Difference between revisions of "Os03g0241200"

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(Created page with "{{JaponicaGene| GeneName = Os03g0241200| Description = Similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa p...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0241200|
 
GeneName = Os03g0241200|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0241200

Description

Similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) ([U4/U6.U5] tri-snRNP 15.5 kDa protein) (OTK27)

Version

NM_001056049.2 GI:297600625 GeneID:4332209

Length

1949 bp

Definition

Oryza sativa Japonica Group Os03g0241200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:7525613..7527561

Sequence Coding Region

7525728..7525730,7525850..7525970,7526061..7526164,7526949..7527080,7527178..7527204

Expression

GEO Profiles:Os03g0241200

Genome Context

<gbrowseImage1> name=NC_008396:7525613..7527561 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:7525613..7527561 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagccaggaggtcgtgaaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtccagcaggcctccaattacaagcagctcaagaagggggccaacgaagcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacggagccgctcgagatccttctccacctccccctgctcgcggaggataagaacgttccatatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtcattgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctcaaggatgctatcgagaagctcctcatttga</cdnaseq>

Protein Sequence

<aaseq>MSQEVVNPKAYPLADAQLTMTILDLVQQASNYKQLKKGANEATK TLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIAC SVTSNEGSQLKTPIQNLKDAIEKLLI</aaseq>

Gene Sequence

<dnaseqindica>116..118#238..358#449..552#1337..1468#1566..1592#agacacgaaagccctagcgacacgcgagctcccccaatcctccgccgcggcggccgcctcctcctcctcctcctcgcgcgagctcctccaagccgagccaacccacctcgcgaaaatggtaagcgacgcctctctcctcgcccccgattcctccctccctcgcttgctctcgccgacgctgctcgattcgagcctgaccgcccgcctgttcgttcgctcgttctggttgctgtgcagagccaggaggtcgtgaaccctaaggcctacccgctggcggacgcgcagctgacgatgaccatcctcgacctcgtccagcaggcctccaattacaagcagctcaagaagggggccaacgaaggtttaatccccagacaaaaattgtccctcttgttttttttttgtttggctccagcggtttgattttctttttgggtgtgcctatgcgcagcgacgaagaccctgaacaggggtatatcagagttcgtggtgatggcggccgacacggagccgctcgagatccttctccacctccccctgctcgcggaggataaggtagtatttttttccttaacttttttttgtccttgctatgtatatcatctctgcttcctatagttagcgttcttattaaaattttgtaccttaagacttggtatctggagtaatcgagttgtttgactagttgttatttgctagagctgtcaagctttgttcgtgtggtattgtggactatcgatattggtccaccgtcatgttttctggactgtttcattgatagaattaagtgtttgattgtgctcttagtgttaaccaccctcttctggtggttcgtgctacaaattccaatatttgctcattagcagaatacatcttggatgatgttttgagtccttggctgctagtgaccttgctttgcacactgaattgtttttgtggtctttattcttgttggacacaagtgatatactgcttgttatttggtcatgaacacagataactcccaactgttctttttggtcatgaacacaaataaactgctccaactcttcttttttgattggctccgtttcttcttgctgcccgaaacattacaattatgaattcattgattgttgtagactgatagattctagtactcatattttactgtttttcaatgttatgcttaattgtgcagtgagtagtgaacaaatgccacaacattttttttcagtctgtgatatagctgtcatcttctgcatatttctcctcttgaccatgcttttctcatttatttttgttgtcctgaaatggagaggaaaaaataactcacttgttttttttttaattttgacagaacgttccatatgtttttgtcccttcgaagcaagcccttggccgcgcatgtggcgttactagacctgtcattgcttgttcagtgaccagcaacgagggcagtcagctgaagacaccgatacagaatctcaaggtaaccatacctttggatcatctagtactttgctggaaaactgtgagactgttatctctattttagcagtttaactgaatttcgtcataaatttcaggatgctatcgagaagctcctcatttgatttaccaagacctttcagtgtgatgggcctcagagcgacacagtttttcagaggcttggactggtgatggtgtcttatttgctagaattttgtgtttttcaactatgtctgcgagaacattaaacctatacatgcgatgtgccatgtgtcctatctttgtgactgttgtgtaatccttaagatacatctgtagcatggcagttcagttttctccctagtcactccaagcactattgtaatgactaatgatttatggatgtttgcttgtgacacacttgcgaaaaattggtcttatcatcagctggagttcatgggcaggtgtcctttggaatggatgaattttgcagattttgtggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0241200, RefSeq:Os03g0241200