Difference between revisions of "Os03g0593200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0593200| Description = Protein of unknown function DUF21 domain containing protein| Version = NM_001057123.1 GI:115453974 GeneID:4333362| L...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0593200|
 
GeneName = Os03g0593200|

Revision as of 19:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0593200

Description

Protein of unknown function DUF21 domain containing protein

Version

NM_001057123.1 GI:115453974 GeneID:4333362

Length

8085 bp

Definition

Oryza sativa Japonica Group Os03g0593200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:22781680..22789764

Sequence Coding Region

22781680..22781703,22781742..22781921,22782599..22782715,22783609..22783674,22784854..22784945
,22785186..22785249,22785360..22785438,22785510..22785649,22786515..22786596
,22786827..22786834,22787267..22787365,22787470..22787547,22787641..22787734
,22787988..22788085,22789189..22789764

Expression

GEO Profiles:Os03g0593200

Genome Context

<gbrowseImage1> name=NC_008396:22781680..22789764 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:22781680..22789764 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgccttccacctccacggcggcgctgctgctcgccagcgggaggcacccgcggcaacagttccagtccctccgcgcccccaccaagccccccttccacttcccccacctcctcctcccctcccgctcctcctcccgccgctgctgctgcgtccccgtccccgcccccggggcgaggtcccgcggcctgcccgctcccgtatccgcctccgcgctgcccctgcgggtgacgcctccgcccggggtggaggtggagggtggcgtggggagggcggtggcggcggcggcggcggtgaggagggtcgcggtggcgctggcgtgcggcgcgcttgcggcggcatggtgccaccgggcgctcgcggtggcgggggcggcgggagccgcaggggcatctggggcggtggaggcggcggctgggtttggcgggatggcactgcgtggtggctggccgagggtgctgcagattctgcagctgcttagagagcaggggattattctcgctgtgttgcttggcctctcggcgtttttctccatggctgagacttccatcaccacgctatggccttggaaggttcgtgagttggctgaaaaggaacctgaaaatggtgttttcagaatgctccgaagtgatgttactcgcttcctgacaaccatactcattggcacaactgtggtcaacattggcgcaacagcaattgttactgaggcggcaactgcaatgtttggtgaagcaggtgtcagtgcagcaacaggcgtcatgactgtcgccatcttacttcttacagaaatcacacccaaaagtgttgcagttcataatgctacagaggttgctaggtttgttaccagttgcatggctttcattggtcctgtatccagttgggcgaattgtcacttttctgtccatggggatgctacagattctaggcctgaagggaagaagaactcgagtgaaccatatgttactgaggatgaactgaaattaatgttacgaggtgcagagttgagtggcgctattgcagaagacgaacaggatatgatcgagaatgtactagagataaaagatacacacgtcagggaggtaatgacgcctctggtggatgtagttgcaattgatgctaccgcaacactgattgatttcaaaaacttatgggaaactcatcagtactctagagttccagtgtttgaggaacgcatagataatattgttggaattgcttacgccatggatatgcttgagtatgttgaagaggttgagaagttgaaggagattactgtgaaggaaattgcacatatgcccacatactttgttccagattcaatgtctgtttggaacttgctaagagagtttcgcatcaggcaggttcatatggcagtggtcctcaacgaatatggtgggactattggtattgtaacattagaagatgttgtggaagaaatagttggagaaatcttcgatgagaatgattcaaaggaggaaatccagaagaaaacaggttatatagtgatgctggatgacggaacatttgacgttgatgcaaatacatcaatagaccacctatctgaagaacttggtgttaaaataccagagggtcatcagtatgagacggtgtctggttttgtctgtgaatcctttggttatataccagaagaaggtgggaaaatgctagttatactcgaaaaggataacagagaagaaaatgatgaatataaagaagaaggatctgataaccaagatgataaagaaagaactcaggcttatgaacttgagcagggtcagacactaggtctctag</cdnaseq>

