggacagtgatattgattcgtggatagcaaattagtaactccagagacagttataaatctcaccatcttcctcagcaaccttgtccatcaactgtatcactcatgcggttatactaaaagctaacacagtgttgtgggccacgacaaatatcaaataaatgtatcataaattctgagtgtaagaaatgcaaaattattattttgaaagaaactaaaacgctatagatgtagtcacttaggatctacagataatgcaatcctttttccccgcaaaagatcctacaaattcacagaagggtgatagtatagagtgctagaggctagtattatcaccaccaactcttgtttttaagtggtagaggatatacgaagcatgtatattcccttttatatgtttttaatttgatcctgtagaactctatctatatttatgtcatgcattaatgtatttaccaccaagtgatttaggaaaatgcgttggtaacattcagttttattttccaggattctgaaaatgatactatttatcattcagagttgttcacactaatgaagaaggcaagaggagcacctacaaagatttcttttaatgtaccgatctttgaacctcatccaccacagtactacatacgggccatatcagattcctggttaggagcagagtcactgtttactgtttcttttcataaccttaccttgccacaggtgaattcgacgatgtcttgctgtagttctataatgttttcttttgacttatcatatactgaagttttcaggtgttctttacagacacaaataacacacactgaacttttggacctgaagcctcttccattgagtgctcttggcaacaagacgtatcaagatctatacagattttcccatttcaacccgatacaaacacaggttcgattgaaaatcaaattatcttgcgttttagttgtccatgttacatctgcatgttataaagatgactgtaattacactgcataacctttctatttggctggaagtggaagacttcattatgaaaggctcataaaatcaagaatcaagaaaaaactttgattaaaaaaagaatcaagaaaaaacaaccagaagctcatgctgtgaatttcttttactatataatggccaatgcatatatctgttaatgcatgcagactccacttgaattttcttttttatatgtttgctttttataatctgatgttatctttttttcaggcttttcacgtcctctatcacagcgacaataacgtactcttgggagctccaactgggagtggcaagacgatttctgcagaactagcaatgcttcatcttttcaacacacaaccagacatgaaggttagttcattaaatacttacaatgagctaagattgtttctggaattgattttcaacaccctttcaggtagtttacattgctccattaaaggctatagtacgggaaagaatgaatgattggagacaacgtcttgttactcagcttgggaagaagatggtaaagggcaatctgttcttctaattttccaatacaccaatatatatataacttatctcaagtaatgtgctttggcaggttgagatgactggcgacttcactccagatatgatggccctattatcagcggacatcataatttctacccctgaaaagtgggatgggattagtcgtagttggcatagtagaagttatgttatgaaggtatgagtttttcactttctacattagctttaactatttgctgatttgtaattttgctttactttgtgataaataacacttctattaagtatatcttgttaagcctgttaataggttgggctcatgatattagatgagatacaccttcttggagctgaccgtggccctattctcgaggtatcatttctggaagtcaaagacatgcaacacatgttatggtccataagtaacttcatttactttaactctatctcagggcaacataatttattgtcttctgcattcatcttaatcccatctattcatgctgtgcttgtttttcaaagttatctttttgccaattgtttaccatgatgattttttttcaggtcattgtatcaagaatgcgatacatatcatcacaaacagaacgttcaattcggtttgttggtttatcaacagcattagccaatgctcggtatgttactaagggaaactttggcatgcaatcctcttatcccctatcacataggaataccttctacatgactagttctatatagatctgtatgctgtccacaaccttctatacatgtatttttgctccatggattgcagaagtctagtcacatcaactgttatgagtggttactgccttacttgtggttgatggtattgttaaccctggttgttggagtcctgatcatgatcaatgttacattgattttgattttgattttgatttttgtgttagattggtgtgaattttaagctcttgaaaattttattagtgcctccatccaaaaatataatttctagcgttcaaaatttgcctcaaaatatagcaacttctccacctactccctcatctcatgcaatcacaaccgatctctaattaaatttccccaccatcctcatctcaaccaatcacagccctctcctcatttaatttcacctacttccttaatacccgtgcagaactccaaaaaggttgtattgactgtgcacttgtgcactattttcctttggctgacatctttccatttgtcatggtacttcagtgatttagctgattggttgggcgtgagagatgatggtctattcaatttcaagcccagcgtgaggcctgtacctcttgaagtgcatatccaggtaagtaggattttcacattaactgaagctcctattctggctcaaaaagagctaacacagacttttttttagcacagccatttgccccattgtattgctaactttacctggaaaatgcatcaagctgttgttttcaatatatgtacacacacacacatgcacatttctcttacaatggattagtatttgttttgatgtattcttgaatggttcttaagaaaagagaaaagactaaaaagagggtacaactaggtccatgttgcattttgctcaagcaggtcactacatttgatttttagtgagcaaacctaatgagggtggtgtgaaatgcttgtaagtcgtaagtaatgctttgcacctcttctagttgcttaacggatgcgagat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