Difference between revisions of "Os03g0286500"

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(Created page with "{{JaponicaGene| GeneName = Os03g0286500| Description = Similar to RNA-binding region containing protein 1 (HSRNASEB) (ssDNA binding protein SEB4) (CLL-associated antigen KW-...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0286500|
 
GeneName = Os03g0286500|

Revision as of 19:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0286500

Description

Similar to RNA-binding region containing protein 1 (HSRNASEB) (ssDNA binding protein SEB4) (CLL-associated antigen KW-5). Splice isoform 2

Version

NM_001056309.1 GI:115452346 GeneID:4332479

Length

2688 bp

Definition

Oryza sativa Japonica Group Os03g0286500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9928769..9931456

Sequence Coding Region

9929071..9929096,9929499..9929757,9929883..9929922,9930509..9930674,9930785..9930992
,9931080..9931313

Expression

GEO Profiles:Os03g0286500

Genome Context

<gbrowseImage1> name=NC_008396:9928769..9931456 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9928769..9931456 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatgatgggcgggcagccgcagcagacaccgccgccgccgcaggtggtgcaggtgcagcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggattcgtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatcaacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccgccgcacctcctccgcccctcgccgccggcaaccccggggccgcacgcccccgcgcttccctcccctcaccaccaccagcccgcgccagccatcgcggtggggtccaggggcgtgtcgccggtgccgtggtactaccacccctccacgacgccgcctccgccgccgccgccggccgcgcactacgccgcccatggcggccaccaccagcaataccacggcgttctccccttctaccccgccgccaccacctacgggtactccccgaactacgtcgctgacctgagctacaacgcgaagctaggccaggcggcagcggcgcatggcacgaacggggcctacctgcaggggcacttctcgtacccggcggcggcgcagggaggcatgctcgcggcgaacgggatgatgcccgtgtacccgtactaccagtaccactaccatggcgcgcagggcctgggcgtccccgccgcccacttcttcccgccggtctcggccgcagccgtcaccaccgtgcccgccatcatctccaagcccaccgtcatggcccctcccaaagtggagcaggtgacgggatgcagttga</cdnaseq>

Protein Sequence

<aaseq>MTMMGGQPQQTPPPPQVVQVQQPAAAFGDTTLTKVFVGGLAWET HKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACEDATPVINGRR ANCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP WYYHPSTTPPPPPPPAAHYAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKL GQAAAAHGTNGAYLQGHFSYPAAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHF FPPVSAAAVTTVPAIISKPTVMAPPKVEQVTGCS</aaseq>

Gene Sequence

<dnaseqindica>2361..2386#1700..1958#1535..1574#783..948#465..672#144..377#tcgctctcgctcgcctcccccttcgcatatcaccgcgcacgaacgcacgtcgcagctagcgggtcgtctcagctcggcgtggtgtcgttgaggtggtcggtagctaggtagctaggcgcgcgcggccccggccacgaagagagatgacgatgatgggcgggcagccgcagcagacaccgccgccgccgcaggtggtgcaggtgcagcagccggcggcggcgttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaaggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgtcatcatctccgacaagctcaccggccgctccaagggctacggattcgtcagttccaccactccacgctctcattctcgctttcgtgtcgcgacgtgcgcgaggttcggttttcttacggtggtgtggctgcaggtgacgttcaaggaggcggacgcggccaagaaggcgtgcgaggacgccacaccggtcatcaacggccgccgcgccaactgcaacctcgcgtccctcggcgccaagccgcgcgcccagccgccgcacctcctccgcccctcgccgccggcaaccccggggccgcacgcccccgcgcttccctcccctcaccaccaccagcccgcgccaggtacgcacccggtgcagtttttaaccaacgctagttacagctgtttgttaattaacgtgcgtcgtccacggtcgtactgacgagtgagatcacatgcctttggcgagcagccatcgcggtggggtccaggggcgtgtcgccggtgccgtggtactaccacccctccacgacgccgcctccgccgccgccgccggccgcgcactacgccgcccatggcggccaccaccagcaataccacggcgttctccccttctaccccgccgccaccacctacgggtacgtgctctcctccccttctaccgtactacaattctactcgatctcttcgcgcgcacaacgtttcgaacccaaacggctccaaaaaaagaagaaaaaaaaacggacgagaattttgcgccgccatggcgcgacgtttcggaggggcggcgcgcgtgaattctctcttctcgctagctagtatctccgcgctcgcgcgcgtacgaggatccgtgtccggtgcgcgcccggacggggcggagggggggaccggtgcatggggtggggcacatgcgaggcagtggctggctaggggggcacgcgacgcgacaaggagcgcgcaggcacaggctggacatggaccggaccagctgcctcgtcgtgctctcacgtgcccacgtgccggcctgcacgggatgcagggaaagaacgcagaagaacaggggagggcaaaaaaagaaaaaattaacggctgcgcacgcagttaaagcagcgcccatagttgtcaattgattacgcgatctgacttttaggtgccctattattataaccaagtgttacaccagcgataattcgttgcactgattgattggtttggctcgatcaggtactccccgaactacgtcgctgacctgagctacaacgcggtaagccttcttgatctacccaattctcctctccctgatgcaccaaaacgtcctaaatgttgccttgcagccatgtacggtttcatatgaactgagaataattttgctttgtgacgcgggagcagaagctaggccaggcggcagcggcgcatggcacgaacggggcctacctgcaggggcacttctcgtacccggcggcggcgcagggaggcatgctcgcggcgaacgggatgatgcccgtgtacccgtactaccagtaccactaccatggcgcgcagggcctgggcgtccccgccgcccacttcttcccgccggtctcggccgcagccgtcaccaccgtgcccgccatcatctccaagcccaccgtcatggcccctcccaaaggtaaaacatgctactgattcacgagcactacaagttcttaattccatggacagactcctgtttaggaacattgcgatgaacaattgcactagaggatcaatgtagctgcattttttagtcggtagttgcattgcaaaggaaggagttaaacccgttacctatgtcgacaaacttttctgaatctgaacttgaacttcaatcaaagagagacagctacgaagatactactaatcaccttaactaccatcagttagtacagctttcgcatgtgcactgtcttttgctgcccaaagctttgcagatctccagctagctacacatgatgtaaccagttcgcaggatctaccgagtacaccgatctaactctggtgcctgcatgtttgtgatgtacatgtactgcagtggagcaggtgacgggatgcagttgaaggggcacggcgacagtgcgaggaattaagaggaggccaaaggtgctctggcgattaacaagctgcacatgaagggttcgtccggttgtcggactaggctgcctattcgattcgtttaattcgctctaactcgtgcgtccatgggggcgcacgcccatcaaaaatctgtaacaagaaagattcaattcgtctctcgtttaccagcgtatttttcaatggtaaaccccttctttttccaagtgtctgtagtccagtcgctgcaggggacagtgaacctgaataaatcgtcataatctctcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0286500, RefSeq:Os03g0286500