Difference between revisions of "Os03g0216800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0216800|
Description = Similar to Polygalacturonase B (Fragment)|
Version = NM_001055922.1 GI:115451572 GeneID:4332070|
Length = 3069 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0216800| | GeneName = Os03g0216800| | ||
Revision as of 19:30, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0216800 |
|---|---|
| Description |
Similar to Polygalacturonase B (Fragment) |
| Version |
NM_001055922.1 GI:115451572 GeneID:4332070 |
| Length |
3069 bp |
| Definition |
Oryza sativa Japonica Group Os03g0216800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:6179450..6182518 |
| Sequence Coding Region |
6179509..6179754,6179874..6180011,6180093..6180263,6180369..6180389,6180463..6180670 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:6179450..6182518 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:6179450..6182518 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggtcccaggaagcttcatctggcctccatttctgccctatcaatctttctctacgtgtttgctcacaccaattcagcacaagccttccccgtcgctgacggcacgtaccctcctgaagctgaaggcccagcagcagaaagttcagacatggacgagcagctggagctcacccctggaccgcagccgagggtcgtcgacgtcgacgactacagagcgagagccgacgccggcgaccacacggaggcgtttcttcaggcctggaaggaggcctgcaactcctccgattacccatccgtgctcctcgtgccggaggggaagacatacctcctgatgcctgtaagcttcaatggcccctgcagagccaccacgatcactgcaacgataagggggacgctggaggctccatcgaatcgatcggtttggctcgatcgcgatctgcaggaatggatcacgttcgacaacatcgatcacctccgtgtcctcggcggcgggacgctcaatggcaatggacaccaatggtggatcaactcttgcaagaccaacagatccatgagatgcgtcaccggcccaacggcgctgtacttcaggaggtgcaaccatctggtcgtggagggcctccagatcagggacagcatgcagatgcacgtcgtgatcgcctactcctggagagtgctggtctcgaggctgctcatcacggcgccaggatggagccccaacaccgacggcatccacgtatccaacagcagggaagtgttgatgagtggctgcatcatcagcacaggtgatgactgcatatcaattgtgaccggctctatgtttatacgggcaactgggatattttgtggaccaggccatggcataagcattggtagtctaggagcaaacaaatcatgggcccatgtttccgacgtgctggtggagaaagctacactggtgggcactaccaacggtgtgcggatcaaaacttggcagggaggagatggccatgcagaaaggattacctttcaagatataacaatgcacaacgtcactaacccggtgattatcgatcagaattactgtgactccatgacaccatgtcatgaacagggatcagctgtcgccataaataacatacgctacaggaacatacgtggaactagttcttcaaaagtcgccatcaacttcgtctgcagcaactctgtccattgtgatggcatagtgatgcaggatgtttctttggttggagaaggatcctacgtttcttgttcgtacatgaatgctagagtggtagagttggggtataacttcccgtattgcagagcggaaatgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MGPRKLHLASISALSIFLYVFAHTNSAQAFPVADGTYPPEAEGP AAESSDMDEQLELTPGPQPRVVDVDDYRARADAGDHTEAFLQAWKEACNSSDYPSVLL VPEGKTYLLMPVSFNGPCRATTITATIRGTLEAPSNRSVWLDRDLQEWITFDNIDHLR VLGGGTLNGNGHQWWINSCKTNRSMRCVTGPTALYFRRCNHLVVEGLQIRDSMQMHVV IAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIR ATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERI TFQDITMHNVTNPVIIDQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKVAINFVC SNSVHCDGIVMQDVSLVGEGSYVSCSYMNARVVELGYNFPYCRAEM</aaseq> |
| Gene Sequence |
