Difference between revisions of "Os03g0626800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0626800| Description = Calcineurin B protein| Version = NM_001057239.1 GI:115454206 GeneID:4333502| Length = 6731 bp| Definition = Oryza s...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0626800|
 
GeneName = Os03g0626800|

Revision as of 19:39, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0626800

Description

Calcineurin B protein

Version

NM_001057239.1 GI:115454206 GeneID:4333502

Length

6731 bp

Definition

Oryza sativa Japonica Group Os03g0626800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:24648935..24655665

Sequence Coding Region

24649294..24649414,24649560..24649642,24649768..24649827,24650086..24650194,24651225..24651277
,24652578..24652658,24653593..24653705,24655153..24655210

Expression

GEO Profiles:Os03g0626800

Genome Context

<gbrowseImage1> name=NC_008396:24648935..24655665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:24648935..24655665 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgcagtgtctggagggggtgaagcagctctgcggcgtgctactcaagtgctgcgacctcgacctcaagcagcccaaggggctcgaggatcccgaaatcctcgccagggagaccgtctttagtgtgagcgaggttgaggcgttgtatgagctgttcaagaagatcagcagcgcggtgatcgatgacggactgatcaacaaggaggagtttcagttggcgctgttcaagaccaacaagaaggagagtttatttgctgaccgtgtatttgatttgttcgatacaaaacacaatggtattttaggattcgaagaatttgcccgtgcgctctcagtatttcatccaaatgcacctctcgacgagaaaattgacttttctttccagctatatgacctcaagcaacaagggttcattgaaagacaagaggttaagcaaatggttgttgcaacacttgctgagtcgggaatgaatctttcggatgaagtcatagagagcatcattgataagacatttgaggaggccgacacaaaacatgatgggaaaattgataaagaagaatggcgcaatctagttctcagacatccttctttactgaaaaacatgacactccaatatctcaaggacatcacaactacatttccaagctttgtcttccattctcaagtcgacgatacttga</cdnaseq>

Protein Sequence

<aaseq>MLQCLEGVKQLCGVLLKCCDLDLKQPKGLEDPEILARETVFSVS EVEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILG FEEFARALSVFHPNAPLDEKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSD EVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVF HSQVDDT</aaseq>

