Difference between revisions of "Os03g0263500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0263500| Description = Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66)| Version = NM_001056169...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0263500|
 
GeneName = Os03g0263500|

Revision as of 19:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0263500

Description

Similar to Splicing factor 3A subunit 2 (Spliceosome associated protein 62) (SAP 62) (SF3a66)

Version

NM_001056169.1 GI:115452066 GeneID:4332334

Length

2790 bp

Definition

Oryza sativa Japonica Group Os03g0263500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8710895..8713684

Sequence Coding Region

8711098..8711448,8711549..8711623,8711704..8711778,8711887..8711952,8712446..8712522
,8713214..8713383,8713474..8713625

Expression

GEO Profiles:Os03g0263500

Genome Context

<gbrowseImage1> name=NC_008396:8710895..8713684 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8710895..8713684 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccagaatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctcgccaaggacccctacttcatgcgcaaccacctcggcagctacgagtgcaagctgtgcctgacgctgcacaacaacgaggggaactacctggctcacacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagcccaacaagagaaagttcgcgccccgcaagtccgttaagattggaagacctgggtatcaggtgactaagcagtatgatcctgacatgaagcaacactcatttctttttgagattggttatcctgaaattgaagaaaacagcaagccaaggcaccgtttcatggcatcatatgaacagaaagtcgaatcttgggataaaaagtatcaatatctactttttgcagcagagccctatgaaattattggctttaagataccaagcgcagagatcgacaagtcagcagataaattcttcaactattgggatccagacaagaaacagtacattctccaactatacttcaaaacaagacaaccagaagctaataagccgcctgcggctcctgggactttgccaaatggatctggaggtccaccacgcccacccccaccgcaggttccgccacccccgccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatcccacccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacctccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctggagcacctcctcgtcctccaatgcaaggatttcctgggccgcagcagtag</cdnaseq>

Protein Sequence

<aaseq>MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYF MRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKF APRKSVKIGRPGYQVTKQYDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESW DKKYQYLLFAAEPYEIIGFKIPSAEIDKSADKFFNYWDPDKKQYILQLYFKTRQPEAN KPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPP PPPPPLANGPPRSIPPPPMTGGAMANFTPGAPPRPPMQGFPGPQQ</aaseq>

Gene Sequence

<dnaseqindica>2237..2587#2062..2136#1907..1981#1733..1798#1163..1239#302..471#60..211#atacgagcaggacagcacaggtcgagactcgagaggcggcgagaccgagcggggacgccatggatcgcgagtggggctccaagcccggcagcggcggcgccgcctccgcccagaatgaggccatcgaccggcgggagcgcctccgccgcctcgccctcgagaccatcgacctcgccaaggacccctacttcatgcgcaaccacctcggcaggtactgcctcccacccgctaaaaccctagctttcttcttcctcgattcggtttgctccctcgcgctaatcccgctcgatttcgtgtccagctacgagtgcaagctgtgcctgacgctgcacaacaacgaggggaactacctggctcacacgcaggggaagcggcaccagaccaacctcgccaagcgtgccgcccgcgaggccaaggacgcgcccgcgcagccccagcccaacaagagaaagttcgcgccccgcaagtccggtgagtaaaacatctcttctcgtctccttcccccaggattaacgtcctttggttataatgtgaatattagcactaaactgttgtgcattctggctttgtttggttctaccaagtatggctaaatcatattggtttgctctcagttgaaaaaaagatccaaaattatgtatgtagttggtagttagtgtctagcggcaaatttgtgtgggtgaattctgctaaatataatgaaaattgttcataaatgattgaatgatagaatcttttcttcaaatcaatctaccgatggaaggtcaaacagctaattaccaaattcagacgaggagatgacagtatgacaccttgaaaaagccttgaaaaatgaaaactcaccgtggacattcggttatgctaatcaattggagcctaagcatgaatatttggattagttctgaaaacttcatggagtatagcaatttctagtccagaatggtgttttactatacttaaagtttataggagctcataatttggcttaaaactgagtatggctcaattctcaaagatgaccagtttcttatctgaaccctttcatgttgtctgtatctttggggatagttatgctatctttaagtccagctatctggacatggtcgaatctgttggaagaatctaacacaaaatattttaattatctttccttccttttcagttaagattggaagacctgggtatcaggtgactaagcagtatgatcctgacatgaagcaacactcatttctttttgaggtcagtgttcattgcgtttacatttgtttggcacttgaatttaattcatacatgtttttacatgttaatattgtgaagtccagaacaaattagttcactttccaatactccatatatatagagataattttgtttatttttcttttcatgtcatgtaatgtagggcatcaaagttacatacttatggaaatgatctttttgtgactccagttaagttagctcctttttttttctccatatttaagttcattgcacagtttctatagtttcccttacatccacatttgcaaactagttttataatattgttacctggagtttcatcttttgatgaggggacttttgaggactatcacattcaaaatggtgatggataaatgagttcaccgacaaattttgaggatattttgtttttaaaatttatccttataacattagaacatgtatataattttgtacgctggggtgataacttttgatatttctcttttagattggttatcctgaaattgaagaaaacagcaagccaaggcaccgtttcatggcatcatatgaacaggtaaagcaatcaacctgcctgattgttcggttttcagtttgtggtatgttgctttgtttgttactcccatgtatcaacagtaacctaacagactgatgttttgtacagaaagtcgaatcttgggataaaaagtatcaatatctactttttgcagcagagccctatgaaattattggctttaaggtgtgtgttttgaatgttttgctgctaggatttcagatcaactggccattgtattttgctaacaatttttgctgttgcagataccaagcgcagagatcgacaagtcagcagataaattcttcaactattgggatccagacaagaaacagtacattgtgagtacaatatagtttttcattgttcataatttaggctatttagcctgccttcatagcaatcttggttctcaacttatcttcgtgttgtttgcaacagctccaactatacttcaaaacaagacaaccagaagctaataagccgcctgcggctcctgggactttgccaaatggatctggaggtccaccacgcccacccccaccgcaggttccgccacccccgccacaggctccgccgccgcctccaccaaatgcacctatgggtatgcccccaaggatcccacccccacctgttggtggtactcaacctccaccaccaccgcccccacttgcaaatggacctccacgatcaatcccacccccacctatgaccggtggtgcaatggctaacttcactcctggagcacctcctcgtcctccaatgcaaggatttcctgggccgcagcagtagatgacccaagcgacaacaactgaggtcgggctacaaatgttgcaatgattgcctagtttgctgtagaatgccttttgacccaaatttgtatgttgtcaaatacattatatatttacatgtactcttagactatagtattgtcgattttaagaaattttccaccttgatacttttgatacttctattcaaagcacttggtgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0263500, RefSeq:Os03g0263500