<dnaseqindica>60..305#425..562#644..814#920..940#1014..1221#1331..1412#1632..1740#2568..2684#2771..2995#atcatcagtaaatcactgggttaatctctcctctcttaagttctagctactgctacaatatgggtcccaggaagcttcatctggcctccatttctgccctatcaatctttctctacgtgtttgctcacaccaattcagcacaagccttccccgtcgctgacggcacgtaccctcctgaagctgaaggcccagcagcagaaagttcagacatggacgagcagctggagctcacccctggaccgcagccgagggtcgtcgacgtcgacgactacagagcgagagccgacgccggcgaccacacggaggtgaacgagaccaccccaactgctctgctctctcgaattgcccgagatttctgccgcaatgctgccccgtgtggcaagaattctctgaacttccctgacgcagctgatgcgcgttacaggcgtttcttcaggcctggaaggaggcctgcaactcctccgattacccatccgtgctcctcgtgccggaggggaagacatacctcctgatgcctgtaagcttcaatggcccctgcagagccaccacgatcactgcaacggtgagtgctccgattgctgttcaactactcatcaggatgaatcctccattgctgttcagatcatgacgtttcagagttcagataagggggacgctggaggctccatcgaatcgatcggtttggctcgatcgcgatctgcaggaatggatcacgttcgacaacatcgatcacctccgtgtcctcggcggcgggacgctcaatggcaatggacaccaatggtggatcaactcttgcaagaccaacagatccatggtacttgcccactgtactcgcttacctctcatgaacatttcctcgacatgatcctggctcactcacaaaactccatttttttcttttctttcaaccacggatcagagatgcgtcaccggcccaacggtaccctgtttgatcagaaaatctttgcatacttgcattgcatgagcaatgtgtttcagctggcgaactgcaggcgctgtacttcaggaggtgcaaccatctggtcgtggagggcctccagatcagggacagcatgcagatgcacgtcgtgatcgcctactcctggagagtgctggtctcgaggctgctcatcacggcgccaggatggagccccaacaccgacggcatccacgtatccaacagcagggaagtgttgatgagtggctgcatcatcagcacaggtaccaatggctgtttatgtagattttcagaatgtatcacaaatgactttatttatctgcaaatgttgttcatcactctgttgtacttttgtgttgtgagttggcgtaggtgatgactgcatatcaattgtgaccggctctatgtttatacgggcaactgggatattttgtggaccaggccatggcataaggtacgttatctctagtaagactctgaacttgtatctttctctctatactcgcctatttccatacacaattgggatttgtggtgtataatggtccacgctgggattcagggctacacgtttcatacttgtcgtttccagtaataatcaatttattaaaaacatgcagtagactgtagatagggttttctgatgttttattggcattggtcgctgttgcagcattggtagtctaggagcaaacaaatcatgggcccatgtttccgacgtgctggtggagaaagctacactggtgggcactaccaacggtgtgcggatcaaaacttggcaggtaatgcacgtccaccttgctggattggcttggatggaaaattggagaaatattctgaatttgaaacagcattgttctcagagtcaccctcttgaaccttctgctcccagaaaagagcgatggcgttgatttccaaattcaacaacgccttgacagatgaatttaattataactacatccaagaacagctaagggcctgtttggtttccagggacttatttcaagttcctgtcacatcagatatttagacactaatttagagtattaaacatacactaattacaaaacccattccataactttggactaattcgcgagacgaatcttttgagtctaattacgccatgattttgacaatgtgatgctacagtaaacttttgataattatggattaattaggcttaaaaaattcgtctcgcggattagctctcatttataaaattagttttttactagtctatgtttaatactccaaattagcgtccaaacatccgatgtgacatgggctaaaaagttttagccccatctaaacaccccctaaatatataatgtagtactacgaaattatactagttataagcagtacttgtagttgtaatattgtagtatcttgctaatgcatttcgtacatataagaggtaatctaatatagataaatccactctccttatatagtgctatatactcctatatttctataggtcatatagaaaaggtagttccaaaagcgaaatgtggtattgttggaaaataagaaattttgtgcctaactgctgaaatgtttgttcctgcaatttatgcttcccctcttatcatccttttgacagggaggagatggccatgcagaaaggattacctttcaagatataacaatgcacaacgtcactaacccggtgattatcgatcagaattactgtgactccatgacaccatgtcatgaacaggtactatcctacaataactccgtctcttcttctagagaccgatcagccaagccccagttaacagtgtttggtaaaacattttgcagggatcagctgtcgccataaataacatacgctacaggaacatacgtggaactagttcttcaaaagtcgccatcaacttcgtctgcagcaactctgtccattgtgatggcatagtgatgcaggatgtttctttggttggagaaggatcctacgtttcttgttcgtacatgaatgctagagtggtagagttggggtataacttcccgtattgcagagcggaaatgtagtgtatctgtagtactgcagagcggaaatattattcattctttcgataaataatactccctccattctaaaatat</dnaseqindica> |
| External Link(s) |