Gene Sequence

<dnaseqindica>360..480#626..708#834..893#1152..1260#2291..2343#3644..3724#4659..4771#6219..6276#aaaacacacacaaaaaggggaagaaaatcacgcaaagaaagggaaaaaaaataactcgaagagtccgttttttcttcctcctactcgccccaatccaatccactccaccgtaccactcgccgccgccgccgccgccgacgacgaagccggcgccgccgccggagccgatcccccgcgggcccaccctcctacttcgcgcttcctcggccgaaatccctaccgggtcgaatcgccccgcggcgcgccgctgatccgcgccgccgcgccctagccatcccggggacgggcggcggctgctgctgctgctgccgatgcatggttggtggtggcgggtaggtgagtaagagagtaggcgtaccatgttgcagtgtctggagggggtgaagcagctctgcggcgtgctactcaagtgctgcgacctcgacctcaagcagcccaaggggctcgaggatcccgaaatcctcgccagggagaccgtctgtacgtcctctctctctctctcgcttgctcgtgcagtgtacttgagtgtcgattgtttcacttgaactgaaattaattgtgttccctttttgtttcgcggcgcatgtggcattgggggtggtggtctgctcgtttgtgcgtgcagttagtgtgagcgaggttgaggcgttgtatgagctgttcaagaagatcagcagcgcggtgatcgatgacggactgatcaacaaggtcagtgggctaataatgcccatctgttcaactgaaaaaggatgtcgtttgttatgatgatttcatgattcttatgttatatggccctctgggggttgtgatcattttgggttggtatggtgcaggaggagtttcagttggcgctgttcaagaccaacaagaaggagagtttatttgctgaccgtgtaagaccaacaataatataacttgcctaccatggaaaatatcctgtaactgtctacatttgaagtgaaatcaattatgaaattagtttggttatgctctgtagcatcttgatgatgctatacattgtccaaacaatcaatagagaatgatgttgctgcataatttgctttctgctaacatcagtcaaacagagaatgatgttgccacataatttgctttctgctaacaacgagtgcatttctttccctgtcttgcaggtatttgatttgttcgatacaaaacacaatggtattttaggattcgaagaatttgcccgtgcgctctcagtatttcatccaaatgcacctctcgacgagaaaattgactgtaagtgtaaatgcatctgggtgggtagcttaactacaaaatatagcgccttactgatagggaagtctataacctaaaaatagaaaaggacacatctatggttgaaaatagataatgatcacttaacataatgcaacatgctcatatgtgacaaatgctactacctattatgtactttgcaagtttccttaaaaccgcaatgcatagattcagcttgctctaattgcataaatagtaactgttcatactaaggaacaaattaaaggctagaaaggcacagtttaactacaaataagaacactcatgcttttttctttttttctttttggtctagtctcctttgtgctggatgtattaattgtttggctactgacagtggctgacaaaatttcacaattagacaaatgggaaagtactacatggtgctacagttaattcacattatgcaaacatgtactgtagcatcttagcattaaccgaaaagaagctcatagttatatattgtgcaatgtaaactatagcatgtgagatatcctaccattttgtctatctgatttctgtttaaatcatgtaatttttaaccattaccgcttgtcatgtataatatacacgccttcataccatgtggagccagcaaactatatttaatgtttaagttagccctcttatttacttgatcctctgacatgtattatgcaattcatttttgtgccatctcaatggatataagactaaaatgcaacaaaacaaacagttcacaatatccctgagatcagacttaacacctgtattttatttaccctttttgggttattttgtgctgatccgagagtggtctttattggaagaaatgttaactaggggtgttaatctctctgcttggttgataatgcatcgctatgcattgaaataaaccggttgcatgttttattagcatatgttatgccctttttttttctgtgtctcttgcttttatcttcaatgttgtgtgtgaaaagaaattcttgcattaactcaataatccttgcagtttctttccagctatatgacctcaagcaacaagggttcattgaaagacaagaggtacttctctaatcagcatgttatgtttctctcataaaagtcagcatgtagtatgtgtgaaggtaactttacaattagagtaaatttcatattggaccatcgttttttacccatgttgcaacttggaccagggctaaactactttggcctagtactcttacaaaatatttcaccttaggccctgttcttcttcaactctccttcctctcttcttcctctctttcctctcatagagccatgtgtgccatggcccatggcagatctaatcagcactgctatgacctgggcatacagatcaaagctcaagctccatccacaagccatccctgtgctctcgctagttcttctctgatggaaaaaaaaagaggaagtgaaaggtcactgtgtgctgctcgcttcctggcaaggtgcctcaaatttcctgcacgcagtgcctctactcactggctattggggctgccatcttccatggaaagagagggatcccattggtgttggtagagctctcaccagcctcaaccaagatgctgtgcgctcaagcttgagcaccggccgcacggcctctatgggtgttaatctggcactcgagctcaaatccattctttgttggtgagcccaagatcctcgagctcctctgcctttggctgcgtcgctgacttgctggcatgggaggctcaccatcgtgggtgagttgacggagaataagactggcggtgaattaggatcggagaggactggggtatcggtcactgccatgcgggctaactagtccaaggtgcaaaggttggtaagaaaacccaatcttaattgaaaacatcttcaattgcatagtccaatatgcaatttaggtaataaaaattagtccaaagttcaattcactcttttaattatgatcgtaccatttaaaagtcccgctattggctagtatgctggaaaaccaaccagatgccagctcattttcttctgcaagacctcccctcttctccctttgcattttttttacattttttatgggtgctttcattgtcttctctattcactaatgatcatgtattatgaaaaatgctatggaactaacccaattcaaggctacttgtggccatatgcctccttgtggttaccctagcaccactttcttgagcagcgaatagcatagttcaaagtttgtgttcagtgtaattgatatatgtgtaaaatatttgtgtcataactcagaataccatttgccttctgcagataatgcaactgatcttctatcttttttatgttatacttaattgtttccttttttgcctattaggttaagcaaatggttgttgcaacacttgctgagtcgggaatgaatctttcggatgaagtcatagagagcatcattgataaggtaaacatgagttgtttacttcaacgtatcaatctggggatagttttttcatgatcatttaatcaatcatgatgagcatcattttccctttttatgctctcgatatgctgatgcaagtaccacacttgtttcaacttatgaacttatactctgaacatgtttgtctctacaatgtgtgcttgcaaatggatattgctttagctagtggcactcctagtgtcatttatgttgtgttttgcaaatcatagttaagtcttactgccaaagctttgtattgacatcttttgcagaaatatgatatatttatagcagtgttgagcaatcttactaagttgccacaaacacaaaaattgtctgcctgataacacaatttatatttggacctacaattgtgatgctacatcagtactcctaaatggaaatatagttatatgcacatatgattgcagcggctgtagtatgtatatcttattaatttacatcattattagactcatcgtgtttttttgaagaagaaaatctagccataccaaaataagaattatcaattcttttattttcgttcgtaactaatgagatgatttacagttacttttttagtcttagtcttagtacgactcctttcaagttttgcatttatattttgtcacatttttcttttgtgaggcacaatggttaaactatccataaatgtaatattttctgttaaccttctggtttctggtaactgggcatttatttgatcaatcatacaaagtgatattttcattgttttgccaaatccagcgtggatcaggccagcccactggccacgctatacaggctttgttgctaattgctacctttgtacattttacaaactgactagttgctgtgattgtttatattattctggctgtttatattattatgtttatattgcacattttacaagacatttgaggaggccgacacaaaacatgatgggaaaattgataaagaagaatggcgcaatctagttctcagacatccttctttactgaaaaacatgacactccaatatctcaagtaagatatgttaaacttgtctgtgtatttctctatttgcaactgatgatcatttacgtttctcccatctggagctatatcataggacactattgcattttgagttatggcaagaagattaaaatctgtatggctcacaggttgctcttgagcgaaggatactagagactatttgcgaatattattcctaaattactagtacagtatcttagttgtaaacagaatatgaaacagcatggattatctagatgatatttgaatacagtgaaaatagtatgctatcccagagcattggtttttaagttcttattagtggttcagattcaacgaagccagtttgtggtcagcccctgattcaaaaggatatattaaagcatctgttgtcggtatttcagaatttgtcttcctgtggagggacgcaaaatataattttacacgtacagtattaaataccacaaaactgtacatattctggacaaactaatgtttttatttcacaaaattacacataatttggtaggacattttgtgaaactacgtatttggtgattttattaaatatgatagaatctaaatgcggaaccacctatcagacaacatatgtgtaattatggtcatggtgtagttttctgataatgttacatgtgtatgtataatgtatttctccaaagtttactcctgcgtatgtgctatgcatgcatttttagactcttaacttgttattaaaagatgtggacagggttgtttcacaacaagtagccagggcttaatatatgatgttaaaatcttcagttgtacataaaatagagaaattgttctacctagaaacttacctattttttttgacttgtgctttggtagggatttcccttcttcgtttctctgattgtagtttaacttcaattgctatattgtcaacttcggttacaaacttttttgaattttcgttttcatttttgtgcagaaaatttaaatttagataattccacaaagtgattgttaattttggttgtttgtgttgctaaatataacttgagaacttctcagttttatgatatgttttaaattaatactactaattgctttttaccacatttcagaaaacacatattttgttaaacctatcaaaaactgtactctttccaaaatcacacatgtttctcactgaggggtaggtctcagcacaccatccacacatctaggtggatttcacatgttatgtttgttggcgtttaccatgaatcaacaaatatttagtttacttaaatgttttgcaattaattctttgaaacacagactgaaataagtattctgatagctaatgtcaaataggtgtatttttgtgatgatttagtctggatactttttttcttcctattttacttcgattgctctttggttactccatttcacagacctaagtacctaaccatatcaactttggcagggacatcacaactacatttccaagctttgtcttccattctcaagtcgacgatacttgaaatctgagaatttccccctccaatggaatgccagaagacagtctcgttgcttttgaggctttgcaatgagtagtttttggttcagcacttcatctgaagccataaagttccagagatgatcacatattgcagtggagaaatcaaacatttccgtattgttaataatagttctttttcttgcttttagccggtgtgtgatatctgtctcaagtttcttttccctattttctgtttttttttctttctgttggtttattggttagtagtcgatctaattgtttgaagaaacctccgaccgtgtataaagcttccttctagtgaactgtatttaagtcaggaagttttctattgtatattgcagattaattgaatggctcaggaattccctagttgatttttaagtgttttaccgtctgaataataatattttacaatcagatttcgatattgtattt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0626800, RefSeq:Os03g0626800