Difference between revisions of "Os03g0230300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0230300| Description = Poly(ADP-ribose) polymerase, catalytic region domain containing protein| Version = NM_001055991.1 GI:115451710 GeneID...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0230300|
 
GeneName = Os03g0230300|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0230300

Description

Poly(ADP-ribose) polymerase, catalytic region domain containing protein

Version

NM_001055991.1 GI:115451710 GeneID:4332145

Length

3171 bp

Definition

Oryza sativa Japonica Group Os03g0230300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6944503..6947673

Sequence Coding Region

6944595..6945496,6945827..6946074,6946156..6946298,6947236..6947334

Expression

GEO Profiles:Os03g0230300

Genome Context

<gbrowseImage1> name=NC_008396:6944503..6947673 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6944503..6947673 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttctccggcgacgtcaagccggcgatccaccggccctctgtcgcggcggcacgcgggggagggaacggtggggcgatcccgctcctgcgtgggtggcaggcgttccggaggagcggcgcgccggcgaggctcctctgcttcgagggcggcgcgtgggcggacgtcgcgggcgaggtggtggggctgctgcggcgggcgttcatggaggggaaggccgtttgcgaggccgcctgcggtgggagggtgttcctgttcgacttcatgcggatggttcggatcgatgaggccaccgccgaggaggccgcgctggggtggatcgacgaccgcggcgcgtgcttcttcccggctcccgagggcgggaggaagaggaagagggagagggacgaggcggggtcggaggtgaagggggaggatcggcggcggcggcagccggcggcggaggaggaggacggggacgaggcgtcgtccggcgtggaggagcggtccggggagagccgccccgaggcggatgagcccgacaggaagaaggcgcgcgggacgttgtgggggaaggcggtgaggctggacgaggcggacaagttctacaaggtggtggagaagctcttcgtcagccggatggctcccgtggcggcggcccgcggcgtggcgatcacggcggtgcacaaggtcgcgcaggggccccgggcaagagccttccatctgcagggacagctccttgccgctgctcgcggcgtcggcgatggcagcaacgccaagttcgcgtggtacggcgcgccggcggcggatgtggccgcggcggtggagcacggcttcgggaggacgaacgggcagtttctcggcgggcgcgcacacggcgacggcgttcacctttcgccgccgcagtaccctcacgctagtgcgatgctgaccaagccagacgagaatggcgaggcacacatcgtgctgtgccgcgtcctgatgggccgtccagaggccgtccctgccagctcaccccaattccaccccagcagcgacgaatacgacagcgccgtcgacaaccttgagaatccgcggtggtacgttgtatggagcacagacatgaacaccaggatcctcccagagtacgtggtcagcttcaggtggcccaacctgccgcagatggaaggatcatcggggttgggatcgaagctgaagaagccatcaccagcagctactcgcgacatgttccctatgcttctgacggagatccagcggttcgttccatccccgaagctgcagactttgcagaggacgtacaactgcttcaagagaggacagatgaagaaggaccagttcatccggttcttgcgctcccacatcggcgacaatgtgttgaccaccgtggccaagaaactccgagggtactag</cdnaseq>

Protein Sequence

<aaseq>MDFSGDVKPAIHRPSVAAARGGGNGGAIPLLRGWQAFRRSGAPA RLLCFEGGAWADVAGEVVGLLRRAFMEGKAVCEAACGGRVFLFDFMRMVRIDEATAEE AALGWIDDRGACFFPAPEGGRKRKRERDEAGSEVKGEDRRRRQPAAEEEDGDEASSGV EERSGESRPEADEPDRKKARGTLWGKAVRLDEADKFYKVVEKLFVSRMAPVAAARGVA ITAVHKVAQGPRARAFHLQGQLLAAARGVGDGSNAKFAWYGAPAADVAAAVEHGFGRT NGQFLGGRAHGDGVHLSPPQYPHASAMLTKPDENGEAHIVLCRVLMGRPEAVPASSPQ FHPSSDEYDSAVDNLENPRWYVVWSTDMNTRILPEYVVSFRWPNLPQMEGSSGLGSKL KKPSPAATRDMFPMLLTEIQRFVPSPKLQTLQRTYNCFKRGQMKKDQFIRFLRSHIGD NVLTTVAKKLRGY</aaseq>

