Difference between revisions of "Os03g0313600"

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(Created page with "{{JaponicaGene| GeneName = Os03g0313600| Description = Similar to Genes for GrpE, DnaK and DnaJ, complete and partial cds. (Fragment)| Version = NM_001056464.1 GI:115452656...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0313600|
 
GeneName = Os03g0313600|

Revision as of 19:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0313600

Description

Similar to Genes for GrpE, DnaK and DnaJ, complete and partial cds. (Fragment)

Version

NM_001056464.1 GI:115452656 GeneID:4332642

Length

4180 bp

Definition

Oryza sativa Japonica Group Os03g0313600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11261429..11265608

Sequence Coding Region

11261569..11261733,11261826..11262005,11262171..11262386,11262468..11262650,11262788..11263009
,11263209..11263325,11263457..11263600,11263973..11264074,11264537..11264605
,11265058..11265291

Expression

GEO Profiles:Os03g0313600

Genome Context

<gbrowseImage1> name=NC_008396:11261429..11265608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11261429..11265608 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcgccgccgttgctgaaggctccggccgccgccgccgcctccctcgtcgcggcggccgcggcccaccgcgctacggccgccgccgccgccccgtccggtgcgtcccgcgtcccgccgcgacgcttgcgctgctctgcatcaggcgccgccgccgtcgaggtgcgtgctccgatggattgggcgacgaggtcgctggaggagatgcagcgggcagaggacttcgactctttctgcctgatggggctttcgccgctggatgggcggtacgagcgctttaccagggacctgaaacccttcttcagtgagttcggcctcatcagataccgggtcatcgttgaggtaaagtggctactgaaactctcccaaatccctgagatcaatgaggtgcctccattcagcaaggaggcccagttattcctggatgcgattatccaggatttcagtgttgctgatgcaaaagaagtgaaaaagattgagaaaacaaccaaccatgatgtgaaggctgttgagtactttctcaagcaaaaatgcagctcaaatccagagattgcaaaggtgttggagttcttccattttggatgtacttctgaagatatcaacaacttgtcacatgcattagctctaaaagagggggtaaatacagttatgttccctgttatgatggacatatgcaaagcaatgtgctccttggcaacacaaaattcaaccatccctatgctgtcgcgaactcatggacagccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaagcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaaattacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagattttgtcaaatcgttgggcttggagttcaatccttatgttacccagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaatgtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccattgatttcgaaaatagtgacggcaatttgactatagccaatggtacattgtcttctttaagcatgaagctaccaatttctcggatgcagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattcactcttggcttacaaagctacattgcgaggaatcaataaggttcaggtgaatgaatcccggttatctgaagacttggatcaaacatgggaggtccttgcagagccaatacagacagtgatgcgaaggtatggaatccctgaaccttatgagaagctgaaggaaatgaccagagggcaggctgtcaccaaggacagcatacggcaattcattgaagatctagacttgccagaggcggcacgatcgtcgcttctgaagctaacaccacattcttatatcggagaggcagaatttttggctagaaatatcgaagaggtggttgatctaaaatctggatttaagatcgagtga</cdnaseq>

Protein Sequence

<aaseq>MSAPPLLKAPAAAAASLVAAAAAHRATAAAAAPSGASRVPPRRL RCSASGAAAVEVRAPMDWATRSLEEMQRAEDFDSFCLMGLSPLDGRYERFTRDLKPFF SEFGLIRYRVIVEVKWLLKLSQIPEINEVPPFSKEAQLFLDAIIQDFSVADAKEVKKI EKTTNHDVKAVEYFLKQKCSSNPEIAKVLEFFHFGCTSEDINNLSHALALKEGVNTVM FPVMMDICKAMCSLATQNSTIPMLSRTHGQPASPTTLGKEMANFAARLSSIGNSFSEV KILGKFAGAVGNYNADVVAYPEVDWPKVAEDFVKSLGLEFNPYVTQIEPHDYISKLFN LFVQFNNVLTDFDRDMWTYISLGYFKQIVKAGEVGSSTMPHKVNPIDFENSDGNLTIA NGTLSSLSMKLPISRMQRDLTDSTVLRNLGVGLGHSLLAYKATLRGINKVQVNESRLS EDLDQTWEVLAEPIQTVMRRYGIPEPYEKLKEMTRGQAVTKDSIRQFIEDLDLPEAAR SSLLKLTPHSYIGEAEFLARNIEEVVDLKSGFKIE</aaseq>

