Difference between revisions of "Os03g0239000"

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(Created page with "{{JaponicaGene| GeneName = Os03g0239000| Description = Glycoside hydrolase, family 16 domain containing protein| Version = NM_001056038.1 GI:115451804 GeneID:4332198| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0239000|
 
GeneName = Os03g0239000|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0239000

Description

Glycoside hydrolase, family 16 domain containing protein

Version

NM_001056038.1 GI:115451804 GeneID:4332198

Length

3086 bp

Definition

Oryza sativa Japonica Group Os03g0239000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7388970..7392055

Sequence Coding Region

7389074..7389548,7391216..7391424,7391563..7391663,7391751..7391982

Expression

GEO Profiles:Os03g0239000

Genome Context

<gbrowseImage1> name=NC_008396:7388970..7392055 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7388970..7392055 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggctcgctgttccttgctaccgatcttggccgccgtcctcttggcggcgtcgctgtcgctgccaccgcgcgctgccgcgtacgccgccatggtggacagcctcctccccgcgtcagcgacggctctctccttcgaggaaggctacacccagctgttcggcgactccaacctcatgctccacggcgacgggaagagagtgcacatctccctcgacgagcggacaggcgccgggttcgcctcgcagggcgcgtaccaccacgggttcttcagcgccagcatcaagcttcccgccgaccacactgccggcgtcgtcgtcgctttctacatgtcgaacggggacgtgtacgagaggacgcacgacgagctggacttcgagttcctggggaacgtgagggggagggagtggagggtgcagaccaacgtgtacggcaacggcagcacggcggccggccgggaggagaggtacggcctctggttcgaccccacccaggacttccaccgctacgccatccgctggagccatgacacgatcatattctacgttgacgagacgccgatcagggaggtggtgaggacggcgtccatgggcgcgcagttcccgtccaagcccatgtcgctgtacgccaccatctgggacggctcgagctgggccacctcgggcggccggtacaaggtgaactacaagtacgcgccctacgtcgccgagttcaccgacctcctgctccacggctgccccgccggctccccgccgccgtgcgagggcgccgccgcctccgcgacgatgccgcccgggcagcggtcggcgatggagaggttccgggcgaggcacatgacgtacgggtactgctacgaccgcgtccggtaccacgcgccgctgccggagtgcagcgtcggcgcggaggccgaggcgttcctcccgtccggcgaggcgaggtcgacggaccgccgcggcggcaggcacggcaagcgccaccggcgcgccggcggcggcgtggattccgcgctctga</cdnaseq>

Protein Sequence

<aaseq>MAMARCSLLPILAAVLLAASLSLPPRAAAYAAMVDSLLPASATA LSFEEGYTQLFGDSNLMLHGDGKRVHISLDERTGAGFASQGAYHHGFFSASIKLPADH TAGVVVAFYMSNGDVYERTHDELDFEFLGNVRGREWRVQTNVYGNGSTAAGREERYGL WFDPTQDFHRYAIRWSHDTIIFYVDETPIREVVRTASMGAQFPSKPMSLYATIWDGSS WATSGGRYKVNYKYAPYVAEFTDLLLHGCPAGSPPPCEGAAASATMPPGQRSAMERFR ARHMTYGYCYDRVRYHAPLPECSVGAEAEAFLPSGEARSTDRRGGRHGKRHRRAGGGV DSAL</aaseq>