Gene Sequence

<dnaseqindica>93..994#1325..1572#1654..1796#2734..2832#acttgatcccgatcgccatttctccacctgcacatctgcgcgcgcgcgcgggagagcagaggcggcgagagagatccgggtcgggaggggtgatggacttctccggcgacgtcaagccggcgatccaccggccctctgtcgcggcggcacgcgggggagggaacggtggggcgatcccgctcctgcgtgggtggcaggcgttccggaggagcggcgcgccggcgaggctcctctgcttcgagggcggcgcgtgggcggacgtcgcgggcgaggtggtggggctgctgcggcgggcgttcatggaggggaaggccgtttgcgaggccgcctgcggtgggagggtgttcctgttcgacttcatgcggatggttcggatcgatgaggccaccgccgaggaggccgcgctggggtggatcgacgaccgcggcgcgtgcttcttcccggctcccgagggcgggaggaagaggaagagggagagggacgaggcggggtcggaggtgaagggggaggatcggcggcggcggcagccggcggcggaggaggaggacggggacgaggcgtcgtccggcgtggaggagcggtccggggagagccgccccgaggcggatgagcccgacaggaagaaggcgcgcgggacgttgtgggggaaggcggtgaggctggacgaggcggacaagttctacaaggtggtggagaagctcttcgtcagccggatggctcccgtggcggcggcccgcggcgtggcgatcacggcggtgcacaaggtcgcgcaggggccccgggcaagagccttccatctgcagggacagctccttgccgctgctcgcggcgtcggcgatggcagcaacgccaagttcgcgtggtacggcgcgccggcggcggatgtggccgcggcggtggagcacggcttcgggaggacgaacgggcagtttctcggcgggcgcgcacacggcgacggcgttcacctttcgccgccgcagtaccctcacgctaggtgagtttcccaaatgctttcaactctttccatctgcaaatgctttgaactattggggagaacatttttagtaatttctgaaaattcaccaagtgcctcatatatttcatctttcgatattaccatacgaatcttgagtaaaattattttctgcctgccatcttggtgctaaacaatgaaactaccaatcgttgttttgcatctaagtttgaatttagagcaaattagacagtatggtacagtagctacctaaattgttataaattgggatgaaatttgtgagtcaatgttcaactaagttaacgagttaattaacttgtcttcgagcagtgcgatgctgaccaagccagacgagaatggcgaggcacacatcgtgctgtgccgcgtcctgatgggccgtccagaggccgtccctgccagctcaccccaattccaccccagcagcgacgaatacgacagcgccgtcgacaaccttgagaatccgcggtggtacgttgtatggagcacagacatgaacaccaggatcctcccagagtacgtggtcagcttcaggtggcccaacctgccgcagatggaaggttggtctctcgtgtctgaaatttgctggatggaactgttcccatttggcactgccataacagtgaaactgtggttttcaggatcatcggggttgggatcgaagctgaagaagccatcaccagcagctactcgcgacatgttccctatgcttctgacggagatccagcggttcgttccatccccgaagctgcagactttgcagaggacgtacaactgcttcaaggtaaactggtacttcttgctgagcatttcatttctagatagatgattgattagaatcttgcgctagcttacacaaaacaaccccttcgcgcttatgatcatgcctgtaagtcaaaatttaatataagagttgattttgtggtttttttagttgtttattttaccgcatgaacacgtataaaaaaggttttactatacctttttttggttaataaattgtttggataagtaaaagcgaaacaatgggctgaaacacaactgctgatctgctaggtgaatttaggccctgtttaattcagcttaggattattataatctggattattaggattaagctgaaacaaataagtagattattatgttagattattataatttataagccagattactataatataataatctcctctagaggagcttagattactataatctaataatctcctctagagaagctttttctagattattgagtagctaaagacccactacccttagatgcctctaataatccagagaaacaaacaactcgtagcttattttatgttagcttattataattcagcttagagtaatctgatttaataatttagattacaataatcttaagctgaaacaaacggggccttagtcttacatatagttgaacaattttgctctgcctggtttgtgttgtattcaggtctaactcttcactatacgcaataattagcacgtaaaaatgttgatttgtaccgcactgctatggttttaatatgatcatgccgactttattctgtagtaatatgctgccgactttattctgtagtagaacagaatcatctacctgtcaatattctgtgcaaagcgaattcagctcagcataacggcgttataactttaagcgaagctgaagtcctgaaaatccaatgacataaattttctttttgtttcagagaggacagatgaagaaggaccagttcatccggttcttgcgctcccacatcggcgacaatgtgttgaccaccgtggccaagaaactccgagggtactagtgcaaggtgcaaatttgtctccactccgtggctgaattcgactaactccgtagaatcgaacagtgcgtgtcgtgtaccaatcctgacagggtttattctcttctgatgctgctttagtttttccggtgctcaaatgtttattgtcatgaacatagagggggtttactgtgatcttccaattaaccaacacaaaagggtatatgtgatatgatgcaaattatgcaattcttgagttcggtcatagttttacttattttcagcaacttgtaatttgtacagactcgattctgttgagcttttgattcaggaaacaatcaattcagtttcgggagtttacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0230300, RefSeq:Os03g0230300