Difference between revisions of "Os03g0255500"

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(Created page with "{{JaponicaGene| GeneName = Os03g0255500| Description = Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment)| Version = NM_001056130.1 GI:115451988 GeneID...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0255500|
 
GeneName = Os03g0255500|

Revision as of 19:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0255500

Description

Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment)

Version

NM_001056130.1 GI:115451988 GeneID:4332293

Length

5230 bp

Definition

Oryza sativa Japonica Group Os03g0255500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8269561..8274790

Sequence Coding Region

8269849..8269992,8270096..8270264,8270349..8270518,8270630..8270808,8270907..8270972
,8271064..8271237,8271486..8271784,8272029..8272129,8272221..8272305
,8272420..8272573,8272674..8272879,8274296..8274540

Expression

GEO Profiles:Os03g0255500

Genome Context

<gbrowseImage1> name=NC_008396:8269561..8274790 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8269561..8274790 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcacgccgaacgggctggcgcggatcgagacgcacggggcgaagacgaagaagcacgagaacgggatatgccacgacgacagctcggcgccggtgcgggcgcagaccatcgacgagctccactcgctgcagcggaagcggtcggcgcccaccacgcccatcaaggacggcgcctcctcgcccttcgccgccgccctctccgaggaggagcgccagcgccagcagctccagtccatcagcgcgtcgttggcgtcgctgacgcgtgagaccgggccgaaggtcgtcaggggagatccggcgaggaagggcgaggccgcggcgaagggcgcgccgtcgccgcacccgcagccggtgcaccaccaccacccgcacgtcaccccgaccatcgccgtcagcgacagctccctcaagttcacccatgtgctctacaacctctcgcctgctgagctgtacgagcaggcgatcaagtacgagaaggggtcgttcatcacgtccaccggcgcgctggcgacgctgtccggcgccaagaccggccggtcgccgagggacaagcgcatcgtcaaggatgaggcctccgcgcaggagctttggtggggcaagggttcgcccaacatcgagatggacgagcacactttcctcaccaacagggagagggccgtcgactacctcaactcccttgacaaggtgtttgtgaacgaccagttcctgaactgggacacggagaaccggatcaaagtccgtatcatctcggccagggcgtaccactcgctcttcatgcacaacatgtgcatccggccgacggaggaggagctggaggagttcggcacgccggacttcaccatatacaacgccgggcagttcccctgcaaccggtacacgcactacatgacgtcgtcgacgagcgtagacatcaacctcgctaggagggagatggtgatcctcggcacgcagtacgccggggagatgaagaaggggctcttcggggtgatgcactacctcatgcccaggaggggcatcctctccctgcactccggctgcaacatgggcaagcagggcgacgtcgccctcttctttggactgtcaggtactggaaagactactctgtcaactgaccacaacaggctgctgatcggcgacgatgagcactgctggagtgacactggcgtgtccaacatcgagggtggttgctatgccaagtgcatagacttgtcacaggagaaagagcctgatatttggaatgccatcaagtttgggaccgtgttggagaatgtcgtctttgatgagcacacccgtgaagttgattacaccgacaaatctgtcaccgagaacacgcgcgctgcttaccctatcgagtacatccccaacgccaagataccgtgcgtcgggccacacccgaagaacgtcattctcctggcatgcgacgctttcggcgtcctccctcctgtcagcaagctaaaccttccacagaccatgtaccacttcatcagtggctacactgctctggttgccggcacggaggatggcatcaaggagccgcaggctacgttctctgcttgcttcggtgcagcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgagaagatgcagaagtatggcgccaccgggtggctcgtcaacaccggttggtccggtggaaggtacggagttggcaagcggatcaggctgccgtataccaggaagatcatcgacgccatccactccggtgagctcctcaccgccaactacaagaagacggaggtgtttggcctggagatccccactgaaatcgacggcatcccgtctgaaatcctcgacccgatcaacacctggacggacaagggcgcgtacaaggagacgctcctgaagctggctggcctgttcaagaagaacttcgaggtgttcgccaactacaagatcgggggagacagcagcctgacagacaagatcctcgctgctggaccaaacttttga</cdnaseq>