Gene Sequence

<dnaseqindica>2508..2982#632..840#393..493#74..305#agcacacgaaacagagggaagcagagtagccgagagcgagcgagagacgcagagaagcgagcagggcggggccatggccatggctcgctgttccttgctaccgatcttggccgccgtcctcttggcggcgtcgctgtcgctgccaccgcgcgctgccgcgtacgccgccatggtggacagcctcctccccgcgtcagcgacggctctctccttcgaggaaggctacacccagctgttcggcgactccaacctcatgctccacggcgacgggaagagagtgcacatctccctcgacgagcggacaggtaggtcatgcatcagccgcatcgatgcaatggccaatggtagcctctgttcatgtcgtgtctcaccgtgctggcgttctgtttcaggcgccgggttcgcctcgcagggcgcgtaccaccacgggttcttcagcgccagcatcaagcttcccgccgaccacactgccggcgtcgtcgtcgctttctacgtaagtatcaccaactccttgcgaaccaataggtgcaaatgtgcaatgcggcaagaaatcttaatactgaagttagcactcgatagcttgggtttatcgcgatgcatggttgtgacggcattgtcgttttggccgcagatgtcgaacggggacgtgtacgagaggacgcacgacgagctggacttcgagttcctggggaacgtgagggggagggagtggagggtgcagaccaacgtgtacggcaacggcagcacggcggccggccgggaggagaggtacggcctctggttcgaccccacccaggacttccaccgctacgccatccgctggagccatgacacgatcatgtaagataaccgatccgccattttagctcggttttactcttcgataatgcagcgtgtcagatgtcactgtgcagtctctggctcgccataagagcttgcctacatcagtatatcacgcttcacaagcgttgagattcacaaacgcttcacgaacttcagagatactcagtatatattctgcagactcactagagttatgtatctgtcatcagtatatcagaatatatgataacattattctgtgatacgctgatagcagaatggtgaaatgacagttttcttcttctgaaaacgaagccagcgtctgctagtgttatattaagcagaacactcctatacgtactattttttccatactaaatttttactaacaatcatcttaacggtttaatttaggtagatggaagttatgaaaaatctagatgcattcctagcatgacacattgttttagtaagaatttagtaagaaaaagttagtatgtatagccttttcccataaaagattagaagagtacaatgtcagttaactaccctctgatgtcatattgtcatacttgcagttcttcattgtgctaaactagtaatagtgcaattctgcatagtgattgtgttctttctattatggtgtgttgtgtacctcaacaaattgatattcactatcactattactttttgtatgcttgcattccttccttttctttattttctggttatcatgggccatgattgggagatatcagtttgctcttcctttacagcttatagattccttgtgctgtttacactttgataggagtaataagtagaggccccaaaactgagatgggcattatcacaatatttttctgatttagttaaccacagcaatcactggactctgaaattctgtaaccaaatcactgcaaattactgatgcaactgctctaaaaaacattgatgcatcctatactgctacacgcgagatcgtgtgaaaaaagttgacatcacatgtggtgcgtttgcttttacagtttccactgaacctgagcattgatcataccatgtgcatgataactctctatcaatatatctgatatccttccaccgagatccccgtgccaaccttttctcgcatataattgcatttgataacctactttctccgctaacctgcataacttctgtagttgtgcgatcggtcataggcgaacttctgaattctttgtatctgtgtcgcatgatggaggagggaaatgtcagcaccgggagctactttctatccattgtttcaaaaactgccacccactttcctccgtgtttttctccatgaaatctgttagattcgtgggtgacaatgacgtctttattttgccaaaaccgaaattcattactagccactacacgtggccaaagtctgaacttctcaaagttttcactgccaacctattggtttcagagttcaagagttcagagatacagggttcatctgcctctagtaatctagtttacccttctactcctacagaaccaactgtcaatcataaaatcaaaatttactgaactactcctacagaactacggagtaaaactgtgtcatgtgtgacactgcaataatgtagagcaggatcagtaaccttcacttccttgttcgttgcacggttgtactgactgtcctgtccattatgcagattctacgttgacgagacgccgatcagggaggtggtgaggacggcgtccatgggcgcgcagttcccgtccaagcccatgtcgctgtacgccaccatctgggacggctcgagctgggccacctcgggcggccggtacaaggtgaactacaagtacgcgccctacgtcgccgagttcaccgacctcctgctccacggctgccccgccggctccccgccgccgtgcgagggcgccgccgcctccgcgacgatgccgcccgggcagcggtcggcgatggagaggttccgggcgaggcacatgacgtacgggtactgctacgaccgcgtccggtaccacgcgccgctgccggagtgcagcgtcggcgcggaggccgaggcgttcctcccgtccggcgaggcgaggtcgacggaccgccgcggcggcaggcacggcaagcgccaccggcgcgccggcggcggcgtggattccgcgctctgaccgattctgtgatccgcacagcgccgctcgcgatggtggcgcgcgtgctcgactgtactatcgtgccgtgtgtgatgtcgtacgtgattatagtttcctggtct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0239000, RefSeq:Os03g0239000