Protein Sequence

<aaseq>MSSPSTSTAALLLASGRHPRQQFQSLRAPTKPPFHFPHLLLPSR SSSRRCCCVPVPAPGARSRGLPAPVSASALPLRVTPPPGVEVEGGVGRAVAAAAAVRR VAVALACGALAAAWCHRALAVAGAAGAAGASGAVEAAAGFGGMALRGGWPRVLQILQL LREQGIILAVLLGLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRMLRSDVTRFLT TILIGTTVVNIGATAIVTEAATAMFGEAGVSAATGVMTVAILLLTEITPKSVAVHNAT EVARFVTSCMAFIGPVSSWANCHFSVHGDATDSRPEGKKNSSEPYVTEDELKLMLRGA ELSGAIAEDEQDMIENVLEIKDTHVREVMTPLVDVVAIDATATLIDFKNLWETHQYSR VPVFEERIDNIVGIAYAMDMLEYVEEVEKLKEITVKEIAHMPTYFVPDSMSVWNLLRE FRIRQVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMLDDG TFDVDANTSIDHLSEELGVKIPEGHQYETVSGFVCESFGYIPEEGGKMLVILEKDNRE ENDEYKEEGSDNQDDKERTQAYELEQGQTLGL</aaseq>

Gene Sequence

<dnaseqindica>8062..8085#7844..8023#7050..7166#6091..6156#4820..4911#4516..4579#4327..4405#4116..4255#3169..3250#2931..2938#2400..2498#2218..2295#2031..2124#1680..1777#1..576#atgtcgtcgccttccacctccacggcggcgctgctgctcgccagcgggaggcacccgcggcaacagttccagtccctccgcgcccccaccaagccccccttccacttcccccacctcctcctcccctcccgctcctcctcccgccgctgctgctgcgtccccgtccccgcccccggggcgaggtcccgcggcctgcccgctcccgtatccgcctccgcgctgcccctgcgggtgacgcctccgcccggggtggaggtggagggtggcgtggggagggcggtggcggcggcggcggcggtgaggagggtcgcggtggcgctggcgtgcggcgcgcttgcggcggcatggtgccaccgggcgctcgcggtggcgggggcggcgggagccgcaggggcatctggggcggtggaggcggcggctgggtttggcgggatggcactgcgtggtggctggccgagggtgctgcagattctgcagctgcttagagagcaggggattattctcgctgtgttgcttggcctctcggcgtttttctccatggctgagacttccatcaccacgctatggccttggaaggtgcgtctaccaactatcaagtgccatgatacaaatttgttacacaatgtctaattgttgcgtaacatcacttcactggttgaaaatttgttacacaatgtctaattgttgcgtaacatcacttcactggttgatggttgtaacataagtctagctagatcagtgattgtgcgcaactgggcatgatgatgaaaatgatagtatttggggtttaattttaaaatttccatggtgaattgagccatttaggtaggaaggacacgagtttacatgaggaaggtggaagccgtataaaaacatctctgatgttggttttgagtgttgacgggtgggtactaggccattaggcattactcaacaaagggagattatgtgcatcagatgaacagtttgtgcaggggcttagttgcttcctgtgctggtgttgttgcatgatcctgagctggtactgaccctgtaaatatttaccagctcccaaagtttcttttgatgtatttatggtttgaaagaaatacatacagtacacaccatactaacatatgcactacttcaaactggatgcatgcactgatacccctgtaattgtcaggggaatgtgcactgtcacagtgtcactgactgcccatgctaattcttattattttctttgtcccaacaaacaattagtgttcatccagtggtaggtcaagttatttgcacattttaagtttagtgcggctttatcttcattcttcaggatcatgatttaagctctaggttcaggtttagtaggtaataacattaatttaacattgagttttaagcttctgtaataatttagttgttacaatttggtctttgtgtcatcgtctcccaaatcagcatgctttggatggacaaaatttaattgaatccattagcaaggcatatgaccatactattgagtccatagtttcatgtgtgcatctctgctgggattatagtttgacataacatcttttgttgttccatggcaaatgcataagtccccaccttgtttatcatccattaaaccctgttggttgatggtagtccttttcatgtctaaacaattgatgcttagatttggttttctgttccactaggttcgtgagttggctgaaaaggaacctgaaaatggtgttttcagaatgctccgaagtgatgttactcgcttcctgacaaccatactcattggcacaacgtaatttattaaacctatgtgttctgccatgtttattatattttttttctataatccatattatgtcattgagttcaatccatacccacaatatgccactcactgtgagacaaacttttggccttttgggtcttggaaccacacatttggagatgccagtggtgtattgtggacattgagtgtaattcagtggcataaattggatccctccttattattttcttcctcacactggaatacttctgtatgaaagtgtggtcaacattggcgcaacagcaattgttactgaggcggcaactgcaatgtttggtgaagcaggtgtcagtgcagcaacaggcgtcatgactgtatgtcgtctcttttgcactgatctactcataataaaaaatgttctcttatgtttatatgacgtctaactgtggagccccaccttttttcaggtcgccatcttacttcttacagaaatcacacccaaaagtgttgcagttcataatgctacagaggttgctaggtttgttgtaaggtgagacagatgtaagcaggacttagtttcaaatatttgttgaaatagcctgcttgttaatacgatgtttaatgctgtatatctattgtaatgtatcagaccagttgcatggctttcattggtcctgtatccagttgggcgaattgtcacttttctgtccatggggatgctacagattctaggcctgaagggaagaaggtaggcatacataatactggcatttaatgtatattttctgcttgtgtagcattgttaattgttgttcttgattaactgagtaaccaaaactttaaaaatatgagtagcgtgtccttcataaacaactccaacaggttacaaaaagcttcttccttcatattttgctattggtgttaaaggtaactaggcagggatgtgaacggcatgggtggttccacaaaatatgcaccaatataaaaagccaagtcgatcaaactcatgtacaacaaggattcaaatatggattaaccgaataggtggttatcagttatcgtaagtattggatatttatatactatatacacaactatcactatgatggatttggattcaactgtatattttgaacctaatatctgtatgtgtattgttgtgcaatttaaacatgttcagaactcgaggtgtgaagatttttaaataatcatcagattttttttaaaaaaaattggtagggtagagttgataatttgtgtttggattggcgccaataagaaacaaatttatgggtaatgctgaaacatttggtagggcaaacttttgaggggatgtttggtacggttgcaaaccaaaatggacgtacattttttaaggacacggaattctgtgtgttttacacaattttttttttcagtgaaccatatgttactgaggatgaactgaaattaatgttacgaggtgcagagttgagtggcgctattgcagaagacgaacaggttagataatatcacaataatttcatgtatatattttgcttacctatgttgttgtttattgccttgattattattaattttgtgaatttgacttattttttgtatactggccagtgtgtgcacttgttactggaagtttattttcgttattgatgtccatttgtactttgaattggagttgctatgttgaagttttactgtttgaagtggtaaacaccaaacaccatgatataccaaaaggatgttatttagctattttcataatatgtgctagatcattgcgctttctttcctgggaatgcacaaaagacttgcacacctttatattaaggagtaaagttgacacaacaccctgctgcaaaacaacaggctgatgaaaagaaaaaacacagaaacactaggcaactatctgatcacaatgtgttctttttactattgtaccatcagatggtaaccttttatatgttttaccatggggctcttattcatggcttggaaagctttccggtggtgattgcatttaataaggtttatgtaggcaactttctagtacatgcatattcatccgttctgcattgggagttctcattctacactgctctttgtcaaaggattgtttaatcttgagttcactgacataaggaggcaataaatgttctcattatctattattatttcttctattgaaatgctccgaaagaacgcttcaaaaagtaaagttagatgaacacaaagatataggtgcaatatgttttctgtatttctgtattgtactattcagaatttctgatccatccctgcttgtactgaactcttagctagttattcttgatcagctaaattcaatgagtgacatttgtaacaggatatgatcgagaatgtactagagataaaagatacacacgtcagggaggtaatgacgcctctggtggatgtagttgcaattgatgctaccgcaacactgattgatttcaaaaacttatgggaaactcatcagtactctaggtatctcagctgtgaacttttagtatgcatcttcaattcttgttgttgacatgtgcagctcttacttccagagttccagtgtttgaggaacgcatagataatattgttggaattgcttacgccatggatatgcttgagtatgttgaagaggtctgtctcttgtttaccatttgaatttttaaagtagaaaaggatgagtaggtgactcttatttgttcggattaaggattttctgaagaaagatgcattttgatttgaaggttgagaagttgaaggagattactgtgaaggaaattgcacatatgcccacatactttgttccaggtaaactttcacgaatgatactcattacaaaaatgtccattgataaatctaaaggcagatacagaacattacaagtatttgagtactgtcctttttcagcatccatctaacctatttattttctatttcaatggattttttcaaatccagatttgtgtagggcattgcattctttatgtcttaatgtttcctctggtccacatgtcatatatgtaaaaatgtgatattttgtcttgacagattcaatgtctgtttggaacttgctaagagagtttcgcatcaggcaggttcatatggcagtggtcctcaacgaatatggtgggactattggtgtaagattttattaaccaatcctttgttccttgtactttctcaaaatagaattgactttctacttatagttcttattattgattccatttatcattggttatttgaaggggatcttttaattcatatttggtcaaataactggaaattcaatatttttagctcaacttagacacctttgctctttcatggtttgttgttcgataggaaaatcattttgttctctccaatctgcacagttcagtttcacctggtttctctgaaatataaaaataaagattgttttctcttttgttttgaacaaaacaccccagaggagtcctctgctgttatatgaagatcttttttttgttttgcttcacgaatttgttatattataactaatgattagatgttccaaactagagtagtatccaaaccaagaaagcaagaataaaatggactgtagtattcacaatctagctgacaaggcaagaataaacaaaatgagggtgtaacagggatgaaccaacctgattgcagaaagagggcaggttctggtttacgtgacagtaactgcctgactgtagttggttttatgaaccttgcttgccagcattttgatgggacagtgagtggtctgtatattcggaaccgcagatgtgtggcaatatttggagggaggattgacaattttccacactcatctttggcaattgaggattttccactacatatatccttgtcccacatgtcatatcagtggcaaattctcaattgccaactatcaggagtggcagagccttgtatcccaatattattgacattatttttaggttgtgttatatatccatagtttattgtcaatttttatatgcaaatacctcttgcaagttgtagggtcaaacgtgtttactctttacaacgatctgaaatcaaaatcattaaacatctttacagcacaaatacattcagcaactattactctatattgtacttgttgggaattaaacatgccttctggatgaaactcagttttattgtaaggtttcctatttcattaaataattattcacactcttgcaccagctttgtcctatgttctgtgaataatcagaaacagcttctgttcattacttatcccatgcatctcttactttcggaagtctctctgactagtgactactgctaaaaaattgcagattgtaacattagaagatgttgtggaagaaatagttggagaaatcttcgatgagaatgattcaaaggttggctatttcagtggtccttttgatttaaattttacaattcagagtctaatgccatttaccacacgctgtatggaagtgatatttgatttctgcttttcttttctctgatcacactaatccctccatctgtgtagcaaatcaaatgctaatcatcttgtataaggatttcatgagagaaagaaaacttaagcacacgtgctattatgactttgtgaacattcttataatcactgcagtagtacaactttcaagctcttagtatttatgtgtttgcattgtcttaagagttagtgtgttccataattagccttattaattagatcctggtcagttacatcccggtttgatggaaatcatccagcaactatctagtgccaattcttataattaatactacctccatcccaaaatgtttctatttctagcacagtacattgtcccaaaatgaatctatttctccacctacctcctcaaccaatcacaaccattctccttcacctactttctcttttcaaccaatcacaacctttcttcaatcattcccacctactttcctaatgcttgtgccaatctaaacaatgcttacattttgggatggaggaagtactatgtaatggtgggaatcaactggcatcatgaagaatcattctgaattaacataactcaagagtatcataaaaacttggcattgaagttgtcaaactggcagggatgaagtgctctgcctctgctactgtttgagctataactgcctgattcttgccagttctcttagttttaagtcataacaacatattgcatttagtagaccatgatccattttgctactcttttgcttaagtagacagttgtacccatttccttatgctactatgtttttacctttgcaggaggaaatccagaagaaaacaggttatatagtgatgctggatgacggaacatttgacgttgatgcaaatacatcaatagaccacctatctgaagaacttggtgttaaaataccagaggtgttatttcttgtttggtctttgctttttctacagttgctgtttacttctacagtcactataagtgttattttggacattgccatggcaatcaaattggaatcttggtcaccaacatatcttgaaaatctagcaaaaaatattatattttattttccaaggcaaaatcatttatatgatcgttataaataatattcaaataatttaactaaatgttcccatggtgacacatttctcactggagttaactatatgtgctccaagggtaaataaatgcattttccacatatcatatgcaacttgatatattcgaatcagttcatcccatatttccatatgtaaggcctatctcctgtggctgttccttcttattcttgaatatgaaatcctgttaatcattataatatcaatttcaagagttatcttgaacacatcaagtttgtctcgagctaattcctgaggattgagtgcttcttcatttacttaacagagctgattgagtgctttgagatttcttctgaattgtcaataacacatcttgctaggtgttagctttagaatgatatatgccacttggcttatattaagcatagttttcttaagtggaatgtgctactgcaatcaccatatgctggatatgaggttcacttggaatttggaaatgcatttgtttgcagggtcatcagtatgagacggtgtctggttttgtctgtgaatcctttggttatataccagaagaaggtgggaaaatgctagttatactcgaaaaggataacagagaagaaaatgatgaatataaagaagaaggatctgataaccaagatgataaagaaagaactcaggcttatgaacttgaggtaagtggtacaatcctctgtttacaatttgtttgcagcagggtcagacactaggtctctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0593200, RefSeq:Os03g0593200