Difference between revisions of "Os03g0239400"
(Created page with "{{JaponicaGene|
GeneName = Os03g0239400|
Description = Similar to Transcription factor HBP-1a(C14)|
Version = NM_001056041.1 GI:115451810 GeneID:4332201|
Length = 11523 bp...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0239400| | GeneName = Os03g0239400| | ||
Revision as of 19:31, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0239400 |
|---|---|
| Description |
Similar to Transcription factor HBP-1a(C14) |
| Version |
NM_001056041.1 GI:115451810 GeneID:4332201 |
| Length |
11523 bp |
| Definition |
Oryza sativa Japonica Group Os03g0239400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:7407417..7418939 |
| Sequence Coding Region |
7407925..7407981,7408248..7408373,7409577..7409654,7409749..7410011,7410532..7410574 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:7407417..7418939 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:7407417..7418939 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggaaaaggagaggtagccactaggtccaaatctcaaaaatcatcggcgacacagaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttcaggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaaatgtggctccaagtcctcaggggcacccatatatgtggggtccacagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggacaccatatcagcaggcacctatgctaccgggttcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcctacatctgctggcggaacagagacagataagtcaggcaaaagtaagcggaagactcccctgaagagatcgaaaggaagcttaggtaatcttgatgtagttgcaacaaaaaataaaaaggcgcccgcaaaaccttcagcatcctcatccaatgaaggttcttcacacagtgagagcggaagtggaagttcttctgaaggaagcagtacaaattcaaaaagtggttcaaggacaaaggatggttctgagcatggccagggtaatgatgctagcaacaaaggagctactgctcagagttctgcggttgagcccgtacaagcatctactgggccagttgtgcttaaccctatgatgccatactggcctgtccctcctcccatggctggcccagcaactggtgtaaacatgggaatggattactggggtactcctacttcagtacccatgcataataaagttattgcagcaccagcatcagctccttcatcaaactctcgtgatgttgttctcagtgatccagccatacaggatgagcgagaactgaagagacaaaagcggaagcaatcaaatagggaatcagctcgacgttcaagattacgcaagcaggctgaatgggaggaagtagccaatcgagctgatttgctaaagcaggaaaacagctcacttaaggaagaattgaaacaacttcaggagaagtgcaatagcttgacctcagaaaatacaactttacatgaaaagcttaaagagcttgaaggcgagaaatcaaatggaaactggtataaagagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MGKGEVATRSKSQKSSATQNEQSTPTNPPTAYPDWSQFQAYYNP AGTAPMTPPGFFHPNVAPSPQGHPYMWGPQMMPPYGTPPPYAAMYAQGTPYQQAPMLP GSHPYNPYPGQSPNGTVQTPTSAGGTETDKSGKSKRKTPLKRSKGSLGNLDVVATKNK KAPAKPSASSSNEGSSHSESGSGSSSEGSSTNSKSGSRTKDGSEHGQGNDASNKGATA QSSAVEPVQASTGPVVLNPMMPYWPVPPPMAGPATGVNMGMDYWGTPTSVPMHNKVIA APASAPSSNSRDVVLSDPAIQDERELKRQKRKQSNRESARRSRLRKQAEWEEVANRAD LLKQENSSLKEELKQLQEKCNSLTSENTTLHEKLKELEGEKSNGNWYKE</aaseq> |
| Gene Sequence |
