Difference between revisions of "Os03g0336700"
(Created page with "{{JaponicaGene|
GeneName = Os03g0336700|
Description = PAP/25A core domain containing protein|
Version = NM_001056579.1 GI:115452886 GeneID:4332766|
Length = 7078 bp|
Def...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0336700| | GeneName = Os03g0336700| | ||
Revision as of 19:35, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0336700 |
|---|---|
| Description |
PAP/25A core domain containing protein |
| Version |
NM_001056579.1 GI:115452886 GeneID:4332766 |
| Length |
7078 bp |
| Definition |
Oryza sativa Japonica Group Os03g0336700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:12544932..12552009 |
| Sequence Coding Region |
12545049..12545273,12547269..12547454,12547704..12547796,12547987..12548169,12548281..12548383 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:12544932..12552009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:12544932..12552009 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatggcgggcggtgggggtgggggagggggagggacgctggcggcggcgatggcgagggcggcgccgggggcggcggcgatcccggcgggggcggtggcgcgcgcggaggaggcggcgggcgaggtggtgcggcgggtgcggcccacggaggcatccgagcggcgccgcgcggcggtcgtcgggtacgcgcggaggctcgtcggcaccgcgctcggctgcgaggtctttgcatatggatcagttccattgaagacttaccttcctgatggggacgttgatctgactgtactcggcaatacatcttatggtagtactttaattgatgatatctaccacatccttcagtcagaagagcagaattgtgatgctgaatttgaagtaaaggacttgcaactgatcaatgctgaggtcagacttattaaatgcactattgaaaatattgtcgttgacatctcattcaaccaaactggtggaatctgcgcactttgcttccttgagctggttgaccgtaaagttggaaaaaatcatctagtcaagaatagcattatattaatcaaggcatggtgttattatgaaagtcgtctactaggagctcatcatggactgatatcaacttacgcactggaaactcttattctttacatattcaatctattccacaaatctctccatggccctctggaggttttatataggtttctggagtatttcagcaagtttgactgggacaactattgcataagtttaaatggccctgttgcattatcgtctttgccaaatcaaattgtcgaagcaacaaatacacctggcagtgatttgctgtttgacaaagagttcctcaataactcggtgcaaaaaacagattctaatgcatgcaatactgagttccgttcaaaatatctgaacataattgatccactaaaggaacacaacaatcttggcagaagtgtgaacaaagccagctttaatcgtattcggactgctttttcgtatggtgctcagaagcttggtcaagttctcttgttacaaccagaacttattcctgatgaaatttatggatttttcaagaatacattgaataggattggaagtggagtaaggccagacattggagatgaaagctataatgatgcatttcgttgtgagtccttccttggtcctggcaaggcattgtgggatgagatgtcgagcatgaaaatttcctgcaataatcaagatgagaacagaggtcctcaccatctttcaaagtgcttagttaacaatgactcatatgccaccttgaatgtgcctacacattttcatggagatcacatggtagcatcaagtactgatttgagtctaaaatcgtcctgtttcatccaagagacaccaaatcagtatcctttgttttacctagaagatggcaatggtagcagcgaacagtacttggaccatgaaatggtggaacaggcatcttgttgtacagctgaaacctgccatgcgaatgaagaaccatcaatgcatccacaagtttatccaaacaatacgttacatacattttactcaagtttggccaataatttggaatattccaaatctggtcagtcagacatgacaaattcgagtataaatgttgcccatgaggaaaaacaaaaattttctccctccccattgagcttggtggatctatcaggtgatctagatttgcaattgagatgcctccgccaagttcagtatcacctagaatacatgtttgatggttttttgcagtctgttcaagaagcatcttctgactgtaaggttgcaagggactcgtttgaaattccagctgttaacatcacatcgaattctgatgtggtgctgccaggtctgttatcaccttcatctactgaaactgatgagaggagattatctccagtttcctcttctcatagcaccgaagattcttcacagcagtcacatgatgagagcaactggggtgcgtcttgtcagcagaactttttattaataccctctcaaacaattgctccaaccaatggactgtcaccatgttcttcttatgctaattcagataattctgttcaattgtatgatagctcagatgatatctccaatatgcatgaaacagatcaacatattctccaaaagcacatggtatctttaggacagaacaagacactaatcaatcgacaagtgagagttaaaagcaatcaagcatcagttccaaaaggaaaattttccatttgtaaggagcaaataacacaagacactgcaaccaaggacataaagttaagccggcatttgagagtcaaggacagtgagcatgaatatataagcactgctaagaagatttcgagctataattgtgacacttgcttagaatgtgtcaaacctgaaagtgaagcaatgataccaaggcattacaagcatgcccgctcaagcaagaactcatttgagcatcggatttatgatattgacatggggtttgcccgatctggtagttcacggaatcaaatgccaaaatatcaatcactgaagaatcaggatatgtcaagcttaaatgtccaaaaagagcatgaaattaactggcccagaaaacaaatgccatccgagctgttgaagctccaaaacagtctacgtggcagggcttgctcaaacaagaaattagctgcaaaacaaattaacaataatcacaaagaacatctatcttttgtaagggatccagaacagatgccatataatcaggttaactcaaacaaagagtttgagactgttggcaaatccagccaattattgccacgggtacagctctctcttcataacgacagaagccttacagcatctacttgtcagtcctcattccctgtgacaaaaggatctactcaattcaacgacttggagatgccttcactagaaaatattgagtttggaactttggggtctttttcattgacacttgtgtcaccaaaatcgaataagaatcccaacacacactcaaccagtaagacatgtgccgatgctgctgcattggcattgcaaagccatccaacacaaagcaggtcaccaggattctacaaagttggagatgaagatcacttcccacctctccgtgctgggactcgctga</cdnaseq> |
| Protein Sequence |
<aaseq>MMAGGGGGGGGGTLAAAMARAAPGAAAIPAGAVARAEEAAGEVV RRVRPTEASERRRAAVVGYARRLVGTALGCEVFAYGSVPLKTYLPDGDVDLTVLGNTS YGSTLIDDIYHILQSEEQNCDAEFEVKDLQLINAEVRLIKCTIENIVVDISFNQTGGI CALCFLELVDRKVGKNHLVKNSIILIKAWCYYESRLLGAHHGLISTYALETLILYIFN LFHKSLHGPLEVLYRFLEYFSKFDWDNYCISLNGPVALSSLPNQIVEATNTPGSDLLF DKEFLNNSVQKTDSNACNTEFRSKYLNIIDPLKEHNNLGRSVNKASFNRIRTAFSYGA QKLGQVLLLQPELIPDEIYGFFKNTLNRIGSGVRPDIGDESYNDAFRCESFLGPGKAL WDEMSSMKISCNNQDENRGPHHLSKCLVNNDSYATLNVPTHFHGDHMVASSTDLSLKS SCFIQETPNQYPLFYLEDGNGSSEQYLDHEMVEQASCCTAETCHANEEPSMHPQVYPN NTLHTFYSSLANNLEYSKSGQSDMTNSSINVAHEEKQKFSPSPLSLVDLSGDLDLQLR CLRQVQYHLEYMFDGFLQSVQEASSDCKVARDSFEIPAVNITSNSDVVLPGLLSPSST ETDERRLSPVSSSHSTEDSSQQSHDESNWGASCQQNFLLIPSQTIAPTNGLSPCSSYA NSDNSVQLYDSSDDISNMHETDQHILQKHMVSLGQNKTLINRQVRVKSNQASVPKGKF SICKEQITQDTATKDIKLSRHLRVKDSEHEYISTAKKISSYNCDTCLECVKPESEAMI PRHYKHARSSKNSFEHRIYDIDMGFARSGSSRNQMPKYQSLKNQDMSSLNVQKEHEIN WPRKQMPSELLKLQNSLRGRACSNKKLAAKQINNNHKEHLSFVRDPEQMPYNQVNSNK EFETVGKSSQLLPRVQLSLHNDRSLTASTCQSSFPVTKGSTQFNDLEMPSLENIEFGT LGSFSLTLVSPKSNKNPNTHSTSKTCADAAALALQSHPTQSRSPGFYKVGDEDHFPPL RAGTR</aaseq> |
