Difference between revisions of "Os03g0411000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0411000| Description = Apoptosis inhibitory 5 family protein| Version = NM_001056881.1 GI:115453490 GeneID:4333093| Length = 6172 bp| Defi...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0411000|
 
GeneName = Os03g0411000|

Revision as of 19:37, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0411000

Description

Apoptosis inhibitory 5 family protein

Version

NM_001056881.1 GI:115453490 GeneID:4333093

Length

6172 bp

Definition

Oryza sativa Japonica Group Os03g0411000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17584508..17590679

Sequence Coding Region

17584715..17584753,17585549..17585675,17586402..17586528,17586943..17587508,17587973..17588288
,17588450..17588690,17588811..17588900,17589420..17589857,17589954..17590325

Expression

GEO Profiles:Os03g0411000

Genome Context

<gbrowseImage1> name=NC_008396:17584508..17590679 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17584508..17590679 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacccgcgcgcgtcgaccggtcggagatgaggcagaacacaagtcaccaaggttccaatgatcccagagtacaaaaggaaaggcaagcagaatgggccagacctggaagagtttttaataggaacactaacaaaggaggttactttcggaattcattgcctggagtcactagggagtttcgtgttgtgaaagacaatcgacagaaggtagttggtgagactataccaggatcatttcataatggagtcccaagcaatgaacagatcgcttccaatattggagacaaaagctcaactgaaaagttacctgcacaacgccatccggttactcaaaattctaatggacgtggggtagctcaagctgataatggacgcaaagaagtcaagccttctaatgaccaaacagtgggacaatctgatgggatgattacaacaatggttggttcacatgcagttctagcaaagggtaatcagaacagagtgcttgctgtgccatcaggaacaaataattttactggtgaactttgctgctcttcgtcagatccaatacatgtaccctctcctggttctaaatcagctgggacttttggagcaataaagcgtgaggttggagtagttggtgctaggcaacggccatctgataatacagcaacaaatacatccacttcaaacagttcagttaaggtgccaacaagtacagcaacaaaagagaatgcttcaaatggacagcaatctagatcctctggtgtatcatcgaaaaactcccgtcctagttcatctacacacttgagcagtagaccatcttcttcgagtcaatatcattctaagccaaatactcctgttggtcatccaaaagtgaacccacaattggagtggaaacccaaatcagtaagccccagtcctgccaatcatgcagataatgtggtacattctagtgctgcatcatctgttgatggtaatcaggcacacatggctggtttgtctaagaagctttcacaaactaatgtttctgaagatgagcatgtcatcatacctgcacacctcagggtaccagactcagaaagaacacatcttatatttggtaattttgaatgtgatgttgagtcgaaggcttttacattagctcctgatgcttcaactaacagagagtttaatgcccattcttcttcaagatcaactgatgatgtgcctcctactgaccagacggatcttgttggctcttgtgtcatgcttccgaaatcagattcctttgtttcagtttccgaatatcagcacccattgactgaggacatggaggtcttgagtccaggtgtttttggagagcataggacaaatgatatgatttcaacccaggtctcacattcttcacctcaaccccagcatcaggacaattcagcagtgcatgactttaaggaatatgagccagattctaggtatgagatgccatttatcactaaagctgttgatagtgaggcgacccaaaatataccttatccgtctgaggtgatgggcttgcatgctgcaaatttcaatcagttatctgttactgcagcaactcagcacccagtgcctcaaatgtaccacatgcatgtatcgcaatatccaaactgcttgccatatcgacatgttttctctccatactatgtgcctccagtggctgttcaaaactattcaagcaatccagcatttacacaattgccaagtgccagcagctatttggtaatgccaaacggaacgtcacagctagcacccaatggcatgaaatatggaccacctcatcagtgtaagcaaatgttccctggtggccctgctggatacggtggttttacaaatcagaatggttacccagtcaatactggtgtaattggtggcactggtagtgtcgaagatgccaatatgagtaaatataaggacaacaatctttacacactcaaccctcaggctgaaacagcagatgtgtggattcaggctcctacagatattcccgtcatgccgtcaacaccattctacaacatgatgggccaaccaatgtctccccatacagcatacttgccaccgcacaatggtcatgcccctttcagcccagttcaacaccctgctcacctgcagttcccagccatgccccacggactgcagccgacaacgatgaccatggtgcagaacccacaacccatggtgcatcagccagcctgtccgccgttggctggaaatatcggcattgatatggcagccatggcttctggagctcaggttggagcatttcagcaaaaccaactcagccatctcggctgggctcctcccagttttttatga</cdnaseq>