Gene Sequence

<dnaseqindica>141..305#398..577#743..958#1040..1222#1360..1581#1781..1897#2029..2172#2545..2646#3109..3177#3630..3863#acgaatcatttcctatccatctcctccgccctcctttcttctccggccgcgcgccgcacggcccacctgcagccacccagcaaagccgccgcgcgcgtccttctcgctctagggttttcccacacgacaaccccccaagcatgtcggcgccgccgttgctgaaggctccggccgccgccgccgcctccctcgtcgcggcggccgcggcccaccgcgctacggccgccgccgccgccccgtccggtgcgtcccgcgtcccgccgcgacgcttgcgctgctctgcatcaggcgccgccgccgtcgaggtgagcagagactcttcccgtgcaaactctgaactcccgcttgagtagttgtcgttccttacgggggggggggggggggtctgtttggttaggtgcgtgctccgatggattgggcgacgaggtcgctggaggagatgcagcgggcagaggacttcgactctttctgcctgatggggctttcgccgctggatgggcggtacgagcgctttaccagggacctgaaacccttcttcagtgagttcggcctcatcagataccgggtcatcgttgaggtatcatttatttggattcctttgcactcgtatcatttgtagtgtatttcatcatttcctcacataaactaggatgcttgattcatgtgttaaatacagaaactggggcatgatgctagtgttataatcaatgttgcttatctgaagtgacttctggctctgtaggtaaagtggctactgaaactctcccaaatccctgagatcaatgaggtgcctccattcagcaaggaggcccagttattcctggatgcgattatccaggatttcagtgttgctgatgcaaaagaagtgaaaaagattgagaaaacaaccaaccatgatgtgaaggctgttgagtactttctcaagcaaaaatgcagctcaaatccagagattgcaaaggtatgtcagccttctgtgtgaaccaatacctgaacatactattacttcgttgctagctgttgagtgtatctttgtccccaggtgttggagttcttccattttggatgtacttctgaagatatcaacaacttgtcacatgcattagctctaaaagagggggtaaatacagttatgttccctgttatgatggacatatgcaaagcaatgtgctccttggcaacacaaaattcaaccatccctatgctgtcgcgaactcatggacaggtacgagaaccacctctgaagtatactcagtaatatatgcttgtactgtcgtacatatgtacacagagtcactgtaatcgatgctatatgcttagaagttataacgctagcttagatttccactttcctgcttgtagccagcatcgccaacaactctgggaaaagagatggcgaattttgcggccagattgtcaagcataggaaatagtttttctgaggtcaagatactagggaaattcgctggagctgtcggaaattacaacgctgatgttgttgcatatccagaagttgactggcctaaggttgcagaagattttgtcaaatcgttgggcttggagttcaatccttatgttacccaggtggtttatattcattattttgatatccagttgtttcatttgtattcccagttcagtgctttattggagttattattcttgaactatggtggtgtggagaatttcctattaatacactttccatttatctaactgcgctgtaaattctaaagtcatatgatactctttggtctgacgcagttttaacttttttttacagattgagccacatgactatatctcgaagctcttcaatctatttgttcagtttaacaatgtcttgactgatttcgatagagacatgtggacctatatatcactaggctacttcaagcaggtaatactaacatgcaaggactgttctttaaggtttggttgaattcgtttagtacatagtgggaaaaacttagtggtctacagttttagattctgtttgaacttactgcatccttccaaatgttgttccagatagtaaaggctggtgaagttggatcttccacaatgcctcacaaagtcaatcccattgatttcgaaaatagtgacggcaatttgactatagccaatggtacattgtcttctttaagcatgaagctaccaatttctcggatgcaggtataatactgtctgtactcttcaatttccacttttactatctccagttgtgaaaaaggggtagtacatcatccattgttgatgcacatgcaagaacagacgcctaacttgccacaaatggtgttcttaagtttggctttattaggctatagtccatggatttctgtcgaactcgtggcacacgctacactttcttacctctgcacaatttaatgctttcttacctcatttttcaatgcaaccgcaattttggtcaaccaatgtgcatgcaaaaattgtagcttgccactgatgtaaaatacagcaagcagtcagacatgcctaactatttacttaagattgaactaatgagcaaccatgtctctctgtcagcgtgatctcacagactcgactgttttgagaaatttgggtgttggattagggcattcactcttggcttacaaagctacattgcgaggaatcaataaggttcaggtaggtggccacaatcctcctcttgtttgatttggttgtttcttgaattattcttgtatagataattttatcattgtccaagtattgaactagcatattttgtatttgaagtctttctatgcatgctgtgatgctgaatggttgatgcccaagcatgcacatccacccacccacactttatgtttttggactaagtgaactataaagtgatggatgtggctaggtcttaccccaactattatttgtatctactcaatatgcacaggaaggacctcagtcagggtatctgtcgtactagaaacaagatattcctttgtgcactacacataatttcattttcggactattggaattttagacatttagtctgttttgtaattgaccttaactttgttaagtttactagccaaaatgtaactatgacacttcgttgtatttatgctgaattttgcctgttgttaggtgaatgaatcccggttatctgaagacttggatcaaacatgggaggtccttgcagagccaatacagacagtaagaccattctttttgtcctctatatggtttctggttgttttcacaatggtatgcttccatggaggagttgtattggtttgtcctagaaatttgtgcgcctcttcagatgctttcaaattgtcgaaagtgtcttttggatgcttgttttgtgattttgcattgcccttaatgctttgttaggtaggatttttacgtttttagccaggtgtattcatggtgaattttgatactgagaatggttagtttaattgcttttgtttggttcgaaaacgacatattctcctacatcgtacaatattttgaaaatttctcagaacttataagtttgatattgggggtaatttcacctattggcattttcaccagatacatcaactgtattcatcatcatttgtctgtcgtctttcaagctcagatgcatatcatacattattatatcatctttgtaggtgatgcgaaggtatggaatccctgaaccttatgagaagctgaaggaaatgaccagagggcaggctgtcaccaaggacagcatacggcaattcattgaagatctagacttgccagaggcggcacgatcgtcgcttctgaagctaacaccacattcttatatcggagaggcagaatttttggctagaaatatcgaagaggtggttgatctaaaatctggatttaagatcgagtgagcacccgttccggaactcggtaatccccccaaattttttaccaggacaggaagaataacgggcgaaaatcttcaaagctgagggtgaacaccgaattgtgtcctgacctttaacaacttccggttacgctaattcagctgtgctgattgaaaggcttttggatgcacgcaaaatgcatccgtggaatttgtgccatgcgtgtttcggaataaaatcagaagcaggataaatcttgctcgcctgtctttttcaatcgcaagtggccttgctacagtcttcattaatgcagcattcgcctttgcatcgagcaggctacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0313600, RefSeq:Os03g0313600