Protein Sequence

<aaseq>MASTPNGLARIETHGAKTKKHENGICHDDSSAPVRAQTIDELHS LQRKRSAPTTPIKDGASSPFAAALSEEERQRQQLQSISASLASLTRETGPKVVRGDPA RKGEAAAKGAPSPHPQPVHHHHPHVTPTIAVSDSSLKFTHVLYNLSPAELYEQAIKYE KGSFITSTGALATLSGAKTGRSPRDKRIVKDEASAQELWWGKGSPNIEMDEHTFLTNR ERAVDYLNSLDKVFVNDQFLNWDTENRIKVRIISARAYHSLFMHNMCIRPTEEELEEF GTPDFTIYNAGQFPCNRYTHYMTSSTSVDINLARREMVILGTQYAGEMKKGLFGVMHY LMPRRGILSLHSGCNMGKQGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDTGVS NIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLENVVFDEHTREVDYTDKSVTENTRAAY PIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLPQTMYHFISGYTALVAGTE DGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKR IRLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEIDGIPSEILDPINTWTDKGAYK ETLLKLAGLFKKNFEVFANYKIGGDSSLTDKILAAGPNF</aaseq>

Gene Sequence

<dnaseqindica>4799..4942#4527..4695#4273..4442#3983..4161#3819..3884#3554..3727#3007..3305#2662..2762#2486..2570#2218..2371#1912..2117#251..495#gccccacacctctccactcctgtcctgtcatcttgtacactatcgcgttgctgatctcctcctcgactgcctcgtacgtgttcatcatctcttttaatttctccgtggtttttgcaccggcatttggatgctgcaagcatcaatggcagaaccgggtcgtaaatcgtaactagcgctgttatgttggcgttgctaattaacgtgactgtttacttttttttttgaaggtttcgcgcgaccggagacggccatggcgagcacgccgaacgggctggcgcggatcgagacgcacggggcgaagacgaagaagcacgagaacgggatatgccacgacgacagctcggcgccggtgcgggcgcagaccatcgacgagctccactcgctgcagcggaagcggtcggcgcccaccacgcccatcaaggacggcgcctcctcgcccttcgccgccgccctctccgaggaggagcgccagcgccagcagctccagtccatcaggtgactcctcggctctctctctctctctctctttttttttgagaacgctcgtataataataggctttgccttttgcttcctaacgagcaatctgaattggaaatggccactggccaatgcatttgttaagaaaactaacaagggaatgacaaatgaaaatgggaaattttagccgggagaaatggaaatggaaaatgaagaggaggaatcgaacaatccccttttagataggacgaaagtaaaaaaaaataaaatgacgttgttgctggataattttactcccacatggaagagaacgaaaggatggaccatggtaatggtagttgtgcacctgttctgccacgtggacattggaggacgggcgtgtcaaccatatccagcaacctaaattcgtaacagacacgtagagttcagagcgtaaatgaaacgaataaagataaaccaaaagtaactcacggggccaaaccaagtaatgtgtttctaaaaaaaaaaagaagtaatgttgggactaggattaccgtgggttaatcggctaatacgcacaaaaagttggacaaaaaaaaaagtaggtccggattacaatcccaggtcgttttccagcagaaaggacaatcatcacaagatgtccgcaccgtgccatgcacgcccgctgcccgcaggccgcagcctttcacgtgacatcccccgtgcaccgcaccgcaccgcatcacaaaattgcccagaacatccacccgcttgcacgcaccgcacaagttcgcattccccctcgcatcgcaccgaatccacgcaaacccccaaaaatcccaatacgatttcgcagtcatgctggggagcgagcgaagaaccttggcgtgacagaattcgattgggcggtagagacaacagaggcgttgattttagctgtatttttgggagagcaatacatgcttccgtcatgcacgctgccgtttgtgtcgatcggcaacgtcgacggtatcgcgatagggcttgttgggggatacgatacgacacgcaccagccgccgatgcggtgtctcagacgtaacgaacgcgagcgcaatttggggcggcaacttgcgccgcggggatacccgataatctcctcatcagcctgacgcggcggcgtcggtagctgttgccgtcgcgtaacttgcgcctgaatttcccccaagaaattagaggaaacctcgtatcgttctacacaagccgctcgacacagtattctattcggactaactagacacaatgagttcattgagacatggtcttacttttatttaggagtaagtttagcagtggtagcaagcaactgagcaagtgctgattttctttggatgttcttattattattattttgacctgataaagtggtaattaactgatggaacgatccctgtcacgatgacgtctgatgcagcgcgtcgttggcgtcgctgacgcgtgagaccgggccgaaggtcgtcaggggagatccggcgaggaagggcgaggccgcggcgaagggcgcgccgtcgccgcacccgcagccggtgcaccaccaccacccgcacgtcaccccgaccatcgccgtcagcgacagctccctcaagttcacccatgtgctctacaacctctcgcctgctggtacgcgacgcgacgccagaacggctgtaatttttgttcagggattataactcgtgacatgtgtaagtgacgtgttttctggtgggatgtgggcgagcagagctgtacgagcaggcgatcaagtacgagaaggggtcgttcatcacgtccaccggcgcgctggcgacgctgtccggcgccaagaccggccggtcgccgagggacaagcgcatcgtcaaggatgaggcctccgcgcaggagctttggtggggcaagtgagttcaccgcctactctacttgtgcatgtcaaagctctgtttctgcaggctctgcttgctgatttgcagctgactgatcactctgttttgcctgtgtctctcctactgcaggggttcgcccaacatcgagatggacgagcacactttcctcaccaacagggagagggccgtcgactacctcaactcccttgacaaggtgatatacgactctcaagttcagtgaccgtgtcagtaatttttacatcagcagttgataacaaactatattttgttctgtatttctgtaggtgtttgtgaacgaccagttcctgaactgggacacggagaaccggatcaaagtccgtatcatctcggccagggcgtaccactcgctcttcatgcacaacatgtaagtgaagccgtcactttgcactatctttaggtcgctcgttcgtgtcgccaccagataagttcaccttgacgtatactgctccatgattatgagatatatgtgactatatgttgtgtgtgtgtgctggaatcctattgcatgcctaccaagacatgggggatcatctcacatcagcggcgtactaagtagtagaattgcagtagtaaccggaatggatatgtgggggaaatgggcttggcaggtgcatccggccgacggaggaggagctggaggagttcggcacgccggacttcaccatatacaacgccgggcagttcccctgcaaccggtacacgcactacatgacgtcgtcgacgagcgtagacatcaacctcgctaggagggagatggtgatcctcggcacgcagtacgccggggagatgaagaaggggctcttcggggtgatgcactacctcatgcccaggaggggcatcctctccctgcactccggctgcaacatgggcaagcagggcgacgtcgccctcttctttggactgtcaggtaataagatggctctccacggtggatgaaatgaaaaaacacccgtggtgccgtcacctgctcagtctcatctgacgcgttccccttgatcaccatatatataataactgaatacatcatatctgtttgagatctttgttgctgtgtgcatgatgcctgtttcactgaagaatttgtgttgttagtgcccttgttgtttactgtcatctttttggctgattttgtgtatgtgttattttaatcggcaggtactggaaagactactctgtcaactgaccacaacaggctgctgatcggcgacgatgagcactgctggagtgacactggcgtgtccaacatcgagggtggttgctatgccaagtgcatagacttgtcacaggagaaagagcctgatatttggaatgccatcaagtttgggaccggtagttgcctgaaccttcagtttaatttagtcgatcattctagtttctcccgcttgccatttcattgatcgaaaatgtttggcgtctgcagtgttggagaatgtcgtctttgatgagcacacccgtgaagttgattacaccgacaaatctgtcaccggtaagttatctccaaagcgcaatccggtttcagtcagtcacaaaagttacagcaaaaaacaaaaaatggaaatctcacaactctgaacttttctgcagagaacacgcgcgctgcttaccctatcgagtacatccccaacgccaagataccgtgcgtcgggccacacccgaagaacgtcattctcctggcatgcgacgctttcggcgtcctccctcctgtcagcaagctaaaccttccacagaccatgtaccacttcatcagtggctacactgctctggtaaacaatttttgttcagaagcagagtcacctgccttaccttcctatcaccttgatgatcaacaaaggaatttagcctgaatcttcgttattgcattgccatttcaacaggttgccggcacggaggatggcatcaaggagccgcaggctacgttctctgcttgcttcggtgcagcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgagaagatgcagaagtatggcgccaccgggtggctcgtcaacaccggttggtccggtggaaggtatctgctactgtccactgtaacagcgtccacaccattgcacatttacctgtggcatgaactaactctgaattcactgttcaggtacggagttggcaagcggatcaggctgccgtataccaggaagatcatcgacgccatccactccggtgagctcctcaccgccaactacaagaagacggaggtgtttggcctggagatccccactgaaatcgacggcatcccgtctgaaatcctcgacccgatcaacaccgtaagctccgtagcatcacgcatcagttcatgccatttctgctatacatgtaaaaaatgcagagtctgagttgttcttcgtcggaaatgtggcctctgtgcagtggacggacaagggcgcgtacaaggagacgctcctgaagctggctggcctgttcaagaagaacttcgaggtgttcgccaactacaagatcgggggagacagcagcctgacagacaagatcctcgctgctggaccaaacttttgagttactgaagaataaaaaatatgcagataaagaacgcgatgaagctagtcagttggttacaataaagaagtgggtctatgcgtgtttgccaatgatgatgacgaaaatgttggatcgatgtgcagctaccggtagagtttagctagcttcctataagtttcatgcgtgtctgttaggttctgtcagtttgtctagcttgacggtgtgtatgcagtatgctccattcccccttcccctgtacacatctctattttctgaattggaatttgaaagcatcttgatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0255500, RefSeq:Os03g0255500