| Gene Sequence |
<dnaseqindica>118..342#2338..2523#2773..2865#3056..3238#3350..3452#3539..3709#3930..5098#5329..6239#6722..6788#ggttttcccccaaacccccccccctctctctctctctctctctctctctctctctctttccatttgctgtgcccggatcccgcatggccaccggcggcggggtctaggaggaggaggatgatggcgggcggtgggggtgggggagggggagggacgctggcggcggcgatggcgagggcggcgccgggggcggcggcgatcccggcgggggcggtggcgcgcgcggaggaggcggcgggcgaggtggtgcggcgggtgcggcccacggaggcatccgagcggcgccgcgcggcggtcgtcgggtacgcgcggaggctcgtcggcaccgcgctcggctgcgaggtgagtgcccgggcggttcgcggcggggcgcgcccttctgcccccgtttccactccaatttcgggtttttgaggtttctcgggattctcatcctcgtttgattggggcgttttattcttcatttttttttgtttagtgtttactctgcttccgtcgctgtctgtgggatttgacgggaattctctccacgggaggattatcctttttaattaatcggcttaggttcgtacggatcaagactgattcctaaactatttgctcgcggcgcgtcgttgcaattctgccttgttttattttcgctgaccttcacgggggaacaaaatcgggatcatttttttatttcacattttttaattactaataataaactactattaactagccctcgtgaatccaaactgctgaattccgaactttagctgaggccaccgtgcgctcggatctatggccttttcgctttttggtttaataaagggttttctttttctgatggaacgtttcttgacgcgttcaagtatttattttctgttggcacaataatgttttatgttcgcttgcaagcatcacttccagttccaacgaaaaggcacgaattgctttataaaatccaactttctacatcctaaaagttcctttcaggcggaaacaactttcttctgctggtccagaagagagacaaaaagaaaaagaaaaaaaaactcctttttcttgttttggttctgtttctgctcgtgatgatcttgactgcctgccaggagaagcagtacccttcacggttcactctgtccatggtgactcatgcatccacgtggatttatccaatagtgtggcaactgatcaatgctgtagctgaatcttctgggcatgttgtgtctgaattgagtattttgacatagcatctgggcatgttatgtctgaattgagtgtttcgacagagcagggggtgacatttagcccatgtacacggacagctgcctgccaacatcctgcattcagttctactgcgtactttgaattattacgagctcacaaattcacagttgtttactgatcggaattcatcggtccactgtttttagtcgtacttgaactttgtccgtgcgctcctttacttatgtgtaatctcttcgctccgtacccacagatggtagatctggaaaagtggtccttatctgttgctattctgctgaacacttttaatgcgtactacgagatgtctatacagtctttgtatagctggaattgcttggaaacgtgtggcaggctatagttgataggcattagttttgcagtaggagtcatgttgtggtgtcacctagcaaatgatattcattgggcatcaaagcagtaatgttttcgcagtaatgttttcgcttaattattgtcacatgtgtgtatgtgtgccaatagtgcgcaacacagaatccctgcaagatgccaattgactttgacttttctccgccttatatgttgtttctagttcttgtttttttttttttaaaaaaatgtcgtatttgctgattggttgcttacctgcttgaaaaatatgattttgtgattcatgatagcagctcacttggtggcatattggtcgctattttctagtcatttcatcattcatacttaagacagttatattatgatttgtttccatggatgtatttagttgttttggcgcatgcaaaactgacatgactaagtatatatgtttcttagtggaataacatgatggtgacccaacaaaaagttcatcttttaattgttctcttggaaaaaccaatggtaacacactcacataccaggaatcttcgtggatatgtgatatatcttggttgtggttctctatcatattactacctgtatatgattgttgcaatgacttcttattctatctagcaatatctgttggaccttttgacgtgccaactttttgtgcaaaaatatttctttattatttcctagttctaaaatgtttcttctttattcgatatgtaggtctttgcatatggatcagttccattgaagacttaccttcctgatggggacgttgatctgactgtactcggcaatacatcttatggtagtactttaattgatgatatctaccacatccttcagtcagaagagcagaattgtgatgctgaatttgaagtaaaggacttgcaactgatcaatgctgaggtgcaatttcttgttggcatgtttatgcttgctaattgctacacattcctagccattcatgtgaactgtagtttgggaaaatccttttgtttctgctggtaacatgtgtaatcatttcacttcttttaataattgattgaaataaattataagttaagcttataaactatgtgcctcttgttatccctatatgttatatttctcacacataaaccacctcttaatttctgcaaatgtttatacattcaggtcagacttattaaatgcactattgaaaatattgtcgttgacatctcattcaaccaaactggtggaatctgcgcactttgcttccttgagctggtataataatacttttcttttcgaaaattttatgtacttctattccactttaatgtccttctggttaattaaacaaacagttattgaatgtgtatagcactcgatattggtttcgtgtgcttgtctaggtctgcttttattttgttactatgccaaaccttggaaaagtaaatagttgttcattcttcaggttgaccgtaaagttggaaaaaatcatctagtcaagaatagcattatattaatcaaggcatggtgttattatgaaagtcgtctactaggagctcatcatggactgatatcaacttacgcactggaaactcttattctttacatattcaatctattccacaaatctctccatggccctctggaggtaagtacaaataggaaggaactggcttcttcagtcatgtaaaaacatctttaaccaataatacggattataactcttgacctttttacttcatgtttgtcttgttaataggttttatataggtttctggagtatttcagcaagtttgactgggacaactattgcataagtttaaatggccctgttgcattatcgtctttgccaaatcaaattggtgcgctacactgtaatcttatccttgactgtaaccaactaatacatatattctgtttttaccctaaaactttgtatgtcttgcagtcgaagcaacaaatacacctggcagtgatttgctgtttgacaaagagttcctcaataactcggtgcaaaaaacagattctaatgcatgcaatactgagttccgttcaaaatatctgaacataattgatccactaaaggaacacaacaatcttggcagaagtgtgaacaaaggtctgaaactaaaggcacctgtctgttttcttcctctaaattatatttcaaaagaatttctacaaagatgtatgggcatgcatatcatagcatgtgctgagatgcttcctatgtgcatataaaccataatcagcatgcggttgaacttgcacatagtaggggttttctgtacattatttcacttctactaagtttatgtagacattttacttttgtgcagccagctttaatcgtattcggactgctttttcgtatggtgctcagaagcttggtcaagttctcttgttacaaccagaacttattcctgatgaaatttatggatttttcaagaatacattgaataggattggaagtggagtaaggccagacattggagatgaaagctataatgatgcatttcgttgtgagtccttccttggtcctggcaaggcattgtgggatgagatgtcgagcatgaaaatttcctgcaataatcaagatgagaacagaggtcctcaccatctttcaaagtgcttagttaacaatgactcatatgccaccttgaatgtgcctacacattttcatggagatcacatggtagcatcaagtactgatttgagtctaaaatcgtcctgtttcatccaagagacaccaaatcagtatcctttgttttacctagaagatggcaatggtagcagcgaacagtacttggaccatgaaatggtggaacaggcatcttgttgtacagctgaaacctgccatgcgaatgaagaaccatcaatgcatccacaagtttatccaaacaatacgttacatacattttactcaagtttggccaataatttggaatattccaaatctggtcagtcagacatgacaaattcgagtataaatgttgcccatgaggaaaaacaaaaattttctccctccccattgagcttggtggatctatcaggtgatctagatttgcaattgagatgcctccgccaagttcagtatcacctagaatacatgtttgatggttttttgcagtctgttcaagaagcatcttctgactgtaaggttgcaagggactcgtttgaaattccagctgttaacatcacatcgaattctgatgtggtgctgccaggtctgttatcaccttcatctactgaaactgatgagaggagattatctccagtttcctcttctcatagcaccgaagattcttcacagcagtcacatgatgagagcaactggggtgcgtcttgtcagcagaactttttattaataccctctcaaacaattgctccaaccaatggactgtcaccatgttcttcttatgctaattcagataattctgttcaattgtatgatagctcagatgatatctccaatatgcatgaaacagatcaacatattctccaaaaggtaggagctctctgttctcagttgtcatgagtttatatctcttacttttttttggcatacattttcattgtcctcttagggccaagaaaatctagatccgatatgaatacttgactattttatatcttcattatatatgctatacatcttgtcccttggatgtctgacactgacagcttcacttaaacctttagttgttctgctaatcagttaccttatttgtgttacagcacatggtatctttaggacagaacaagacactaatcaatcgacaagtgagagttaaaagcaatcaagcatcagttccaaaaggaaaattttccatttgtaaggagcaaataacacaagacactgcaaccaaggacataaagttaagccggcatttgagagtcaaggacagtgagcatgaatatataagcactgctaagaagatttcgagctataattgtgacacttgcttagaatgtgtcaaacctgaaagtgaagcaatgataccaaggcattacaagcatgcccgctcaagcaagaactcatttgagcatcggatttatgatattgacatggggtttgcccgatctggtagttcacggaatcaaatgccaaaatatcaatcactgaagaatcaggatatgtcaagcttaaatgtccaaaaagagcatgaaattaactggcccagaaaacaaatgccatccgagctgttgaagctccaaaacagtctacgtggcagggcttgctcaaacaagaaattagctgcaaaacaaattaacaataatcacaaagaacatctatcttttgtaagggatccagaacagatgccatataatcaggttaactcaaacaaagagtttgagactgttggcaaatccagccaattattgccacgggtacagctctctcttcataacgacagaagccttacagcatctacttgtcagtcctcattccctgtgacaaaaggatctactcaattcaacgacttggagatgccttcactagaaaatattgagtttggaactttggggtctttttcattgacacttgtgtcaccaaaatcgaataagaatcccaacacacactcaaccagtaagacatgtgccgatgctgctgcattggcattgcaaagccatccaacacaaagcaggtaaaatatttatactcgctctcacattataagatattttagcgcctccatccctcgtctaaattgactatatggtgttaagttacttgcatttctctttgataactgatacatcaaaacaattggtatttggtactcccagcccaccaccctaaatatcttattaacgaatctattcaaaacctaaaatatcttataatgtgaaacaaatgaagcatctactaaatcttcagcctgcaaatatatcaaagactacacagcgaagacatttcagaaaaagtaaaggatcatttaagctctagttagtttgttatttgcatctccagttcattcagtccatgagatagtttttgtgcttttatgctactactatgtataatatgcattctgataacgtaatagtcagtccatgagatagtttttgtgcttttattctacaattcataatgtgcgttctcataatgtaatcttcgctatgttaggtcaccaggattctacaaagttggagatgaagatcacttcccacctctccgtgctgggactcgctgagactttcggtacatacacagatgatacagttgatcataggtttagagaactaaaaggtaaagagaagagctaacaggttgagcttttttcataacctcaggagagcgcaaatgcgaggattctaatagcatatatattcgtccatgtaaagttctgtcgatctcttgtcctcctcaattgtctatagttaggccaagaaggctaatgggtagcaactaattataccattgtagttcttttaccttaagtttaacttgaaagaagaaaaaatcgggggaatatgttagctt</dnaseqindica> 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| External Link(s) |