Protein Sequence

<aaseq>MPPARVDRSEMRQNTSHQGSNDPRVQKERQAEWARPGRVFNRNT NKGGYFRNSLPGVTREFRVVKDNRQKVVGETIPGSFHNGVPSNEQIASNIGDKSSTEK LPAQRHPVTQNSNGRGVAQADNGRKEVKPSNDQTVGQSDGMITTMVGSHAVLAKGNQN RVLAVPSGTNNFTGELCCSSSDPIHVPSPGSKSAGTFGAIKREVGVVGARQRPSDNTA TNTSTSNSSVKVPTSTATKENASNGQQSRSSGVSSKNSRPSSSTHLSSRPSSSSQYHS KPNTPVGHPKVNPQLEWKPKSVSPSPANHADNVVHSSAASSVDGNQAHMAGLSKKLSQ TNVSEDEHVIIPAHLRVPDSERTHLIFGNFECDVESKAFTLAPDASTNREFNAHSSSR STDDVPPTDQTDLVGSCVMLPKSDSFVSVSEYQHPLTEDMEVLSPGVFGEHRTNDMIS TQVSHSSPQPQHQDNSAVHDFKEYEPDSRYEMPFITKAVDSEATQNIPYPSEVMGLHA ANFNQLSVTAATQHPVPQMYHMHVSQYPNCLPYRHVFSPYYVPPVAVQNYSSNPAFTQ LPSASSYLVMPNGTSQLAPNGMKYGPPHQCKQMFPGGPAGYGGFTNQNGYPVNTGVIG GTGSVEDANMSKYKDNNLYTLNPQAETADVWIQAPTDIPVMPSTPFYNMMGQPMSPHT AYLPPHNGHAPFSPVQHPAHLQFPAMPHGLQPTTMTMVQNPQPMVHQPACPPLAGNIG IDMAAMASGAQVGAFQQNQLSHLGWAPPSFL</aaseq>

Gene Sequence

<dnaseqindica>208..246#1042..1168#1895..2021#2436..3001#3466..3781#3943..4183#4304..4393#4913..5350#5447..5818#acccctcccaaatcccttctctctaccctattccccacctccgcctccgccgtaatcccacctccccggccaccgccgccgccgtcactccggccaccgcaccgtaactcccactgcggaagcagcccaggaggtaggcggtgaagcggggggtgggaggttttagactagacggcgcgccgctcgccggcgaggtcgcccagccccatgccacccgcgcgcgtcgaccggtcggagatgaggcaggtcagtttcggacgaaaaaaataaaagaggcatgggcagattggagatccgttcagggtttaatcgatttcgttatctctgttcttattaaccaatccaatccaatctcgtctcgatttgtgggttgggggtgcagtttggagttcagctgaaaccctatgcccccgcgattaggtccgatcctgtgtttgatggagacatgacaataacaaagagatggggttctgaatgtgctgtgtatattcgctcctgatgatgatgcatgaatgctaacgtgtttaatatttgaatttaactgtgttcgaccttatgtgaaacctcgttttattgtttattattataataagtagtgctgctttttttttcagaccttcctgttattaggtctgaaattaaaaggattgatgtttgtgttttgcaataaatttttagatggatggatgtttcctcttaagggtcataggattttaatgtggacactactagtaaaaatttggttcttcgttgtaccgtgtcctgttggtactttagcagtggaagcccacactagatttggatatcatacttgatatacaaattggctattagttttttgctaataaatattactggctttctgattaagaaaagctcaaaaatgttatagcctgctaactgttgctattttgatataaaatgtatttcatatttaggattttactttgttaatgaggcatcaacaatatgatttgtgattactgacttactgtgtttatccaagtcttttcctattcttagcttgttctgttattgcagaacacaagtcaccaaggttccaatgatcccagagtacaaaaggaaaggcaagcagaatgggccagacctggaagagtttttaataggaacactaacaaaggaggttactttcggaattcattgcctggtaaactttcataagtaaatagcataaagtgttctttttaataactagtgagtgaacatgtcttctgtggtacttattccaggtgcattgcgtgaatatttttaccctgttagaggatcacttctgttttttctgtacagtgtgctctgtggttaatgtttgcatcttattgttgcccgaagtgcaagcttgtggtatctgagatgatatgttactggatttgctcattatcgtttttattgatgctgacatgtgattggttttgtgaattccatctgcaaacaatgccatcttgggaaaacccttacattgcttaatcagagttattattcaaattatcagccaatcgttgattaagacagaaagaaatgcatgtttccttgtattcttagccccttgggcatcttaccaccaactgcatgcttgtaagtgtacttctacactgccatactaacacgatggatatatttgcctgggcaaacagttatgaaataaggaatttatggagggttggcaactcttctacatcacaataaattgtctttttggtggttgtaaaatagcttctactagcttgaatgctactcattttcaacatagcctggactcctggggtagaagttattgttattaccagtaataacaactattctatgttctacttagctgttctgtgaccaattcaaggcgctatatagtctaatttttaaaagctgatatttgtaggagtcactagggagtttcgtgttgtgaaagacaatcgacagaaggtagttggtgagactataccaggatcatttcataatggagtcccaagcaatgaacagatcgcttccaatattggagacaaaaggtagagtatgcatgatagtagaaatgaacagatcgcttccaatatcaaacatattgcttccaatattttccctttggaatatgcacttgagtatttacacagatagaaaaatatgtcagctgaggtaatcaaatgatcaaaaattgtgttagcagttgtatagaacaaactataatacatctgtagatgtacttattgtgtaattgaatgacatgccttctttcccatgtgctattctatctgcattatacaattcacaaccagtagttatttacttgaatatttaatagcactattcgtttcactgctttatggtttgacatcttgctttctttcatggaaactgaatttgctttcaaaaatttcaccagtatcacttctgttcatatatgtctttgtcatgtttctctgaagctcaactgaaaagttacctgcacaacgccatccggttactcaaaattctaatggacgtggggtagctcaagctgataatggacgcaaagaagtcaagccttctaatgaccaaacagtgggacaatctgatgggatgattacaacaatggttggttcacatgcagttctagcaaagggtaatcagaacagagtgcttgctgtgccatcaggaacaaataattttactggtgaactttgctgctcttcgtcagatccaatacatgtaccctctcctggttctaaatcagctgggacttttggagcaataaagcgtgaggttggagtagttggtgctaggcaacggccatctgataatacagcaacaaatacatccacttcaaacagttcagttaaggtgccaacaagtacagcaacaaaagagaatgcttcaaatggacagcaatctagatcctctggtgtatcatcgaaaaactcccgtcctagttcatctacacacttgagcagtagaccatcttcttcgagtcaatatcattctaagccaaatactcctgttggtcatccaaaaggttagcgtttccatggaaacttacttggttgggaattgagatgtgtaaaaagtacaattatggtgggtatgtcattttgttgcacattcggacataaacttctttcctgctcaaaaatgaacagagcagtagctgttagcctgttaggtcactttgcttagcataacatgctaatgacaaaatatattcatttgagtaatttccagtgttagcaatgcatagtttgacttggagccttattgtattatatatccacatcattgtacattttctctatgtaacactgttttatattttctgaaaaccaatgatgctaattgttgccattcagttttgtataaattcttatgtactgtctttcaaagtatttggacaattctagatgggcagagattatttaagttagttttccatcttttggagaactgcatttttgttaaacagatattgtggtttatatgcagtgaacccacaattggagtggaaacccaaatcagtaagccccagtcctgccaatcatgcagataatgtggtacattctagtgctgcatcatctgttgatggtaatcaggcacacatggctggtttgtctaagaagctttcacaaactaatgtttctgaagatgagcatgtcatcatacctgcacacctcagggtaccagactcagaaagaacacatcttatatttggtaattttgaatgtgatgttgagtcgaaggcttttacattagctcctgatgcttcaactaacagagagtttaatgcccattcttcttcaaggtgattttgctgcatcttctctttgatataatcttgcatcataactattgttgaagtgttcagatttctactatgaagttatccttgtgtccaaattaaatctgagacatgccacatgtaattattcgttgattgcagtttgacgcattatactcttgcagatcaactgatgatgtgcctcctactgaccagacggatcttgttggctcttgtgtcatgcttccgaaatcagattcctttgtttcagtttccgaatatcagcacccattgactgaggacatggaggtcttgagtccaggtgtttttggagagcataggacaaatgatatgatttcaacccaggtctcacattcttcacctcaaccccagcatcaggacaattcagcagtgcatgactttaaggtgaatagaatatattaagtggatagaatatattaagtggatggcagtgtttcttattcgtggttcagcttagtggttttacctgacattcattcattcattctttttctcgtgtaccaggaatatgagccagattctaggtatgagatgccatttatcactaaagctgttgatagtgaggcgacccaaaatataccttatccgtctgaggtaataccaccatgccacctttatgttcaagtccggttattatgatctggtgtctgcctgtctgctatacgtcgctttcgattttacattcataaagcacacttaagcaaacagcctttatattcaagtctggattcctctagatttatttgcagattgtgaatgcaacggtttttgagaacctggttatttgaccttgtattagaagtttcagaagcatcagagatctgcatttgtctatgtgaacatctgttacagctccaaagaagctaaaagggaatccaagctgttaacgcagcttgcttttccatactacctgctagtattttatcttttgtttttgcacttttggcctgaaattatgttttatcaatggttggactaatcttgactgatggctccagcatttacttgtagttatagtactggatgtttagctttttcttcttagggcttatccactgtccaagatcaatgtttccttagcagctgtgacattgtgtgaaactctgttgataggtgatgggcttgcatgctgcaaatttcaatcagttatctgttactgcagcaactcagcacccagtgcctcaaatgtaccacatgcatgtatcgcaatatccaaactgcttgccatatcgacatgttttctctccatactatgtgcctccagtggctgttcaaaactattcaagcaatccagcatttacacaattgccaagtgccagcagctatttggtaatgccaaacggaacgtcacagctagcacccaatggcatgaaatatggaccacctcatcagtgtaagcaaatgttccctggtggccctgctggatacggtggttttacaaatcagaatggttacccagtcaatactggtgtaattggtggcactggtagtgtcgaagatgccaatatgagtaaatataaggacaacaatctttacacactcaaccctcaggtaattatatatttcatccttagaccaagccttttctgatcataattttgacacatgctgtaccttaacatgaataatatttgtgcttggttgcaggctgaaacagcagatgtgtggattcaggctcctacagatattcccgtcatgccgtcaacaccattctacaacatgatgggccaaccaatgtctccccatacagcatacttgccaccgcacaatggtcatgcccctttcagcccagttcaacaccctgctcacctgcagttcccagccatgccccacggactgcagccgacaacgatgaccatggtgcagaacccacaacccatggtgcatcagccagcctgtccgccgttggctggaaatatcggcattgatatggcagccatggcttctggagctcaggttggagcatttcagcaaaaccaactcagccatctcggctgggctcctcccagttttttatgatgatttggatggcagtgctctcatgagacgacaagtgagctggtttcgtatcgacaagaaaaagaaaagaaaagaactgattgaagagctatgctctaatgcaagtaactcatgatacttgccaccttttgtttatgatgcagggaaaaacatgttagtattccagttcatcttgcaccgcccaaagcgtgtcctgcattggaaacaccaattttgactgccagtttgctatcttatttatttctggttttatagtatacatcagttcgatcttaacttttctgatcgatgaaatgtgtgctccgaaatgctttatgagttcaactcaaatcgcatgataattccgctgttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0411000, RefSeq:Os03g0411000