<dnaseqindica>10959..11015#10567..10692#9286..9363#8929..9191#8366..8408#7475..7526#7236..7402#6913..6972#6733..6816#6349..6453#6208..6267#6075..6131#gtttttccccttcacaatcagagcgaaatcgagagagagggcggcggcggcgacttcgtgcgcaagagggaggcggcggcgacttcgtgcgcaagagggcgtgccacgggccagcgacgccagtgtcctcccttctccatcctccttcctctcatccctcctcccgccgatccctttcccttctccatcctccttcctctcatccgccgccgcgccggctcgtggctgagctgctcctgcacctcctcctcccagtcccgcgcccgcagctcccgcctctccccccgcttcttccgcctctcccgccctgtcagctccccctcacctccatagccaaggtaaggaaaccctagcagtgtgtaccatctctgatattttgtttataatgctagatctgcgcgattccgtttgcatgatatgaatgtccttgctgtcaacatctgttcaagcacactgcaatattttcgtttatcaattattacacagtagttattttcctgacgtgaacaagtattactatgtgatttgggcaagtattttttgatgagatgatttatgcttgagcatgacatggcaacgtgtttatttttctttgattgttgtattgtagatggataagaggaccaaggttttaatttttgctgcttctgccaatctattgttgtcaatgatggccatgattattcattctaggaaaagaaagatagtttctaggagggaaggtgttaaatatgacccaatggttgaaagggataggatgagaattgagtatctaaacacaaaaatttggaggaacgataacatgcttagacttagaaaagattctttctttcggttttgtaagctctttagaaatcgtggtttgcttgaagataccatccacatgtctattgaggaacaagtaactatgtttctaaatacagcagggcacaatcttagaaatagataagttggcactaattttgataggtccggagaaacagttagttgttatttcaacaagtgcttcatactgttggtgagctgcgagatgaactaatcaggcctccctcattggacaccccaagtaaaattgccgggaaccctaggtgggatccttactttaaggtgtgagattcatctgtgtctcattttcaattttatattttaacaaacctcaatgtcccctgatcttttatggtgttgaatataaaataggattgtatggagctattgatggcacacatattagagcctctgttcagaagaatatcgagccctcttttcgtggtaggaagtctcatgccacgcaaaatgtaatggcaactatagattttgatcttcggttcacttatgtcttggttggttgggagggtatagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttataccccaaggtaatagattaatttagttcatcaatttctccatctcaatagaaatgtgaccaacttgtccatcatatgataggaaaattctacctagttgatgctggatatggagccaaaccaggattcctccctccatttgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgaggagttgttcaactttaggcactcgtcccttcgtgtcacagttgaacgtgcatttggggcactaaagaggaggttcaaaattctagatgatgccaccccattctttccttgtccaactcaagtagatattgttgtagcttgttgcattattcataattgggtcatgaatgatggaattgatcagtatattacagatccattagatttgataagtgaacccacaaaagagtcatttgggtaggcaacagagccatctacgtttaaaaagtttggctagttgcattcttcgatggtgtctgtcccataaaggatgggtgctaagtttataaattttcttaggcataattaaattcccacaaattggataaattgaagtcatatgtccactgtcacccagacgattaaaccactcaagcattcatacaagtaaaaacaaatattaagtattgtaatgacgacgttttctgaagtgatagtagcatcaaacggatatgcatcaaaagaaaaccaacataagaaagataggaggcacataaaaaatgccaaacccacggatcctccacagcaattccatattctaaatcctcaaatcgcgccacggggacatcgagcagatctacccagaaccctcgccggcttagaattcacgaccggattcggattccaccgcccgcacgagcgaaaaaaaagaccagaaacaaatcgagagcttaagtcacacggtttactgggagggagggaggtcgaggcgctcgcgacggatctccactccacgccaatccagcagaggctgggcggcggcgagaggggaagcgcctcgaggtggcgccgcttgctccagcgggaggctgcccccgggttggggagcacttggatttgcgaaatttgggggaggtgtggcgagggagggagggaggtagaggcgctcgcgatggatcttcactctgcgccaatccaacagaggcggggcgacgacgagaggggaagcgccccgaggcggcgccgcttgctccagcgggaggctgcccccaggttggggagcacttggatttgcgaaatttgggggaggcatggcgcatgagaaagagagaggagaggaaaaaagttggtctaaaggcgtactccaatcacgagttcacgtagtccggaaggtgacctcctgagagagagggcgaataaaaaaacaagaagaagagcagctaagacaagtgtgtggtttgttggttgtgtgtgggcctggagaaaaagaatgcctggcccattacagaccgattccgcttccggctacagtaccatactaccatgtgctccaattggcacaatactaagctttttctttgcaattaaaaaaggacaactttttaaatccaaaattttcacatttaaaaattttggatttacgaatagatctaagtatatattttttagtttactttatcaaacaacgaaagtgatgaacccctacatacccctacaaataattaatttttaaaaaggcatgtttagtttcaagtcacctgaaaatacataaatctcggtcttttttagaccgtcaagatttcatccaaattcatgtggactttttctctcccccttatatcttctcttctatcgaaaggatggatgcacacaagcacggaacttatgtttggtttggggacctggtgggatgggttaggtccattaagggggagagaaaaagtccacatgaatttggatgaaatcttgacggtataaaaaagactgagatttgtgtattttcaagtgacttgaaactaaacatgcctttttaaaaattaataatttgtaggggtatgtaggggttcttcatcactttcgctgttcgcttaagtaaactaataaaaatatacagagctattcgtaaatccaaaatttttaaatgtgaaaattttggttttaaaaagttgtcatttttaattgcaaagagaaagcttctatactgtgccaatcggagcacatggtagtatggtactgtaaccagaagcgggctcgggctttaatgggttgggcatttttttctccaggcccacacaaccaacaaaccacacacttgtcttagccgctcttcttctttttttttattcaccctctctcaggaggtcaccttcccgacgacgtgaactcgtgatttgagtgtgccttcagaccaatttttttcctctctctctttctcatgcgccacgcctcccccgaatttcccaaatccaagcgctccccaacctgggggcagcctcccgctggagcaagcggccgcctcagggcacttcccctctcaccgccgccccgctctgctggattggcgcggagcagagatccatcgtgagcgcctctacctccctccctcccagtaagccgtgtgacttaagcttctagtcttcttttcgcccgcgcgggcggtggaatccgaatccagtcgcgagttctgagccggcgagggtgctgggtagatctactcagtgtccccgtgacgcgatttgaggatttagaatgtggaattgccgtggaggatccgtgggtttggcgcttttttttttgcctcctgtctttcttatgttgtttttttttctgatgcatatctgtttgatgctacatcacttcagaaaacgtcgtcattacaatacttaatatttgtttttccttgtacgaatgcctcagtggtgtaatcacgtgggcgacggtggaaatcaatttatccagtttgtgggaatttaattatgcctgagaaaatttataaactaagcacccatcctttatgggacagacaccatcgaagaatgtaactagccaaactttttaaacgtagatcaccaatacggacacaagtattttgattaccacttaagtttactacggagtaccatgttactggaaaactactgttagagaagtgtgtcggaaaccgtgtcaaaatctgagataccattattcatgcatatggaaaataattatggagtggccaaacccctaatgctggggttcagtcccgtgtcatggctagttggctacacggtcctgtgctcccaccactaaaaactaagcccagttctgctggcatacagatagactcatcctataaactcttaatcaactgaaatatttctacacctggctgcctgaaggttttagtggattgtcgtcaagcatgaaatatctatttcttgataatttgtgtggtgcattaaagcagcacgcattccttacctaaatgcctttttgttgacacaaaagcatccctgattgcaatacgtgaatagccatagcctttttacaacaaaggcactaattatctaattctaatagagtattgtccaactggggcataaagatttaactaagtaataagaatgcttgtgatatgtttttctagcagtctttttttttctttccttttattttctaggaaaaacaggagcataatatgaagcaaaagcattgatccttgtgttaacagctactattaataatagctaatgacaaacaccttaatgcgaggtgcatcttgcctgacgtgttggatgaggatgacgccataagttgctgcttaaaagaacctccatcgtcaattctacccgcatttacttgacatcagcggacagcttgaaattaattaggagtctgattaaaagttaaactactgaagagtttgacaaaatatgctcttaaaattcaccatcttgggggtccttatagaattctgtacctgccaacactcaaggttttaaaagttaaaaagtaaaaatatgtcaaacatggattctcatatcggtaccgtgtgaaacagcccatcgtaattgatggccacgtaattgtgatatgcgcataacgctatcatctgtttgagcactcatggtactatcatatatttgatacacatatctaacttgtctctctcttgtagtcagcttgctgtttagaatattttgattagcattcctttccttgttttattagacaaaagttattaatacaccgtctgatcttcctttgtacttttgttccacagtgctagccaataagaaaattttctgccgcatccatgatacttagagactccactgcttcattgaccaagaaaatatagaagatcaaaggtgtcttgtaggtaggaagcttctgccggttgtttatatattcatcgtttcacctgataattttttttccatgtttgttgggttccgagtgtttttctgcacttgtgtattattctatgctctgataatgattaatagtcatctctcctttcaaaattattttatccatgacacaatttgtttgcttgctgaaatccttttatttttcacttccttaaaggcaaggaagatctaatttaagcgtttcggaaaacattattttaaaaaccattgagacacatgattaatgatcacttcataaatttgtcttattttcagaacttaggtgttaaaaggaatagagtaatctagggaggaataaagcatgggaaaaggagaggtagccactaggtccaaatctcaaaaatcatcggcgacacaggtatgtacaacaatctgaaactacaagactaattactaattagtgaaattctcttaccttgttttgcttgttttagaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttcaggttcataaaatgagttcatcttgcatccatttaactttttccactatattgtttactgtactggttagtatcaatctgtaggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaaatgtggctccaagtcctcaggggcacccatatatgtggggtccacaggtacattcacattaatttcttgctatagatgcagtgttctggtcataccactaccatttctgctgttttatcagaattatgtctagataagtctaagcatgagtgataataagcaaatggtagcatggacctttccgctgcattcatttgagttacccagtccttttaacctttggccttagggttttggtagtttttcttttgtatgaaggatgctgttagctactctgaagctatggaaaatcagttttaacatgtgatgtgaattgctcgtgtcagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggacaccatatcagcaggcacctatgctaccggtactcactcttacattttacttaatgaaatagtttttgtcatgttatgtgaatagctcttaccaaagaatttcattctaattgtctctataccagggttcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcctgtaagttcttgggcatcttttatctgctctgtagttgtagaaggcaagaagaatttcatctaatcttttttttttgcttccctgggtcttttagttgtgtccgtttattccagtttcagtgatcttgctgtcaaaattgttgcttatgctatcataatttagctacattttcatgtaaaaattaattggtttgatttgcacctttatttcattacctgtctacttagattagatatgattgtggttgaaaatcatgttgttagacatctgctggcggaacagagacagataagtcaggcaaaagtaagcggaagactcccctgaagagatcgaaaggaagcttaggtaatcttgatgtagttgcaacaaaaaataaaaaggcgcccgcaaaaccttcagcatcctcatccaatgaaggttcttcacacaggtagctccttttcttctgtctctgtgattataatggataaacgctgacttttttttaacatatgatatgcagtgagagcggaagtggaagttcttctgaaggaagcagtacaaattcaaaaagtgtatgtcactctatcataccgctttgttatgttacttcagttacttcatttttctcaccagtacaaattccaaaggcagcatgccttttgttttaccactctggcatcccccccccctactgaaggtcttgtttgtcatgcgcaatatctagagtctaagcctttgtattattgcttacggcacctgtactgaactggtacactatttagaggtgcaagttagttgggtactagggttgcacactggctctgcatattggccatcagaaacccacctagactagttgggttgtacttctcttcaaggttctggatgtttgcaaaataaagatctgcaaagtgcaaatcttgtaataagaggatcccaactgataatgaaacagtctgatttttggtgatactaaaaaaaaatcgaatggtgagcccttctattaaagttcttgaccattcgcatagtcgttagttattagactcgagttgattattctttgctctcgccacatgtgttgtaccctttaataattagtgttgatcgattgttctgaaacccttaggaacttgttttccccaccaaatacttatagtatgtggatcttttttttttttgaaagaatggatcttttttttttgttgcatgcatgtttggtacctttttgtgctgggtgtatccatggttgccactactttcaaaatgcactatagccttctagcctgtgaacaaagtatatggatgcactcaatcctctatgtttttttttttttcctttttgctccttttgcttcatacgatcattttcttgctaacctaagacaaatatgtacaaacaatttgcttgcagggttcaaggacaaaggatggttctgagcatggccagggtaatggtaggattaagaacctctcttttttttatataaaacagtagaattttcaaggaaaatctgtagctcataaaagattctgcaaaaactcatgaatattatagtggtgcaggaggcatgcctgaaaaacattttccgtgttgaaaacacatatggcaaaaatcactgtttagacacaaggtttttaagaaagcaagggcgaggaagtaccatatgcaatcatcatccgttggcatattgggtgtgggtttagatttggattcaaagtggcatatttggtacaagcaaaattttgatgacatattaggaaccgacgaaatttccagtggtatattaggggtttactcctagtatagtactgaacatattctacaacctgccattggtagctttattgaagaataaaattgtgaaactatgcttgtttttgttataagcaattaataaatatattagttaagacaataagaaatttttctcatgtagtaaggattgactgcaatctaattacctttttgtccagatgctagcaacaaaggagctactgctcagagttctgcggttgagcccgtacaagcatctactgggccagttgtgcttaaccctatgatgccatactggcctgtccctcctcccatggctggcccagcaactggtgtaaacatgggaatggattactggggtactcctacttcagtacccatgcataataaagttattgcagcaccagcatcagctccttcatcaaactctcgtgatgttgttctcagtgatccagccatacaggtttattgctgtgcaggatttgtttcttgtttttgctgtgttacaggaaccaaccttgcaatttccttagggctgtattttatttttaatgcaggatgagcgagaactgaagagacaaaagcggaagcaatcaaatagggaatcagctcgacgttcaagattacgcaagcaggtctgtagtttctgcaccagtctgcatggatttggctgtcgtttgctgttcttattatctttgggtagtctgtgtttctgtaaacaactaatccataagaggccaacttggattcaacctaatcagcagtgaattttgataaggttgaacctatttgaattgaccgcagacgggaataatacttaaatatacatagcctgtatggcatgcatgcgcgcatgcacgctatgctagagcccaggatattgatggtgctttaaatgaattttcttttatggatggtttgaccagaatctgaactgaacaatatgtttgaagatattagcttggcagtccattggatcataattcaaagctgattttgaattgtagaggattttcattactcattacccagctctcttttcatgattgctaaagacaagtaaaaaattacccaaattattcttaaaacatcaaactttgaaattcaaactgcttaggattacaacccaattgttgttgaaccagtaccttattagtcgagtgagtataatttaccgcacttcaatgacaatccagtgagtcgcaaaattggcaactacatttttgactggtgtagagagatgttttctaacttcttgagatacatctttaaaatacacactatatttgttttaaaagtcatggatatataagcaagcatgggaaacaacctcccaatacaatattaggttgactgcagatattcttgatcaattctcttttggtgatataagggtggattggttctttttcttcttttttttttttggttctcggcttctcgcatacatatcattgtccatttgttaacttaagaatgtatggttcgtcttagggttctcagcttgttgtatcactagtatactccctccgttttcctatatgatgttgtttcgttcatttttgaactaaccaacagcatataaaaaaaaatggggggagtattttttttgaggagtccattactagtgtactattttatcaaccgtatctccttttactgctatgggtagtcaaactgttgcaggtgctggttacacctagttattccaatgctggatgtatatgaccagggttaaataagcaatgcaatgttatttttgcggtatttttttttataaatttactattaaccttccttttgatgatatatatgttgtaacaaatgaaatactacaggctgaatgggaggaagtagccaatcgagctgatttgctaaagcaggaaaacagctcacttaaggaagaattgaaacaacttcaggagaagtgcaatagcttgacctcagaaaatacaactttacatgtaagatttgtgttcttctgttgtcctacacttcccataatgtgcagtagacaatagttactatttttagtttgctgcaaataagaaagtggatcaagggcaaaacatactaggggattacccaatcctcacaggctgttacttccaacgcattggttcactgataactacccctgaagtcctgaacccatcttcttttagacgtttggagttaacatttcattctttactttgaaatttatttgaggcatttttaatgattgtaggaaaagcttaaagagcttgaaggcgagaaatcaaatggaaactggtataaagagtgaaaagctgtaacttatcactttctgacttctgatgtaaggaataattacttggagctaccattgctattacagagtacatattcttaaaattttgttgtaactttcttgaattttcagataaattggaggcgacatggtaggtccgataattaggaggtattcatgtatgctattagatttttggccgagaggtagaattgtatcataggatttgacatgatggctacagattcttcttccagttgccgcggctgctgtactctatgcttttttttttctgcacttgtgtaagattctacgaagtaccatgtaaaagtccccaagtgatgtttgaaactctgggggttagcttctgagatagttgatgtagagctgctcattgagcgtctttacctgaattgatgtgtgtcacagttatagtttgtgacttatcattcagataattagaggcacaaatttgtataatgtactaacgggtcgtgataaggaaattttgttgcattttgct</dnaseqindica> |
| External Link(s) |
